BioCyc MetaCyc EcoCyc HumanCyc BsubCyc YeastCyc Algae and Cyanobacteria Helicobacter pylori Listeria monocytogenes Mycobacterium tuberculosis Peptoclostridium difficile Pseudomonas aeruginosa Salmonella enterica Shigella flexneri Vibrio cholerae
Information Academic Licenses Commercial Licenses
Login/Account Help Searching Intro to BioCyc Website User Guide Webinars Glossary PGDB Concepts Guide Guide to BioCyc Contact Us/Licensing/Support
Current Database:   
Search in Current Database: 
Summary of MetaCyc, version 26.0
Tier 1 Highly Curated Database

Authors: Ron Caspi1, Carol A Fulcher1, Anamika Kothari1, Markus Krummenacker1, Mario Latendresse1, Suzanne Paley1, Pallavi Subhraveti1, Peifen Zhang2, Sue Rhee2, Hartmut Foerster3, Lukas Mueller3, Peter D Karp1

1SRI International, 2Carnegie Institution for Science, 3Boyce Thompson Institute for Plant Research

Summary:
The MetaCyc database contains a collection of metabolic pathways and enzymes from a variety of organisms. MetaCyc is curated on an ongoing basis.

See the MetaCyc home page for more information.


Citations: [Caspi20]

Genes:14,544
Pathways:3,006
Enzymatic Reactions:17,780
Transport Reactions:844
Polypeptides:16,310
Protein Complexes:4,657
Enzymes:13,698
Transporters:613
Compounds:17,956
tRNAs:8
Growth Media:19
Protein Features:30,599
GO Terms:69,426

Copyright © SRI International 1999-2022, Marine Biological Laboratory 1998-2001, DoubleTwist Inc 1998-1999. All Rights Reserved.

References

Caspi20: Caspi R, Billington R, Keseler IM, Kothari A, Krummenacker M, Midford PE, Ong WK, Paley S, Subhraveti P, Karp PD (2020). "The MetaCyc database of metabolic pathways and enzymes - a 2019 update." Nucleic Acids Res 48(D1);D445-D453. PMID: 31586394

Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 46(D1):D633-D639 2018
Page generated by Pathway Tools version 26.0 (software by SRI International) on Wed May 25, 2022, BIOCYC15.