# This E. coli expression dataset was provided courtesy of # Prof. Tyrell Conway from the University of Oklahoma, and # is described in Tao et al, 1999, J. Bact., 181:645. # # Users will typically want to display the ratio of the 12 and 13th # columns, i.e. since the first column is numbered column zero, display the # ratios of columns number 11 and 12. # # Columns of this dataset are: # GlcVol1a GlcVolb ratioa/b loga/b GlcLBa Vol GlcLBb Vol ratioa/b loga/b MinGlc Avg Vol GlcLB Avg Vol Min Glc Pct Glc LB Pct Array Pos F2 Field Spot Glc Min/LB Ratio Log Ratio GeneM53 b# M53product Functional Group M53 function # # b0001 2967 3166 -1.07 -0.028 1364 1253 1.09 0.037 3066 1309 0.018094 0.007880 E7 4 2 1851 2.30 0.361 thrL b0001 thr operon leader peptide Amino acid biosynthesis leader; Amino acid biosynthesis: Threonine b0002 3161 5195 -1.64 -0.216 2066 2066 1.00 0.000 4178 2066 0.024651 0.012439 G7 4 2 1852 1.98 0.297 thrA b0002 "aspartokinase I, homoserine dehydrogenase I" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Threonine b0003 12621 15198 -1.20 -0.081 11863 11826 1.00 0.001 13909 11845 0.082076 0.071311 I7 4 2 1853 1.15 0.061 thrB b0003 homoserine kinase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Threonine b0004 7517 9300 -1.24 -0.092 4800 4821 -1.00 -0.002 8408 4811 0.049615 0.028963 K7 4 2 1854 1.71 0.234 thrC b0004 threonine synthase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Threonine b0005 3982 4287 -1.08 -0.032 1903 2141 -1.12 -0.051 4135 2022 0.024397 0.012175 P15 4 2 2656 2.00 0.302 b0005 b0005 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0006 315 528 -1.06 -0.024 482 428 1.00 0.000 421 455 0.002487 0.002740 B17 4 2 2657 -1.00 0.000 yaaA b0006 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0007 2165 1788 1.21 0.083 641 781 -1.22 -0.086 1976 711 0.011662 0.004282 O14 3 1 632 2.72 0.435 yaaJ b0007 inner membrane transport protein Putative transport proteins "putative transport; Transport of small molecules: Amino acids, amines" b0008 3363 5705 -1.70 -0.230 4938 5513 -1.12 -0.048 4534 5226 0.026753 0.031462 P2 2 1 1256 -1.18 -0.070 talB b0008 transaldolase B Central intermediary metabolism "enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b0009 7400 5193 1.42 0.154 5886 5371 1.10 0.040 6297 5629 0.037154 0.033887 G18 4 2 2276 1.10 0.040 mog b0009 required for the efficient incorporation of molybdate into molybdoproteins "Biosynthesis of cofactors, prosthetic groups and carriers" "transport; Biosynthesis of cofactors, carriers: Molybdopterin" b0010 1858 1177 1.58 0.198 1310 1564 -1.19 -0.077 1517 1437 0.008952 0.008649 D17 4 2 2658 1.04 0.015 yaaH b0010 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0011 2317 2181 1.06 0.026 1482 1394 1.06 0.027 2249 1438 0.013272 0.008658 F19 1 2 2379 1.53 0.186 b0011 b0011 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0012 1501 1374 1.09 0.039 1044 1007 1.04 0.016 1438 1026 0.008484 0.006175 F1 4 1 1059 1.37 0.138 htgA b0012 positive regulator for sigma 32 heat shock promoters Regulatory function "regulator; Adaptations, atypical conditions" b0013 1902 1844 1.03 0.013 573 1042 -1.82 -0.260 1873 807 0.011053 0.004859 F17 4 2 2659 2.27 0.357 yaaI b0013 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0014 11956 14178 -1.19 -0.074 17228 15065 1.14 0.058 13067 16147 0.077106 0.097211 H1 4 1 1060 -1.26 -0.101 dnaK b0014 chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins Cell processes factor; Chaperones b0015 3059 3625 -1.19 -0.074 3363 3614 -1.07 -0.031 3342 3488 0.019719 0.021002 J1 4 1 1061 -1.07 -0.027 dnaJ b0015 chaperone with DnaK; heat shock protein Cell processes factor; Chaperones b0016 5779 4737 1.22 0.086 4531 4226 1.07 0.030 5258 4378 0.031027 0.026360 G5 4 1 308 1.18 0.071 yi81_1 b0016 IS186 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0017 3171 3726 -1.18 -0.070 1961 1950 1.01 0.002 3449 1955 0.020349 0.011772 H17 4 2 2660 1.73 0.238 yi82_1 b0017 IS186 & IS421 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0018 3549 3682 -1.04 -0.016 2189 2365 -1.08 -0.034 3616 2277 0.021334 0.013710 L1 4 1 1062 1.56 0.192 gef b0018 Gef protein interferes with membrane function when in excess Cell processes membrane; Cell killing b0019 2520 2614 -1.04 -0.016 1260 1072 1.17 0.070 2567 1166 0.015146 0.007019 A16 3 1 633 2.16 0.334 nhaA b0019 "Na+/H antiporter, pH dependent" Transport and binding proteins transport; Transport of small molecules: Cations b0020 1035 1114 -1.08 -0.032 664 753 -1.13 -0.054 1075 708 0.006342 0.004265 C16 3 1 634 1.49 0.172 nhaR b0020 transcriptional activator of nhaA Regulatory function regulator; Transport of small molecules: Cations b0021 655 615 1.07 0.028 738 673 1.10 0.040 635 705 0.003747 0.004247 I5 4 1 309 -1.13 -0.054 insB_1 b0021 IS1 protein InsB "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0022 13277 12605 1.05 0.023 7910 7879 1.00 0.002 12941 7895 0.076363 0.047530 K5 4 1 310 1.61 0.206 insA_1 b0022 IS1 protein InsA "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0023 7269 6930 1.05 0.021 26118 27613 -1.06 -0.024 7099 26865 0.041891 0.161743 I9 2 2 1669 -3.86 -0.587 rpsT b0023 30S ribosomal subunit protein S20 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b0024 832 1550 -1.86 -0.270 897 1026 -1.14 -0.058 1191 962 0.007027 0.005790 J17 4 2 2661 1.21 0.084 b0024 b0024 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0025 624 969 -1.55 -0.191 437 703 -1.41 -0.148 797 570 0.004701 0.003432 M19 2 1 175 1.37 0.137 ribF b0025 putative regulator Putative regulatory proteins putative regulator; Not classified b0026 7795 9019 -1.16 -0.063 20992 21803 -1.04 -0.016 8407 21397 0.049606 0.128823 K9 2 2 1670 -2.60 -0.414 ileS b0026 isoleucine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0027 719 5 1.44 0.158 629 306 1.26 0.100 362 467 0.002136 0.002814 E16 3 1 635 -1.00 0.000 lspA b0027 prolipoprotein signal peptidase (SPase II) Cell processes "enzyme; Protein, peptide secretion" b0028 2642 2459 1.07 0.031 2156 2154 1.00 0.000 2551 2155 0.015051 0.012972 L17 4 2 2662 1.16 0.065 slpA b0028 probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase) Putative factors putative enzyme; Proteins - translation and modification b0029 271 657 -1.31 -0.119 428 722 -1.44 -0.160 464 575 0.002740 0.003460 C9 2 1 130 -1.15 -0.062 lytB b0029 control of stringent response; involved in penicillin tolerance Regulatory function regulator; Global regulatory functions b0030 1614 1670 -1.03 -0.015 3584 3592 -1.00 -0.001 1642 3588 0.009689 0.021600 N17 4 2 2663 -2.23 -0.348 yaaF b0030 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0031 2690 2752 -1.02 -0.010 2138 2401 -1.12 -0.050 2721 2269 0.016056 0.013661 M7 4 2 1855 1.18 0.070 dapB b0031 dihydrodipicolinate reductase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b0032 1681 1257 1.34 0.126 2254 2285 -1.01 -0.006 1469 2270 0.008668 0.013666 K16 1 2 1982 -1.58 -0.198 carA b0032 "carbamoyl-phosphate synthetase, glutamine (small) subunit" Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b0033 1714 1499 1.14 0.058 1996 1824 1.09 0.039 1607 1910 0.009481 0.011500 M16 1 2 1983 -1.21 -0.084 carB b0033 carbamoyl-phosphate synthase large subunit Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b0034 375 678 -1.36 -0.132 296 359 -1.00 0.000 527 328 0.003108 0.001974 N1 4 1 1063 1.04 0.015 caiF b0034 transcriptional regulator of cai operon Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b0035 19772 17619 1.12 0.050 15167 17921 -1.18 -0.072 18696 16544 0.110318 0.099605 H4 2 3 1064 1.11 0.044 caiE b0035 possible synthesis of cofactor for carnitine racemase and dehydratase Putative enzymes "putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0036 11160 11535 -1.03 -0.014 7161 7313 -1.02 -0.009 11348 7237 0.066958 0.043569 B3 4 1 1065 1.54 0.187 caiD b0036 carnitine racemase Central intermediary metabolism enzyme; Degradation of small molecules: Amines b0037 1223 1160 1.05 0.023 592 599 -1.01 -0.005 1192 595 0.007032 0.003583 D3 4 1 1066 1.96 0.293 caiC b0037 probable crotonobetaine/carnitine-CoA ligase Putative enzymes "putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0038 4947 5756 -1.16 -0.066 3415 3613 -1.06 -0.024 5351 3514 0.031575 0.021156 F3 4 1 1067 1.49 0.174 caiB b0038 l-carnitine dehydratase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0039 1423 1588 -1.12 -0.048 1121 1202 -1.07 -0.031 1506 1162 0.008884 0.006993 H3 4 1 1068 1.27 0.104 caiA b0039 probable carnitine operon oxidoreductase Putative enzymes "putative regulator; Central intermediary metabolism: Pool, multipurpose conversions" b0040 4123 4193 -1.02 -0.007 2154 2173 -1.01 -0.004 4158 2163 0.024536 0.013025 J3 4 1 1069 1.88 0.275 caiT b0040 probable carnitine transporter Putative transport proteins "putative transport; Central intermediary metabolism: Pool, multipurpose conversions" b0041 4403 4944 -1.12 -0.050 2733 3480 -1.27 -0.105 4673 3106 0.027577 0.018703 B4 2 1 1257 1.47 0.169 fixA b0041 "probable flavoprotein subunit, carnitine metabolism" Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b0042 371 733 -1.47 -0.166 152 660 -1.32 -0.120 552 406 0.003256 0.002443 D4 2 1 1258 1.09 0.036 fixB b0042 "probable flavoprotein subunit, carnitine metabolism" Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b0043 1182 1038 1.14 0.056 420 525 -1.05 -0.021 1110 472 0.006550 0.002844 P17 4 2 2664 2.18 0.339 fixC b0043 flavoprotein; electron transport Putative enzymes "putative carrier; Energy metabolism, carbon: Electron transport" b0044 211 465 -1.00 0.000 639 751 -1.18 -0.070 338 695 0.001993 0.004186 F4 2 1 1259 -1.40 -0.145 fixX b0044 putative ferredoxin Putative enzymes putative carrier; Not classified b0045 33037 30532 1.08 0.034 13348 11807 1.13 0.053 31785 12578 0.187551 0.075725 G16 3 1 636 2.48 0.394 yaaU b0045 putative transport protein Putative transport proteins putative transport; Not classified b0046 7744 7399 1.05 0.020 3189 3516 -1.10 -0.043 7572 3353 0.044679 0.020184 H19 1 2 2380 2.21 0.345 yabF b0046 putative NAD(P)H oxidoreductase Putative enzymes putative enzyme; Not classified b0047 3167 2473 1.28 0.107 1446 1178 1.23 0.089 2820 1312 0.016641 0.007896 I16 3 1 637 2.11 0.324 kefC b0047 "K+ efflux antiporter, glutathione-regulated" Transport and binding proteins transport; Transport of small molecules: Cations b0048 2632 2534 1.04 0.016 1716 1982 -1.15 -0.062 2583 1849 0.015240 0.011132 I18 4 2 2277 1.37 0.136 folA b0048 dihydrofolate reductase type I; trimethoprim resistance "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b0049 3211 2843 1.13 0.053 2760 3381 -1.22 -0.088 3027 3070 0.017863 0.018486 O16 1 2 1984 -1.03 -0.015 apaH b0049 diadenosine tetraphosphatase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b0050 1061 1022 1.04 0.016 873 905 -1.04 -0.016 1042 889 0.006146 0.005354 B19 4 2 2665 1.15 0.060 apaG b0050 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0051 1220 1420 -1.16 -0.066 1391 1611 -1.16 -0.064 1320 1501 0.007791 0.009038 L3 4 1 1070 -1.16 -0.064 ksgA b0051 "S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase" Cell processes enzyme; Drug/analog sensitivity b0052 4134 4008 1.03 0.013 2358 2563 -1.09 -0.036 4071 2460 0.024021 0.014813 K18 4 2 2278 1.62 0.210 pdxA b0052 pyridoxine biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" b0053 2610 3177 -1.22 -0.085 2721 2898 -1.07 -0.027 2893 2810 0.017073 0.016916 L9 4 2 2630 1.01 0.004 surA b0053 survival protein Cell processes phenotype; Not classified b0054 1522 1450 1.05 0.021 1122 1020 1.10 0.042 1486 1071 0.008768 0.006449 N3 4 1 1071 1.36 0.133 imp b0054 organic solvent tolerance Cell processes "phenotype; Adaptations, atypical conditions" b0055 606 804 -1.32 -0.122 576 454 1.15 0.062 705 515 0.004160 0.003103 D19 4 2 2666 1.34 0.127 yabH b0055 putative DNA binding protein "Hypothetical, unclassified, unknown" phenotype; Not classified b0056 5414 5889 -1.09 -0.037 2685 2979 -1.11 -0.045 5651 2832 0.033347 0.017050 F19 4 2 2667 1.96 0.291 yabP b0056 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0057 5703 4767 1.20 0.078 2652 2973 -1.12 -0.050 5235 2813 0.030892 0.016933 H19 4 2 2668 1.82 0.261 yabQ b0057 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0058 4684 4943 -1.06 -0.023 2625 2581 1.02 0.007 4813 2603 0.028403 0.015671 J19 4 2 2669 1.81 0.258 yabO b0058 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0059 1025 844 1.21 0.084 1619 1440 1.12 0.051 934 1530 0.005513 0.009210 K19 1 2 1614 -1.67 -0.223 hepA b0059 probable ATP-dependent RNA helicase Putative enzymes "putative enzyme; RNA synthesis, modification, DNA transcription" b0060 5738 5404 1.06 0.026 3953 4089 -1.03 -0.015 5571 4021 0.032872 0.024209 F16 4 1 1499 1.36 0.133 polB b0060 DNA polymerase II "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0061 12111 11803 1.03 0.011 9141 8929 1.02 0.010 11957 9035 0.070556 0.054397 B2 2 3 1 1.30 0.113 araD b0061 L-ribulose-5-phosphate 4-epimerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0062 643 627 1.03 0.011 999 1067 -1.07 -0.028 635 1033 0.003748 0.006219 C1 1 1 2 -1.66 -0.220 araA b0062 L-arabinose isomerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0063 2757 2935 -1.06 -0.027 1741 1895 -1.09 -0.037 2846 1818 0.016793 0.010945 E1 1 1 3 1.53 0.186 araB b0063 L-ribulokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0064 737 755 -1.02 -0.011 432 396 1.00 0.000 746 414 0.004403 0.002493 G1 1 1 4 1.47 0.167 araC b0064 transcriptional regulator for ara operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b0065 1205 1296 -1.08 -0.032 625 628 -1.00 -0.002 1250 627 0.007378 0.003772 L19 4 2 2670 1.96 0.291 yabI b0065 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0066 256 364 -1.00 0.000 288 298 -1.00 0.000 310 293 0.001830 0.001764 B13 2 1 913 1.00 0.000 yabJ b0066 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0067 10388 10236 1.01 0.006 8527 10006 -1.17 -0.069 10312 9267 0.060851 0.055791 D13 2 1 914 1.09 0.038 yabK b0067 putative transport system permease protein Putative transport proteins putative transport; Not classified b0068 2733 2403 1.14 0.056 2105 2251 -1.07 -0.029 2568 2178 0.015156 0.013113 M18 4 2 2279 1.16 0.063 tbpA b0068 thiamin-binding periplasmic protein Putative transport proteins putative transport; Transport of small molecules: Other b0069 899 955 -1.06 -0.026 989 1116 -1.13 -0.053 927 1053 0.005469 0.006337 N19 4 2 2671 -1.16 -0.064 yabN b0069 putative transport protein Putative transport proteins putative transport; Not classified b0070 2994 3206 -1.07 -0.030 6566 7044 -1.07 -0.031 3100 6805 0.018294 0.040968 F13 2 1 915 -2.24 -0.350 yabM b0070 putative transport protein Putative transport proteins putative transport; Not classified b0071 4664 4427 1.05 0.023 384 587 -1.17 -0.070 4546 485 0.026822 0.002923 O7 4 2 1856 8.94 0.951 leuD b0071 isopropylmalate isomerase subunit Amino acid biosynthesis enzyme; Amino acid biosynthesis: Leucine b0072 6423 5076 1.27 0.102 1446 1617 -1.12 -0.048 5750 1531 0.033927 0.009220 A9 4 2 1857 3.68 0.566 leuC b0072 3-isopropylmalate isomerase (dehydratase) subunit Amino acid biosynthesis enzyme; Amino acid biosynthesis: Leucine b0073 3881 3613 1.07 0.031 548 741 -1.35 -0.131 3747 644 0.022110 0.003880 C9 4 2 1858 5.70 0.756 leuB b0073 3-isopropylmalate dehydrogenase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Leucine b0074 6692 6704 -1.00 -0.001 965 1074 -1.11 -0.046 6698 1020 0.039524 0.006139 E9 4 2 1859 6.44 0.809 leuA b0074 2-isopropylmalate synthase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Leucine b0075 8913 7069 1.26 0.101 3353 3285 1.02 0.009 7991 3319 0.047151 0.019980 G9 4 2 1860 2.36 0.373 leuL b0075 leu operon leader peptide Amino acid biosynthesis leader; Amino acid biosynthesis: Leucine b0076 2320 2954 -1.27 -0.105 1631 1703 -1.04 -0.019 2637 1667 0.015561 0.010038 I9 4 2 1861 1.55 0.190 leuO b0076 probable transcriptional activator for leuABCD operon Putative regulatory proteins putative regulator; Amino acid biosynthesis: Leucine b0077 7143 6839 1.04 0.019 3506 3492 1.00 0.002 6991 3499 0.041253 0.021066 K9 4 2 1862 1.96 0.292 ilvI b0077 "acetolactate synthase III, valine sensitive, large subunit" Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b0078 3569 3673 -1.03 -0.012 2775 3169 -1.14 -0.058 3621 2972 0.021366 0.017893 M9 4 2 1863 1.19 0.077 ilvH b0078 "acetolactate synthase III, valine sensitive, small subunit" Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b0079 62 66 -1.00 0.000 197 -78 1.00 0.000 64 59 0.000376 0.000358 H4 2 1 1260 1.00 0.000 fruL b0079 fruR leader peptide Energy metabolism "leader; Energy metabolism, carbon: Glycolysis" b0080 675 1093 -1.62 -0.209 482 879 -1.76 -0.245 884 680 0.005215 0.004096 J4 2 1 1261 1.27 0.105 fruR b0080 transcriptional repressor of fru operon and others Regulatory function "regulator; Energy metabolism, carbon: Glycolysis" b0081 1677 1460 1.15 0.060 869 1084 -1.25 -0.096 1569 977 0.009257 0.005881 P19 4 2 2672 1.57 0.197 yabB b0081 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0082 2502 2172 1.15 0.061 1449 1602 -1.11 -0.044 2337 1525 0.013790 0.009183 K4 3 1 590 1.50 0.177 yabC b0082 putative apolipoprotein "Hypothetical, unclassified, unknown" orf; Not classified b0083 1247 1318 -1.06 -0.024 673 694 -1.03 -0.014 1283 683 0.007570 0.004114 P3 4 1 1072 1.84 0.265 ftsL b0083 cell division protein; ingrowth of wall at septum Cell processes phenotype; Cell division b0084 28069 20806 1.35 0.130 20319 20385 -1.00 -0.001 24438 20352 0.144200 0.122530 B5 4 1 1073 1.18 0.071 ftsI b0084 septum formation; penicillin-binding protein 3; peptidoglycan synthetase Cell processes enzyme; Cell division b0085 29605 27906 1.06 0.026 24496 24120 1.02 0.007 28756 24308 0.169678 0.146347 E4 1 1 395 1.16 0.064 murE b0085 meso-diaminopimelate-adding enzyme Cell structure "enzyme; Murein sacculus, peptidoglycan" b0086 3575 3606 -1.01 -0.004 3072 3153 -1.03 -0.011 3591 3112 0.021189 0.018736 G4 1 1 396 1.13 0.053 murF b0086 D-alanine:D-alanine-adding enzyme Cell structure "enzyme; Murein sacculus, peptidoglycan" b0087 5545 5697 -1.03 -0.012 6197 6009 1.03 0.013 5621 6103 0.033166 0.036741 I4 1 1 397 -1.11 -0.044 mraY b0087 phospho-N-acetylmuramoyl-pentapeptide transferase? Cell structure "enzyme; Murein sacculus, peptidoglycan" b0088 6373 7048 -1.11 -0.044 3671 3621 1.01 0.006 6711 3646 0.039598 0.021951 K4 1 1 398 1.80 0.256 murD b0088 UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell structure "enzyme; Murein sacculus, peptidoglycan" b0089 2295 2139 1.07 0.031 506 1480 -2.93 -0.466 2217 993 0.013083 0.005976 D5 4 1 1074 2.19 0.340 ftsW b0089 cell division; membrane protein involved in shape determination Cell processes membrane; Cell division b0090 42802 33168 1.29 0.111 24030 24601 -1.02 -0.010 37985 24315 0.224138 0.146393 M4 1 1 399 1.53 0.185 murG b0090 UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Cell structure "enzyme; Murein sacculus, peptidoglycan" b0091 8233 7283 1.13 0.053 7393 7521 -1.02 -0.007 7758 7457 0.045777 0.044895 O4 1 1 400 1.02 0.008 murC b0091 "L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase" Cell structure "enzyme; Murein sacculus, peptidoglycan" b0092 9272 9240 1.00 0.001 8374 7434 1.13 0.052 9256 7904 0.054615 0.047586 A6 1 1 401 1.15 0.060 ddlB b0092 "D-alanine-D-alanine ligase B, affects cell division" Cell structure "enzyme; Murein sacculus, peptidoglycan" b0093 12747 10476 1.22 0.085 6013 6173 -1.03 -0.011 11612 6093 0.068516 0.036683 F5 4 1 1075 1.87 0.271 ftsQ b0093 cell division protein; ingrowth of wall at septum Cell processes phenotype; Cell division b0094 3597 3363 1.07 0.029 1517 1757 -1.16 -0.064 3480 1637 0.020534 0.009854 H5 4 1 1076 2.08 0.319 ftsA b0094 "ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes" Cell processes phenotype; Cell division b0095 3372 2466 1.37 0.136 1426 1328 1.07 0.031 2919 1377 0.017223 0.008290 J5 4 1 1077 2.08 0.318 ftsZ b0095 cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase Cell processes enzyme; Cell division b0096 3870 3304 1.17 0.069 4007 4361 -1.09 -0.037 3587 4184 0.021165 0.025189 C6 1 1 402 -1.19 -0.076 lpxC b0096 UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis Cell structure enzyme; Surface polysaccharides & antigens b0097 5145 5006 1.03 0.012 5736 5935 -1.03 -0.015 5075 5836 0.029947 0.035134 B21 4 2 2673 -1.17 -0.069 yacA b0097 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0098 212 116 1.00 0.000 190 60 1.00 0.000 164 125 0.000970 0.000754 K16 3 1 638 1.00 0.000 secA b0098 preprotein translocase; secretion protein Transport and binding proteins "transport; Protein, peptide secretion" b0099 449 266 1.00 0.000 392 443 -1.00 0.000 358 417 0.002110 0.002513 A18 1 2 1985 -1.00 0.000 mutT b0099 "7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions" Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b0100 10468 10870 -1.04 -0.016 7277 7826 -1.08 -0.032 10669 7551 0.062956 0.045462 D21 4 2 2674 1.38 0.141 b0100 b0100 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0101 35569 34045 1.04 0.019 26934 28140 -1.04 -0.019 34807 27537 0.205385 0.165787 F21 4 2 2675 1.24 0.093 yacG b0101 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0102 7076 7382 -1.04 -0.018 5246 5597 -1.07 -0.028 7229 5422 0.042654 0.032641 H21 4 2 2676 1.31 0.116 yacF b0102 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0103 659 864 -1.31 -0.117 315 381 -1.00 0.000 761 348 0.004493 0.002095 H16 4 1 1500 1.50 0.175 yacE b0103 putative DNA repair protein "Hypothetical, unclassified, unknown" orf; Not classified b0104 3602 3236 1.11 0.046 3259 3734 -1.15 -0.059 3419 3496 0.020175 0.021051 C18 1 2 1986 -1.04 -0.018 guaC b0104 GMP reductase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b0105 1926 1689 1.14 0.057 1324 1336 -1.01 -0.004 1807 1330 0.010665 0.008007 J21 4 2 2677 1.33 0.124 b0105 b0105 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0106 9225 9925 -1.08 -0.032 5683 6008 -1.06 -0.024 9575 5846 0.056500 0.035194 E6 1 1 403 1.61 0.206 hofC b0106 "putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" Putative transport proteins putative transport; Not classified b0107 12732 12984 -1.02 -0.009 8385 8589 -1.02 -0.010 12858 8487 0.075870 0.051098 G6 1 1 404 1.48 0.172 hofB b0107 "putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" Putative transport proteins putative transport; Not classified b0108 1389 755 1.84 0.265 1047 1123 -1.07 -0.030 1072 1085 0.006327 0.006533 N9 4 2 2631 -1.03 -0.014 ppdD b0108 prelipin peptidase dependent protein Putative enzymes putative enzyme; Not classified b0109 655 762 -1.16 -0.065 1051 780 1.35 0.130 708 915 0.004180 0.005512 O18 4 2 2280 -1.32 -0.120 nadC b0109 quinolinate phosphoribosyltransferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" b0110 4820 4693 1.03 0.012 2811 2689 1.05 0.019 4756 2750 0.028064 0.016557 L5 4 1 1078 1.70 0.229 ampD b0110 regulates ampC Regulatory function regulator; Not classified b0111 2064 1710 1.21 0.082 800 1225 -1.53 -0.185 1887 1013 0.011135 0.006097 N5 4 1 1079 1.83 0.262 ampE b0111 regulates ampC Regulatory function regulator; Drug/analog sensitivity b0112 3285 2603 1.26 0.101 499 1023 -2.05 -0.311 2944 761 0.017374 0.004582 M16 3 1 639 3.79 0.579 aroP b0112 aromatic amino acid transport protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0113 730 979 -1.34 -0.127 1293 1449 -1.12 -0.049 855 1371 0.005043 0.008254 L4 2 1 1262 -1.64 -0.214 pdhR b0113 transcriptional regulator for pyruvate dehydrogenase complex Regulatory function "regulator; Energy metabolism, carbon: Pyruvate dehydrogenase" b0114 6799 7576 -1.11 -0.047 14686 14595 1.01 0.003 7187 14641 0.042409 0.088146 N4 2 1 1263 -2.08 -0.318 aceE b0114 pyruvate dehydrogenase (decarboxylase component) Central intermediary metabolism "enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" b0115 4199 4389 -1.05 -0.019 6372 6392 -1.00 -0.001 4294 6382 0.025338 0.038425 P4 2 1 1264 -1.52 -0.181 aceF b0115 pyruvate dehydrogenase (dihydrolipoyltransacetylase component) Central intermediary metabolism "enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" b0116 14948 17740 -1.19 -0.074 30956 33310 -1.08 -0.032 16344 32133 0.096440 0.193460 B6 2 1 1265 -2.01 -0.302 lpdA b0116 lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex Central intermediary metabolism "enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" b0117 6516 6447 1.01 0.005 1672 1898 -1.14 -0.055 6481 1785 0.038245 0.010745 L21 4 2 2678 3.56 0.551 yacH b0117 putative membrane protein putative membrane protein putative membrane; Not classified b0118 3260 3448 -1.06 -0.024 3044 3562 -1.17 -0.068 3354 3303 0.019790 0.019887 D6 2 1 1266 -1.00 -0.002 acnB b0118 aconitate hydrase B Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0119 1454 1836 -1.26 -0.101 1402 1557 -1.11 -0.046 1645 1479 0.009705 0.008906 N21 4 2 2679 1.09 0.037 yacL b0119 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0120 53644 45181 1.19 0.075 25026 23946 1.05 0.019 49413 24486 0.291570 0.147419 O18 2 2 2088 1.98 0.296 speD b0120 S-adenosylmethionine decarboxylase Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b0121 618 1100 -1.78 -0.250 2593 3131 -1.21 -0.082 859 2862 0.005070 0.017232 A20 2 2 2089 -3.40 -0.531 speE b0121 spermidine synthase = putrescine aminopropyltransferase Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b0122 188 239 -1.00 0.000 276 380 -1.00 0.000 213 328 0.001259 0.001975 H13 2 1 916 -1.00 0.000 yacC b0122 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0123 610 423 1.22 0.086 875 963 -1.10 -0.042 516 919 0.003047 0.005533 P21 4 2 2680 -1.82 -0.259 yacK b0123 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0124 5331 5494 -1.03 -0.013 4234 4581 -1.08 -0.034 5413 4407 0.031940 0.026535 I1 1 1 5 1.20 0.081 gcd b0124 glucose dehydrogenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0125 2444 2361 1.04 0.015 2305 2703 -1.17 -0.069 2402 2504 0.014174 0.015076 E18 1 2 1987 -1.06 -0.027 hpt b0125 hypoxanthine phosphoribosyltransferase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b0126 17290 13616 1.27 0.104 8608 8808 -1.02 -0.010 15453 8708 0.091184 0.052425 J19 1 2 2381 1.74 0.240 yadF b0126 putative carbonic anhdrase (EC 4.2.1.1) Putative enzymes putative enzyme; Not classified b0127 2363 2881 -1.22 -0.086 515 797 -1.55 -0.190 2622 656 0.015472 0.003950 J13 2 1 917 3.92 0.593 yadG b0127 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0128 2279 1740 1.31 0.117 3112 2987 1.04 0.018 2009 3050 0.011856 0.018360 B23 4 2 2681 -1.55 -0.190 yadH b0128 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0129 2050 2032 1.01 0.004 1649 1478 1.12 0.048 2041 1563 0.012042 0.009412 L19 1 2 2382 1.28 0.107 yadI b0129 putative PTS enzyme II B component Putative transport proteins putative transport; Not classified b0130 2419 2576 -1.06 -0.027 2273 2354 -1.04 -0.015 2498 2314 0.014738 0.013929 D23 4 2 2682 1.06 0.025 yadE b0130 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0131 718 899 -1.25 -0.097 1530 1385 1.10 0.043 808 1458 0.004771 0.008775 A20 4 2 2281 -1.84 -0.265 panD b0131 aspartate 1-decarboxylase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pantothenate" b0132 990 1074 -1.09 -0.035 1035 808 1.28 0.107 1032 922 0.006091 0.005548 F23 4 2 2683 1.10 0.041 yadD b0132 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0133 1373 1536 -1.12 -0.049 1409 1598 -1.13 -0.055 1455 1503 0.008583 0.009052 C20 4 2 2282 -1.05 -0.023 panC b0133 pantothenate synthetase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pantothenate" b0134 8450 8210 1.03 0.013 8223 8978 -1.09 -0.038 8330 8600 0.049153 0.051778 E20 4 2 2283 -1.05 -0.023 panB b0134 3-methyl-2-oxobutanoate hydroxymethyltransferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pantothenate" b0135 9 69 -1.00 0.000 -66 67 -1.00 0.000 39 1 0.000231 0.000004 P5 4 1 1080 1.00 0.000 yadC b0135 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0136 2296 2561 -1.12 -0.047 931 1209 -1.30 -0.114 2429 1070 0.014331 0.006442 B7 4 1 1081 2.22 0.347 yadK b0136 putative fimbrial protein "Hypothetical, unclassified, unknown" orf; Not classified b0137 1004 1216 -1.21 -0.083 704 648 1.09 0.036 1110 676 0.006551 0.004069 D7 4 1 1082 1.61 0.207 yadL b0137 putative fimbrial protein "Hypothetical, unclassified, unknown" orf; Not classified b0138 645 845 -1.31 -0.117 346 404 -1.00 0.000 745 375 0.004394 0.002257 F7 4 1 1083 1.46 0.166 yadM b0138 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0139 504 613 -1.22 -0.086 325 310 1.00 0.000 558 317 0.003295 0.001911 I6 1 1 405 1.10 0.041 htrE b0139 probable outer membrane porin protein involved in fimbrial assembly putative membrane protein putative membrane; Surface structures b0140 4257 3470 1.23 0.089 2210 2132 1.04 0.016 3863 2171 0.022796 0.013071 K6 1 1 406 1.74 0.242 ecpD b0140 probable pilin chaperone similar to PapD Putative factors putative factor; Surface structures b0141 1956 2206 -1.13 -0.052 1159 1035 1.12 0.049 2081 1097 0.012279 0.006604 H7 4 1 1084 1.86 0.269 yadN b0141 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0142 4267 4772 -1.12 -0.049 2491 3182 -1.28 -0.106 4519 2836 0.026666 0.017076 G20 4 2 2284 1.56 0.194 folK b0142 "7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b0143 2318 2590 -1.12 -0.048 2938 2525 1.16 0.066 2454 2732 0.014480 0.016446 M19 1 2 1615 -1.14 -0.055 pcnB b0143 poly(A) polymerase I "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b0144 93 350 -1.00 0.000 208 488 -1.00 0.000 221 348 0.001306 0.002093 M9 2 2 1671 -1.00 0.000 yadB b0144 putative tRNA synthetase Putative enzymes "putative enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0145 7717 8217 -1.06 -0.027 5379 5259 1.02 0.010 7967 5319 0.047011 0.032023 J16 4 1 1501 1.47 0.167 dksA b0145 dnaK suppressor protein "DNA replication, repair, restriction/modification" "phenotype; DNA - replication, repair, restriction/modification" b0146 829 739 1.12 0.050 537 603 -1.12 -0.050 784 570 0.004625 0.003433 K1 1 1 6 1.35 0.129 sfsA b0146 probable regulator for maltose metabolism Putative regulatory proteins putative regulator; Degradation of small molecules: Carbon compounds b0147 1212 1513 -1.25 -0.096 1130 1180 -1.04 -0.019 1362 1155 0.008037 0.006952 H23 4 2 2684 1.16 0.063 yadP b0147 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0148 2697 2650 1.02 0.008 4195 4071 1.03 0.013 2674 4133 0.015776 0.024884 O19 1 2 1616 -1.58 -0.198 hrpB b0148 "helicase, ATP-dependent" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0149 2594 2162 1.20 0.079 1416 1526 -1.08 -0.032 2378 1471 0.014033 0.008858 M6 1 1 407 1.58 0.200 mrcB b0149 peptidoglycan synthetase; penicillin-binding protein 1B Cell structure "enzyme; Murein sacculus, peptidoglycan" b0150 3376 3366 1.00 0.001 3417 3160 1.08 0.034 3371 3288 0.019890 0.019798 O6 1 1 408 1.00 0.002 fhuA b0150 "outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80" Cell structure membrane; Outer membrane constituents b0151 692 594 1.16 0.066 407 431 -1.00 0.000 643 419 0.003794 0.002523 O16 3 1 640 1.26 0.102 fhuC b0151 ATP-binding component of hydroxymate-dependent iron transport Transport and binding proteins transport; Transport of small molecules: Cations b0152 1753 1520 1.15 0.062 1651 1706 -1.03 -0.014 1637 1678 0.009659 0.010105 A18 3 1 641 -1.05 -0.020 fhuD b0152 "hydroxamate-dependent iron uptake, cytoplasmic membrane component" Transport and binding proteins transport; Transport of small molecules: Cations b0153 1018 788 1.29 0.111 315 480 -1.00 0.000 903 397 0.005327 0.002393 C18 3 1 642 1.78 0.249 fhuB b0153 "hydroxamate-dependent iron uptake, cytoplasmic membrane component" Transport and binding proteins transport; Transport of small molecules: Cations b0154 2893 3044 -1.05 -0.022 2006 1977 1.01 0.006 2969 1992 0.017517 0.011991 I20 4 2 2285 1.46 0.165 hemL b0154 glutamate-1-semialdehyde aminotransferase (aminomutase) "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b0155 2963 2937 1.01 0.004 1549 1753 -1.13 -0.054 2950 1651 0.017407 0.009939 L13 2 1 918 1.75 0.243 yadQ b0155 putative channel transporter Putative transport proteins putative transport; Not classified b0156 2101 2331 -1.11 -0.045 1520 1996 -1.31 -0.118 2216 1758 0.013077 0.010584 J23 4 2 2685 1.24 0.092 yadR b0156 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0157 3925 4589 -1.17 -0.068 3189 3973 -1.25 -0.095 4257 3581 0.025119 0.021558 L23 4 2 2686 1.17 0.066 yadS b0157 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0158 313 529 -1.06 -0.025 473 502 -1.00 -0.001 421 487 0.002483 0.002933 N23 4 2 2687 -1.00 0.000 yadT b0158 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0159 636 472 1.27 0.105 1605 1950 -1.22 -0.085 554 1778 0.003270 0.010702 P23 4 2 2688 -3.27 -0.515 pfs b0159 "orf, hypothetical protein" Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b0160 486 553 -1.11 -0.044 519 464 1.04 0.016 520 492 0.003067 0.002961 C20 2 2 2090 1.02 0.010 dgt b0160 deoxyguanosine triphosphate triphosphohydrolase Central intermediary metabolism enzyme; Central intermediary metabolism: Nucleotide hydrolysis b0161 13614 14851 -1.09 -0.038 8920 9030 -1.01 -0.005 14232 8975 0.083981 0.054036 O9 2 2 1672 1.55 0.192 htrA b0161 periplasmic serine protease Do; heat shock protein HtrA Cell processes "enzyme; Degradation of proteins, peptides, glyco" b0162 104 118 -1.00 0.000 -36 277 -1.00 0.000 111 120 0.000654 0.000725 O19 2 1 176 -1.00 0.000 yaeG b0162 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0163 1331 865 1.54 0.187 281 211 1.00 0.000 1098 246 0.006477 0.001484 M4 3 1 591 2.16 0.334 yaeH b0163 putative structural protein Putative cell structure putative structure; Not classified b0164 4004 4202 -1.05 -0.021 3508 3000 1.17 0.068 4103 3254 0.024209 0.019593 B2 1 2 2689 1.24 0.092 yaeI b0164 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0165 456 286 1.00 0.000 56 14 1.00 0.000 371 35 0.002188 0.000210 D2 1 2 2690 1.00 0.000 b0165 b0165 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0166 2900 3430 -1.18 -0.073 2186 2285 -1.04 -0.019 3165 2236 0.018675 0.013459 O9 4 2 1864 1.39 0.142 dapD b0166 "2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b0167 2158 2400 -1.11 -0.046 1139 1718 -1.51 -0.178 2279 1429 0.013447 0.008602 A11 4 2 1865 1.56 0.194 glnD b0167 protein PII; uridylyltransferase acts on regulator of glnA Regulatory function enzyme; Amino acid biosynthesis: Glutamine b0168 965 1044 -1.08 -0.034 1345 2156 -1.60 -0.205 1004 1751 0.005926 0.010539 A11 2 2 1673 -1.78 -0.250 map b0168 methionine aminopeptidase "Translation, post-translational modification" enzyme; Proteins - translation and modification b0169 5061 5738 -1.13 -0.055 17444 19258 -1.10 -0.043 5399 18351 0.031859 0.110481 C11 2 2 1674 -3.47 -0.540 rpsB b0169 30S ribosomal subunit protein S2 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b0170 3366 3179 1.06 0.025 29747 32984 -1.11 -0.045 3272 31365 0.019309 0.188838 E11 2 2 1675 -9.78 -0.990 tsf b0170 protein chain elongation factor EF-Ts "Translation, post-translational modification" factor; Proteins - translation and modification b0171 4056 3627 1.12 0.049 5859 7151 -1.22 -0.087 3842 6505 0.022668 0.039162 E20 2 2 2091 -1.73 -0.237 pyrH b0171 uridylate kinase Nucleotide biosynthesis and metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b0172 2487 1825 1.36 0.135 2414 2961 -1.23 -0.089 2156 2688 0.012721 0.016180 G11 2 2 1676 -1.27 -0.104 frr b0172 ribosome releasing factor "Translation, post-translational modification" factor; Proteins - translation and modification b0173 356 582 -1.16 -0.066 325 497 -1.00 0.000 469 411 0.002767 0.002477 N13 2 1 919 1.00 0.000 yaeM b0173 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0174 5373 3986 1.35 0.130 7664 7523 1.02 0.008 4679 7593 0.027612 0.045717 F2 1 2 2691 -1.66 -0.219 yaeS b0174 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0175 527 626 -1.19 -0.075 1204 1322 -1.10 -0.041 577 1263 0.003403 0.007605 O6 2 2 2040 -2.23 -0.349 cdsA b0175 CDP-diglyceride synthetase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b0176 2154 1773 1.21 0.084 2093 2257 -1.08 -0.033 1964 2175 0.011587 0.013095 H2 1 2 2692 -1.13 -0.053 yaeL b0176 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0177 4346 3404 1.28 0.106 5322 5061 1.05 0.022 3875 5191 0.022866 0.031255 J2 1 2 2693 -1.37 -0.136 yaeT b0177 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0178 7315 7007 1.04 0.019 6595 7326 -1.11 -0.046 7161 6961 0.042255 0.041906 A8 1 1 409 1.01 0.004 hlpA b0178 "histone-like protein, located in outer membrane or nucleoid" "DNA replication, repair, restriction/modification" "factor; Basic proteins - synthesis, modification" b0179 38245 35415 1.08 0.033 26483 24921 1.06 0.026 36830 25702 0.217321 0.154742 C8 1 1 410 1.40 0.147 lpxD b0179 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase; third step of endotoxin (lipidA) synthesis Cell structure enzyme; Surface polysaccharides & antigens b0180 317 853 -1.71 -0.232 2138 2510 -1.17 -0.070 585 2324 0.003454 0.013994 A8 2 2 2041 -4.05 -0.608 fabZ b0180 (3R)-hydroxymyristol acyl carrier protein dehydratase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b0181 2689 2568 1.05 0.020 4104 4052 1.01 0.005 2629 4078 0.015512 0.024553 E8 1 1 411 -1.58 -0.199 lpxA b0181 UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis Cell structure enzyme; Surface polysaccharides & antigens b0182 4189 4484 -1.07 -0.030 5489 5900 -1.07 -0.031 4337 5694 0.025590 0.034282 G8 1 1 412 -1.34 -0.127 lpxB b0182 "tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step" Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b0183 559 486 1.12 0.049 786 1083 -1.38 -0.139 523 935 0.003083 0.005627 L16 4 1 1502 -1.82 -0.261 rnhB b0183 "RNAse HII, degrades RNA of DNA-RNA hybrids" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b0184 132 287 -1.00 0.000 414 437 -1.00 0.000 210 425 0.001237 0.002561 N16 4 1 1503 -1.00 0.000 dnaE b0184 "DNA polymerase III, alpha subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0185 1182 1361 -1.15 -0.061 2317 2594 -1.12 -0.049 1271 2456 0.007502 0.014784 C8 2 2 2042 -1.97 -0.295 accA b0185 "acetylCoA carboxylase, carboxytransferase component, alpha subunit" Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b0186 -47 156 -1.00 0.000 -26 38 -1.00 0.000 54 6 0.000320 0.000037 F6 2 1 1267 1.00 0.000 ldcC b0186 "lysine decarboxylase 2, constitutive" Central intermediary metabolism "enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" b0187 989 839 1.18 0.071 572 740 -1.29 -0.112 914 656 0.005395 0.003949 L2 1 2 2694 1.37 0.135 yaeR b0187 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0188 1299 1086 1.20 0.078 735 739 -1.01 -0.003 1192 737 0.007035 0.004436 J7 4 1 1085 1.59 0.200 mesJ b0188 cell cycle protein Cell processes orf; Cell division b0189 6184 6792 -1.10 -0.041 4961 5155 -1.04 -0.017 6488 5058 0.038284 0.030454 N2 1 2 2695 1.26 0.099 yaeO b0189 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0190 8847 8492 1.04 0.018 11164 10724 1.04 0.017 8670 10944 0.051156 0.065890 P2 1 2 2696 -1.29 -0.110 yaeQ b0190 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0191 139 148 -1.00 0.000 63 100 -1.00 0.000 143 81 0.000847 0.000490 B4 1 2 2697 1.00 0.000 yaeJ b0191 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0192 1354 1328 1.02 0.008 453 585 -1.17 -0.068 1341 519 0.007912 0.003125 L7 4 1 1086 2.53 0.403 cutF b0192 copper homeostasis protein (lipoprotein) Putative transport proteins putative transport; Detoxification b0193 284 215 1.00 0.000 269 158 1.00 0.000 249 213 0.001472 0.001283 D4 1 2 2698 1.00 0.000 yaeF b0193 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0194 1616 2187 -1.35 -0.131 2112 2064 1.02 0.010 1901 2088 0.011218 0.012570 I11 2 2 1677 -1.12 -0.049 proS b0194 proline tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0195 483 235 1.00 0.000 210 198 1.00 0.000 359 204 0.002121 0.001230 F4 1 2 2699 1.00 0.000 yaeB b0195 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0196 1935 1763 1.10 0.040 972 1262 -1.30 -0.113 1849 1117 0.010911 0.006725 I8 1 1 413 1.62 0.210 rcsF b0196 regulator in colanic acid synthesis; interacts with RcsB Regulatory function regulator; Surface polysaccharides & antigens b0197 7404 7450 -1.01 -0.003 2578 2444 1.05 0.023 7427 2511 0.043825 0.015119 K8 1 1 414 2.90 0.462 yaeC b0197 putative lipoprotein putative membrane protein putative membrane; Not classified b0198 1450 1414 1.03 0.011 801 381 1.60 0.205 1432 591 0.008451 0.003556 A2 3 1 577 2.38 0.376 yaeE b0198 putative transport system permease protein Putative transport proteins putative transport; Not classified b0199 1357 1295 1.05 0.020 980 576 1.70 0.231 1326 778 0.007823 0.004686 E18 3 1 643 1.67 0.223 abc b0199 ATP-binding component of a transporter Putative transport proteins transport; Not classified b0200 10022 9500 1.05 0.023 4232 4922 -1.16 -0.066 9761 4577 0.057596 0.027556 G20 2 2 2092 2.09 0.320 yaeD b0200 putative phosphatase Putative enzymes putative enzyme; Not classified b0207 664 628 1.06 0.024 546 655 -1.20 -0.079 646 601 0.003812 0.003616 I20 2 2 2093 1.05 0.023 yafB b0207 putative aldose reductase (EC 1.1.1.21) Putative enzymes putative enzyme; Not classified b0208 2611 2621 -1.00 -0.002 2514 2772 -1.10 -0.042 2616 2643 0.015437 0.015915 A21 2 1 177 -1.03 -0.013 yafC b0208 putative transcriptional regulator LYSR-type Putative regulatory proteins putative transport; Not classified b0209 1371 1224 1.12 0.049 1062 847 1.25 0.099 1297 955 0.007655 0.005747 H4 1 2 2700 1.33 0.125 yafD b0209 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0210 1251 916 1.36 0.135 618 525 1.18 0.070 1083 571 0.006393 0.003440 N19 1 2 2383 1.86 0.269 yafE b0210 putative biotin synthesis protein Putative enzymes putative enzyme; Not classified b0211 3572 2979 1.20 0.079 2163 2456 -1.14 -0.055 3275 2310 0.019327 0.013906 H6 2 1 1268 1.39 0.143 dniR b0211 transcriptional regulator for nitrite reductase (cytochrome c552) Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b0212 541 502 1.08 0.033 455 321 1.00 0.000 522 388 0.003077 0.002336 J4 1 2 2701 1.03 0.011 gloB b0212 probable hydroxyacylglutathione hydrolase Putative enzymes "putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0213 308 163 1.00 0.000 339 242 1.00 0.000 235 291 0.001389 0.001750 L4 1 2 2702 -1.00 0.000 yafS b0213 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0214 719 651 1.11 0.043 479 490 -1.00 0.000 685 484 0.004041 0.002917 P16 4 1 1504 1.35 0.129 rnhA b0214 "RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b0215 1168 1348 -1.15 -0.062 463 626 -1.25 -0.098 1258 544 0.007424 0.003278 B18 4 1 1505 2.26 0.355 dnaQ b0215 "DNA polymerase III, epsilon subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0217 -53 209 -1.00 0.000 194 131 1.00 0.000 78 162 0.000463 0.000978 K20 2 2 2094 -1.00 0.000 yafT b0217 putative aminopeptidase Putative enzymes putative enzyme; Not classified b0218 122 258 -1.00 0.000 227 134 1.00 0.000 190 181 0.001120 0.001087 N4 1 2 2703 1.00 0.000 yafU b0218 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0219 4304 3660 1.18 0.070 4243 4373 -1.03 -0.013 3982 4308 0.023496 0.025937 M20 2 2 2095 -1.10 -0.043 yafV b0219 putative EC 3.5. amidase-type enzyme Putative enzymes putative enzyme; Not classified b0220 1682 1666 1.01 0.004 518 377 1.04 0.015 1674 447 0.009878 0.002694 P4 1 2 2704 3.29 0.518 ykfE b0220 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0221 2423 1959 1.24 0.092 2746 2636 1.04 0.018 2191 2691 0.012929 0.016200 O20 2 2 2096 -1.25 -0.098 yafH b0221 putative acyl-CoA dehydrogenase (EC 1.3.99.-) Putative enzymes putative enzyme; Not classified b0222 2581 2308 1.12 0.049 1639 1920 -1.17 -0.069 2444 1780 0.014423 0.010714 M8 1 1 415 1.35 0.129 gmhA b0222 phosphoheptose isomerase Cell structure enzyme; Surface polysaccharides & antigens b0223 10124 10226 -1.01 -0.004 14324 13392 1.07 0.029 10175 13858 0.060041 0.083431 A22 2 2 2097 -1.39 -0.143 yafJ b0223 putative amidotransferase Putative enzymes putative enzyme; Not classified b0224 3053 2419 1.26 0.101 1727 1530 1.13 0.053 2736 1628 0.016146 0.009804 B6 1 2 2705 1.65 0.217 yafK b0224 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0225 30 -43 1.00 0.000 32 -43 1.00 0.000 -6 -6 -0.000037 -0.000034 D6 1 2 2706 -1.00 0.000 yafQ b0225 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0226 1030 884 1.16 0.066 291 378 -1.00 0.000 957 335 0.005647 0.002014 P9 4 2 2632 1.88 0.275 dinJ b0226 damage-inducible protein J Cell processes phenotype; Not classified b0227 316 397 -1.00 0.000 172 177 -1.00 0.000 357 175 0.002104 0.001052 F6 1 2 2707 1.00 0.000 yafL b0227 putative lipoprotein putative membrane protein putative membrane; Not classified b0228 2535 1548 1.64 0.214 2227 2542 -1.14 -0.057 2041 2384 0.012046 0.014354 H6 1 2 2708 -1.19 -0.076 yafM b0228 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0229 606 733 -1.21 -0.083 1032 722 1.43 0.155 670 877 0.003951 0.005278 N7 4 1 1087 -1.34 -0.126 fhiA b0229 flagellar biosynthesis Putative factors putative enzyme; Surface structures b0230 1896 1917 -1.01 -0.005 810 819 -1.01 -0.005 1907 815 0.011251 0.004905 P7 4 1 1088 2.29 0.361 mbhA b0230 putative motility protein Putative cell structure putative structure; Not classified b0231 921 1203 -1.31 -0.116 787 781 1.01 0.003 1062 784 0.006265 0.004721 J6 1 2 2709 1.33 0.123 dinP b0231 damage-inducible protein P; putative tRNA synthetase Putative enzymes putative enzyme; Not classified b0232 224 100 1.00 0.000 157 49 1.00 0.000 162 103 0.000957 0.000619 L6 1 2 2710 1.00 0.000 yafN b0232 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0233 199 294 -1.00 0.000 149 170 -1.00 0.000 247 160 0.001455 0.000962 N6 1 2 2711 1.00 0.000 yafO b0233 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0234 2914 3084 -1.06 -0.025 1673 1620 1.03 0.014 2999 1646 0.017694 0.009912 P6 1 2 2712 1.79 0.252 yafP b0234 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0235 66 1 1.00 0.000 112 -82 1.00 0.000 34 15 0.000198 0.000090 B8 1 2 2713 1.00 0.000 b0235 b0235 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0236 703 447 1.41 0.148 908 884 1.03 0.012 575 896 0.003394 0.005393 K11 2 2 1678 -1.59 -0.201 prfH b0236 probable peptide chain release factor "Translation, post-translational modification" putative factor; Proteins - translation and modification b0237 2992 2954 1.01 0.006 2773 3098 -1.12 -0.048 2973 2936 0.017543 0.017675 M11 2 2 1679 -1.01 -0.003 pepD b0237 aminoacyl-histidine dipeptidase (peptidase D) Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b0238 3400 2821 1.21 0.081 2899 2970 -1.02 -0.011 3110 2935 0.018354 0.017668 G18 1 2 1988 1.04 0.017 gpt b0238 guanine-hypoxanthine phosphoribosyltransferase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b0239 2463 2327 1.06 0.025 1221 1165 1.05 0.021 2395 1193 0.014132 0.007183 D8 1 2 2714 1.97 0.294 yafA b0239 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0240 5620 5143 1.09 0.039 2816 3491 -1.24 -0.093 5381 3154 0.031753 0.018987 O8 1 1 416 1.67 0.223 crl b0240 transcriptional regulator of cryptic csgA gene for curli surface fibers Regulatory function regulator; Surface structures b0241 852 692 1.23 0.090 520 498 1.04 0.017 772 509 0.004554 0.003066 A10 1 1 417 1.49 0.172 phoE b0241 "outer membrane pore protein E (E,Ic,NmpAB)" Cell structure membrane; Outer membrane constituents b0242 6726 5748 1.17 0.068 6434 6421 1.00 0.001 6237 6427 0.036802 0.038697 C11 4 2 1866 -1.05 -0.022 proB b0242 gamma-glutamate kinase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Proline b0243 3338 3420 -1.02 -0.011 2778 2481 1.12 0.049 3379 2629 0.019940 0.015831 E11 4 2 1867 1.26 0.100 proA b0243 gamma-glutamylphosphate reductase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Proline b0245 71 12 1.00 0.000 182 83 1.00 0.000 41 132 0.000244 0.000796 F8 1 2 2715 -1.00 0.000 b0245 b0245 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0246 422 376 1.00 0.000 461 216 1.00 0.000 399 338 0.002355 0.002037 H8 1 2 2716 1.00 0.000 yafW b0246 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0247 527 586 -1.11 -0.046 299 324 -1.00 0.000 556 311 0.003282 0.001873 D18 4 1 1506 1.09 0.039 ykfG b0247 putative DNA repair protein Putative enzymes putative enzyme; Not classified b0248 231 372 -1.00 0.000 262 168 1.00 0.000 301 215 0.001778 0.001293 J8 1 2 2717 1.00 0.000 yafX b0248 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0249 1030 1015 1.01 0.006 697 543 1.28 0.109 1022 620 0.006031 0.003733 L8 1 2 2718 1.62 0.208 ykfF b0249 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0250 1336 1340 -1.00 -0.001 812 820 -1.01 -0.005 1338 816 0.007897 0.004913 N8 1 2 2719 1.61 0.206 ykfB b0250 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0251 1065 802 1.33 0.123 613 470 1.23 0.088 934 542 0.005510 0.003261 P8 1 2 2720 1.69 0.228 yafY b0251 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0252 109 139 -1.00 0.000 273 188 1.00 0.000 124 231 0.000732 0.001389 M5 4 1 311 -1.00 0.000 yafZ b0252 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0253 150 144 1.00 0.000 216 133 1.00 0.000 147 175 0.000868 0.001052 B10 1 2 2721 -1.00 0.000 ykfA b0253 putative GTP-binding protein "Hypothetical, unclassified, unknown" orf; Not classified b0254 213 383 -1.00 0.000 116 300 -1.00 0.000 298 208 0.001756 0.001252 C21 2 1 178 1.00 0.000 perR b0254 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0255 209 193 1.00 0.000 70 170 -1.00 0.000 201 120 0.001185 0.000721 D10 1 2 2722 1.00 0.000 yi91a b0255 "IS911 hypothetical protein, variant (IS911A)" "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0256 1638 1591 1.03 0.012 692 839 -1.21 -0.084 1615 766 0.009528 0.004609 O5 4 1 312 2.07 0.315 tra8_1 b0256 IS30 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0257 1875 1876 -1.00 0.000 3135 3264 -1.04 -0.017 1875 3199 0.011066 0.019262 A7 4 1 313 -1.74 -0.241 b0257 b0257 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b0258 9581 9408 1.02 0.008 6916 6706 1.03 0.013 9495 6811 0.056026 0.041006 F10 1 2 2723 1.37 0.136 ykfC b0258 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0259 6227 5955 1.05 0.019 7155 8492 -1.19 -0.074 6091 7824 0.035941 0.047102 C7 4 1 314 -1.31 -0.117 trs5_1 b0259 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0260 2517 2717 -1.08 -0.033 3015 3145 -1.04 -0.018 2617 3080 0.015441 0.018543 C22 2 2 2098 -1.20 -0.079 ykfD b0260 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b0261 1940 1869 1.04 0.016 2780 2893 -1.04 -0.017 1904 2836 0.011237 0.017076 C10 1 1 418 -1.52 -0.182 yagD b0261 putative enzyme Putative enzymes putative enzyme; Not classified b0262 1258 1606 -1.28 -0.106 1175 1571 -1.34 -0.126 1432 1373 0.008451 0.008264 E22 2 2 2099 1.02 0.010 afuC b0262 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0263 603 521 1.16 0.064 155 184 -1.00 0.000 562 170 0.003317 0.001022 P13 2 1 920 1.11 0.044 b0263 b0263 putative transport system permease protein Putative transport proteins putative transport; Not classified b0264 1035 1193 -1.15 -0.061 1021 1157 -1.13 -0.054 1114 1089 0.006574 0.006557 E7 4 1 315 1.00 0.001 insB_2 b0264 IS1 protein InsB "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0265 18611 21065 -1.13 -0.054 16062 16340 -1.02 -0.007 19838 16201 0.117057 0.097540 G7 4 1 316 1.20 0.079 insA_2 b0265 IS1 protein InsA "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0266 215 457 -1.00 0.000 146 165 -1.00 0.000 336 156 0.001982 0.000938 H10 1 2 2724 1.00 0.000 yagB b0266 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0267 999 943 1.06 0.025 1364 1494 -1.10 -0.040 971 1429 0.005731 0.008605 J10 1 2 2725 -1.50 -0.177 yagA b0267 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0268 874 971 -1.11 -0.046 1077 1144 -1.06 -0.026 923 1110 0.005445 0.006684 G22 2 2 2100 -1.23 -0.089 yagE b0268 putative lyase/synthase Putative enzymes putative enzyme; Not classified b0269 4879 4684 1.04 0.018 2774 2927 -1.06 -0.023 4781 2850 0.028213 0.017159 G11 4 2 1868 1.64 0.216 yagF b0269 putative dehydratase Putative enzymes putative enzyme; Not classified b0270 2841 2828 1.00 0.002 1608 1573 1.02 0.010 2835 1591 0.016726 0.009577 M1 1 1 7 1.75 0.242 yagG b0270 putative permease Putative transport proteins putative transport; Not classified b0271 387 237 1.00 0.000 402 393 1.00 0.000 312 398 0.001843 0.002394 O1 1 1 8 -1.00 0.000 yagH b0271 putative beta-xylosidase (EC 3.2.1.37) Putative enzymes putative enzyme; Not classified b0272 1785 2254 -1.26 -0.101 1996 2240 -1.12 -0.050 2020 2118 0.011918 0.012749 E21 2 1 179 -1.07 -0.029 yagI b0272 putative regulator Putative regulatory proteins putative regulator; Not classified b0273 6857 8296 -1.21 -0.083 3753 3610 1.04 0.017 7576 3681 0.044707 0.022164 I11 4 2 1869 2.02 0.305 argF b0273 "ornithine carbamoyltransferase 2, chain F" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b0274 1768 1549 1.14 0.057 1061 1025 1.03 0.015 1658 1043 0.009785 0.006279 I7 4 1 317 1.56 0.193 insB_3 b0274 IS1 protein InsB "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0275 15303 14115 1.08 0.035 8021 7703 1.04 0.018 14709 7862 0.086793 0.047334 K7 4 1 318 1.83 0.263 insA_3 b0275 IS1 protein InsA "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0276 349 154 1.00 0.000 367 179 1.00 0.000 251 273 0.001484 0.001643 L10 1 2 2726 -1.00 0.000 yagJ b0276 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0277 317 332 -1.00 0.000 277 292 -1.00 0.000 325 284 0.001916 0.001713 N10 1 2 2727 1.00 0.000 yagK b0277 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0278 1913 1851 1.03 0.014 1231 1333 -1.08 -0.035 1882 1282 0.011106 0.007721 G21 2 1 180 1.44 0.158 yagL b0278 DNA-binding protein Putative regulatory proteins phenotype; Not classified b0279 581 671 -1.16 -0.063 405 385 1.00 0.000 626 395 0.003695 0.002379 P10 1 2 2728 1.23 0.090 yagM b0279 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0280 401 332 1.00 0.000 167 121 1.00 0.000 366 144 0.002162 0.000864 B12 1 2 2729 1.00 0.000 yagN b0280 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0281 534 574 -1.07 -0.031 431 389 1.00 0.000 554 410 0.003271 0.002466 M7 4 1 319 1.09 0.038 intF b0281 putative phage integrase "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b0282 3587 3643 -1.02 -0.007 2912 3108 -1.07 -0.028 3615 3010 0.021331 0.018123 D12 1 2 2730 1.18 0.071 yagP b0282 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0283 991 1223 -1.23 -0.091 1358 1326 1.02 0.011 1107 1342 0.006533 0.008079 F12 1 2 2731 -1.24 -0.092 yagQ b0283 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0284 2103 2056 1.02 0.010 2232 2069 1.08 0.033 2080 2150 0.012271 0.012947 H12 1 2 2732 -1.06 -0.023 yagR b0284 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0285 8643 9240 -1.07 -0.029 6942 6738 1.03 0.013 8942 6840 0.052762 0.041182 J12 1 2 2733 1.28 0.108 yagS b0285 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0286 4578 4146 1.10 0.043 4368 4685 -1.07 -0.030 4362 4526 0.025738 0.027251 I22 2 2 2101 -1.06 -0.025 yagT b0286 putative xanthine dehydrogenase (EC 1.1.1.20) Putative enzymes putative enzyme; Not classified b0287 2652 2713 -1.02 -0.010 1289 1478 -1.15 -0.060 2683 1383 0.015830 0.008329 L12 1 2 2734 1.90 0.279 yagU b0287 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0288 -113 347 -1.00 0.000 201 206 -1.00 0.000 117 203 0.000692 0.001224 J6 2 1 1269 -1.00 0.000 ykgJ b0288 putative ferredoxin Putative enzymes putative carrier; Not classified b0289 945 1055 -1.12 -0.048 643 817 -1.27 -0.104 1000 730 0.005900 0.004398 N12 1 2 2735 1.34 0.128 yagV b0289 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0290 -130 98 -1.00 0.000 56 129 -1.00 0.000 -16 92 -0.000095 0.000556 I21 2 1 181 -1.00 0.000 yagW b0290 putative receptor Putative factors putative factor; Not classified b0291 895 814 1.10 0.041 1300 1030 1.26 0.101 855 1165 0.005042 0.007013 P12 1 2 2736 -1.39 -0.143 yagX b0291 putative enzyme Putative enzymes putative enzyme; Not classified b0292 421 312 1.00 0.000 206 237 -1.00 0.000 366 221 0.002161 0.001333 B14 1 2 2737 1.00 0.000 yagY b0292 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0293 2211 1593 1.39 0.142 2112 1995 1.06 0.025 1902 2053 0.011224 0.012362 D14 1 2 2738 -1.10 -0.042 yagZ b0293 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0294 155 77 1.00 0.000 84 134 -1.00 0.000 116 109 0.000682 0.000656 K21 2 1 182 1.00 0.000 ykgK b0294 putative regulator Putative regulatory proteins putative regulator; Not classified b0295 228 -61 1.00 0.000 200 157 1.00 0.000 83 179 0.000491 0.001075 F14 1 2 2739 -1.00 0.000 ykgL b0295 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0296 22814 22403 1.02 0.008 18255 17155 1.06 0.027 22609 17705 0.133407 0.106594 O11 2 2 1680 1.25 0.097 ykgM b0296 putative ribosomal protein Putative cell structure putative structure; Not classified b0297 826 701 1.18 0.071 1258 1190 1.06 0.024 764 1224 0.004506 0.007369 O4 3 1 592 -1.64 -0.214 eaeH b0297 "attaching and effacing protein, pathogenesis factor" Cell processes factor; Not classified b0298 2263 2037 1.11 0.046 1158 1109 1.04 0.019 2150 1134 0.012688 0.006825 H14 1 2 2740 1.86 0.269 b0298 b0298 putative factor Putative factors putative factor; Not classified b0299 1891 1875 1.01 0.004 620 631 -1.02 -0.007 1883 626 0.011110 0.003767 O7 4 1 320 2.95 0.470 tra5_5 b0299 IS3 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0300 1398 1261 1.11 0.045 1146 1389 -1.21 -0.083 1330 1267 0.007847 0.007631 M21 2 1 183 1.03 0.012 ykgA b0300 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b0301 69 129 -1.00 0.000 102 164 -1.00 0.000 99 133 0.000581 0.000800 J14 1 2 2741 -1.00 0.000 ykgB b0301 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0302 -17 48 -1.00 0.000 13 10 1.00 0.000 16 12 0.000092 0.000070 L14 1 2 2742 1.00 0.000 b0302 b0302 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0303 466 526 -1.05 -0.022 312 393 -1.00 0.000 496 352 0.002925 0.002120 N14 1 2 2743 1.00 0.000 ykgI b0303 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0304 2658 2903 -1.09 -0.038 1510 1433 1.05 0.023 2780 1472 0.016406 0.008859 B9 4 1 1089 1.85 0.268 ykgC b0304 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0305 3285 3269 1.00 0.002 7195 7049 1.02 0.009 3277 7122 0.019337 0.042879 O21 2 1 184 -2.22 -0.346 ykgD b0305 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b0306 560 464 1.12 0.049 305 471 -1.00 0.000 512 388 0.003020 0.002336 P14 1 2 2744 1.01 0.003 ykgE b0306 putative dehydrogenase subunit Putative enzymes putative enzyme; Not classified b0307 7220 7718 -1.07 -0.029 2986 3012 -1.01 -0.004 7469 2999 0.044072 0.018057 B16 1 2 2745 2.44 0.388 ykgF b0307 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0308 463 852 -1.70 -0.231 287 419 -1.00 0.000 657 353 0.003878 0.002124 B15 2 1 921 1.29 0.111 ykgG b0308 putative transporter Putative transport proteins putative transport; Not classified b0309 253 281 -1.00 0.000 319 165 1.00 0.000 267 242 0.001576 0.001457 D16 1 2 2746 1.00 0.000 b0309 b0309 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0310 678 564 1.20 0.080 321 383 -1.00 0.000 621 352 0.003665 0.002118 F16 1 2 2747 1.22 0.087 ykgH b0310 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0311 4231 3587 1.18 0.072 2261 2424 -1.07 -0.030 3909 2343 0.023066 0.014103 D9 4 1 1090 1.64 0.214 betA b0311 "choline dehydrogenase, a flavoprotein" Cell processes enzyme; Osmotic adaptation b0312 706 561 1.26 0.100 576 366 1.15 0.061 633 471 0.003737 0.002836 F9 4 1 1091 1.25 0.095 betB b0312 NAD+-dependent betaine aldehyde dehydrogenase Cell processes enzyme; Osmotic adaptation b0313 596 649 -1.09 -0.037 239 273 -1.00 0.000 623 256 0.003673 0.001542 H9 4 1 1092 1.22 0.088 betI b0313 probably transcriptional repressor of bet genes Cell processes putative regulator; Osmotic adaptation b0314 24620 19066 1.29 0.111 38523 37414 1.03 0.013 21843 37968 0.128887 0.228589 G18 3 1 644 -1.77 -0.249 betT b0314 high-affinity choline transport Transport and binding proteins transport; Transport of small molecules: Other b0315 993 800 1.24 0.094 382 293 1.00 0.000 896 338 0.005290 0.002032 H16 1 2 2748 1.76 0.246 yahA b0315 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0316 342 626 -1.25 -0.098 440 851 -1.70 -0.231 484 645 0.002857 0.003886 A23 2 1 185 -1.30 -0.112 yahB b0316 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0317 1612 998 1.62 0.208 772 758 1.02 0.008 1305 765 0.007702 0.004606 J16 1 2 2749 1.67 0.223 yahC b0317 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0318 301 495 -1.00 0.000 346 799 -1.60 -0.203 398 572 0.002347 0.003445 C23 2 1 186 -1.15 -0.060 yahD b0318 putative transcription factor Putative regulatory proteins putative regulator; Not classified b0319 473 598 -1.20 -0.078 395 398 -1.00 0.000 536 397 0.003160 0.002387 L16 1 2 2750 1.05 0.023 yahE b0319 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0320 4009 3709 1.08 0.034 2480 2419 1.03 0.011 3859 2449 0.022772 0.014746 N16 1 2 2751 1.54 0.189 yahF b0320 putative oxidoreductase subunit Putative enzymes putative enzyme; Not classified b0321 3401 3363 1.01 0.005 2418 2475 -1.02 -0.010 3382 2446 0.019954 0.014728 P16 1 2 2752 1.35 0.132 yahG b0321 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0322 7067 6180 1.14 0.058 4452 4109 1.08 0.035 6624 4281 0.039084 0.025771 B18 1 2 2753 1.52 0.181 yahH b0322 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0323 1693 1993 -1.18 -0.071 1758 1510 1.16 0.066 1843 1634 0.010874 0.009838 P19 1 2 2384 1.11 0.043 yahI b0323 putative kinase (EC 2.7.2.2). Putative enzymes putative enzyme; Not classified b0324 15331 16953 -1.11 -0.044 64301 60204 1.07 0.029 16142 62252 0.095248 0.374793 B21 1 2 2385 -3.93 -0.595 yahJ b0324 putative deaminase Putative enzymes putative enzyme; Not classified b0325 5170 4840 1.07 0.029 5431 5090 1.07 0.028 5005 5260 0.029531 0.031670 D21 1 2 2386 -1.07 -0.030 yahK b0325 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0326 1300 1390 -1.07 -0.029 681 634 1.07 0.031 1345 658 0.007935 0.003960 D18 1 2 2754 2.00 0.302 yahL b0326 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0327 1313 928 1.41 0.151 1149 1210 -1.05 -0.022 1121 1180 0.006614 0.007102 F18 1 2 2755 -1.07 -0.031 yahM b0327 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0328 56574 58816 -1.04 -0.017 52907 52010 1.02 0.007 57695 52459 0.340439 0.315832 L6 2 1 1270 1.08 0.033 yahN b0328 putative cytochrome subunit of dehydrogenase Putative enzymes putative enzyme; Not classified b0329 9028 5667 1.59 0.202 318 409 -1.00 0.000 7347 364 0.043354 0.002189 H18 1 2 2756 14.45 1.160 yahO b0329 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0330 4512 5239 -1.16 -0.065 5221 6800 -1.30 -0.115 4875 6010 0.028767 0.036186 E23 2 1 187 -1.26 -0.100 prpR b0330 regulator for prp operon Regulatory function regulator; Not classified b0331 893 883 1.01 0.005 961 1130 -1.18 -0.070 888 1046 0.005239 0.006295 K22 2 2 2102 -1.20 -0.080 prpB b0331 putative phosphonomutase 2 Putative enzymes putative enzyme; Not classified b0332 386 397 -1.00 0.000 413 431 -1.00 0.000 391 422 0.002309 0.002539 J18 1 2 2757 -1.00 0.000 b0332 b0332 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0333 819 1293 -1.58 -0.198 1961 2072 -1.06 -0.024 1056 2017 0.006231 0.012143 M22 2 2 2103 -1.95 -0.290 prpC b0333 putative citrate synthase; propionate metabolism? Putative enzymes putative enzyme; Not classified b0334 1331 1407 -1.06 -0.024 1162 1125 1.03 0.014 1369 1143 0.008077 0.006884 L18 1 2 2758 1.17 0.069 prpD b0334 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0335 4207 3659 1.15 0.061 4158 3412 1.22 0.086 3933 3785 0.023207 0.022787 N18 1 2 2759 1.02 0.008 prpE b0335 putative propionyl-CoA synthetase Putative enzymes putative enzyme; Not classified b0336 1897 2677 -1.41 -0.149 1228 1413 -1.15 -0.061 2287 1320 0.013495 0.007950 I18 3 1 645 1.70 0.230 codB b0336 cytosine permease/transport Transport and binding proteins "transport; Transport of small molecules: Nucleosides, purines, pyrimidines" b0337 1100 955 1.15 0.062 1438 1253 1.15 0.060 1028 1345 0.006063 0.008099 I18 1 2 1989 -1.34 -0.126 codA b0337 cytosine deaminase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b0338 2427 2601 -1.07 -0.030 1872 1687 1.11 0.045 2514 1780 0.014835 0.010715 A3 1 1 9 1.38 0.141 cynR b0338 cyn operon positive regulator Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b0339 3964 3021 1.31 0.118 4850 4994 -1.03 -0.013 3492 4922 0.020608 0.029631 O22 2 2 2104 -1.44 -0.158 cynT b0339 carbonic anhydrase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0340 178 69 1.00 0.000 164 33 1.00 0.000 123 98 0.000729 0.000590 L6 2 3 2105 1.00 0.000 cynS b0340 "cyanate aminohydrolase, cyanase" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0341 2657 2097 1.27 0.103 540 789 -1.46 -0.165 2377 665 0.014026 0.004003 K18 3 1 646 3.50 0.545 cynX b0341 cyanate transport Transport and binding proteins transport; Transport of small molecules: Anions b0342 967 849 1.14 0.057 504 271 1.01 0.003 908 388 0.005356 0.002334 C3 1 1 10 1.79 0.252 lacA b0342 thiogalactoside acetyltransferase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0343 4892 4843 1.01 0.004 3208 3188 1.01 0.003 4868 3198 0.028723 0.019254 M18 3 1 647 1.49 0.174 lacY b0343 galactoside permease (M protein) Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b0344 240 298 -1.00 0.000 77 188 -1.00 0.000 269 132 0.001587 0.000797 E3 1 1 11 1.00 0.000 lacZ b0344 beta-D-galactosidase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0345 4812 4153 1.16 0.064 3758 3983 -1.06 -0.025 4482 3870 0.026449 0.023302 G3 1 1 12 1.14 0.055 lacI b0345 transcriptional repressor of the lac operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b0346 1265 1624 -1.28 -0.109 2015 2052 -1.02 -0.008 1445 2033 0.008526 0.012242 G23 2 1 188 -1.44 -0.157 mhpR b0346 transcriptional regulator for mhp operon Regulatory function regulator; Not classified b0347 1235 810 1.53 0.184 1420 1071 1.33 0.123 1022 1246 0.006033 0.007499 P18 1 2 2760 -1.24 -0.094 mhpA b0347 3-(3-hydroxyphenyl)propionate hydroxylase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0348 575 514 1.12 0.049 408 375 1.00 0.000 545 392 0.003214 0.002357 I3 1 1 13 1.07 0.030 mhpB b0348 "2,3-dihydroxyphenylpropionate 1,2-dioxygenase" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0349 338 439 -1.00 0.000 502 253 1.00 0.002 389 378 0.002294 0.002274 K3 1 1 14 1.00 0.000 mhpC b0349 "2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0350 2403 3112 -1.30 -0.112 2028 1850 1.10 0.040 2757 1939 0.016270 0.011673 F21 1 2 2387 1.39 0.144 mhpD b0350 2-keto-4-pentenoate hydratase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0351 4990 4189 1.19 0.076 2365 2551 -1.08 -0.033 4589 2458 0.027080 0.014799 M3 1 1 15 1.83 0.262 mhpF b0351 acetaldehyde dehydrogenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0352 1153 812 1.42 0.153 1078 922 1.17 0.068 983 1000 0.005798 0.006021 O3 1 1 16 -1.04 -0.016 mhpE b0352 4-hydroxy-2-ketovalerate aldolase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0353 1276 2086 -1.63 -0.213 2451 3068 -1.25 -0.097 1681 2760 0.009919 0.016616 D15 2 1 922 -1.68 -0.224 mhpT b0353 putative transport protein Putative transport proteins putative transport; Not classified b0354 3376 4228 -1.25 -0.098 2421 2816 -1.16 -0.066 3802 2618 0.022433 0.015764 F18 4 1 1507 1.42 0.153 yaiL b0354 nucleoprotein/polynucleotide-associated enzyme Putative enzymes putative enzyme; Not classified b0355 723 820 -1.13 -0.055 1039 1182 -1.14 -0.056 771 1111 0.004552 0.006686 C24 2 2 2106 -1.47 -0.167 yaiM b0355 putative esterase (EC 3.1.1.1) Putative enzymes putative enzyme; Not classified b0356 1810 1924 -1.06 -0.026 591 905 -1.53 -0.185 1867 748 0.011018 0.004502 N6 2 1 1271 2.45 0.389 adhC b0356 "alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent" Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b0357 559 129 1.12 0.048 1311 1067 1.23 0.089 344 1189 0.002029 0.007157 A6 3 1 593 -2.39 -0.378 yaiN b0357 putative alpha helix chain "Hypothetical, unclassified, unknown" phenotype; Not classified b0358 1729 1605 1.08 0.032 1039 899 1.16 0.063 1667 969 0.009837 0.005832 B20 1 2 2761 1.69 0.227 yaiO b0358 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0359 952 714 1.33 0.125 512 385 1.02 0.010 833 449 0.004914 0.002701 D20 1 2 2762 1.64 0.214 b0359 b0359 putative transferase Putative enzymes putative enzyme; Not classified b0360 24851 22332 1.11 0.046 12488 12439 1.00 0.002 23592 12464 0.139208 0.075037 F20 1 2 2763 1.86 0.268 yi21_1 b0360 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0361 3639 4313 -1.19 -0.074 6701 7502 -1.12 -0.049 3976 7101 0.023462 0.042755 A21 1 2 1617 -1.82 -0.261 yi22_1 b0361 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0362 3006 2919 1.03 0.013 1494 1634 -1.09 -0.039 2963 1564 0.017481 0.009417 H20 1 2 2764 1.86 0.269 b0362 b0362 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0363 444 337 1.00 0.000 224 448 -1.00 0.000 391 336 0.002306 0.002022 E10 1 1 419 1.00 0.000 yaiP b0363 polysaccharide metabolism Putative enzymes putative enzyme; Not classified b0364 462 489 -1.00 0.000 289 239 1.00 0.000 475 264 0.002806 0.001588 J20 1 2 2765 1.00 0.000 yaiS b0364 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0365 514 790 -1.54 -0.187 90 442 -1.00 0.000 652 266 0.003846 0.001601 F15 2 1 923 1.28 0.108 tauA b0365 taurine transport system periplasmic protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0366 1679 1934 -1.15 -0.061 1451 1584 -1.09 -0.038 1806 1517 0.010658 0.009136 E24 2 2 2107 1.17 0.067 tauB b0366 taurine ATP-binding component of a transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0367 2932 3604 -1.23 -0.090 2040 2169 -1.06 -0.027 3268 2104 0.019285 0.012669 H15 2 1 924 1.52 0.182 tauC b0367 taurine transport system permease protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0368 715 459 1.43 0.155 481 188 1.00 0.000 587 334 0.003461 0.002011 L20 1 2 2766 1.15 0.062 tauD b0368 "taurine dioxygenase, 2-oxoglutarate-dependent" Putative enzymes putative enzyme; Not classified b0369 330 276 1.00 0.000 186 322 -1.00 0.000 303 254 0.001789 0.001532 K20 4 2 2286 1.00 0.000 hemB b0369 5-aminolevulinate dehydratase = porphobilinogen synthase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b0370 207 95 1.00 0.000 86 38 1.00 0.000 151 62 0.000890 0.000375 N20 1 2 2767 1.00 0.000 b0370 b0370 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0371 7298 8343 -1.14 -0.058 10172 10690 -1.05 -0.022 7821 10431 0.046148 0.062801 P20 1 2 2768 -1.36 -0.134 yaiT b0371 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0372 7853 8092 -1.03 -0.013 6478 6506 -1.00 -0.002 7972 6492 0.047042 0.039083 A9 4 1 321 1.20 0.080 tra5_1 b0372 IS3 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0373 139 23 1.00 0.000 81 65 1.00 0.000 81 73 0.000478 0.000440 B22 1 2 2769 1.00 0.000 b0373 b0373 putative factor Putative factors putative factor; Not classified b0374 868 600 1.45 0.161 548 704 -1.29 -0.109 734 626 0.004331 0.003770 H21 1 2 2388 1.15 0.060 yaiU b0374 putative flagellin structural protein Putative cell structure putative structure; Not classified b0375 417 440 -1.00 0.000 603 549 1.10 0.041 428 576 0.002528 0.003469 D22 1 2 2770 -1.16 -0.063 yaiV b0375 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0376 989 1285 -1.30 -0.114 1053 1119 -1.06 -0.026 1137 1086 0.006711 0.006539 F22 1 2 2771 1.03 0.011 yaiH b0376 putative enzyme Putative enzymes putative enzyme; Not classified b0377 617 829 -1.34 -0.129 342 385 -1.00 0.000 723 364 0.004265 0.002189 J9 4 1 1093 1.42 0.153 sbmA b0377 "sensitivity to microcin B17, possibly envelop protein" Putative factors putative membrane; Drug/analog sensitivity b0378 4268 3549 1.20 0.080 4904 5065 -1.03 -0.014 3909 4984 0.023063 0.030009 H22 1 2 2772 -1.30 -0.114 yaiW b0378 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0379 417 371 1.00 0.000 277 271 1.00 0.000 394 274 0.002325 0.001650 J22 1 2 2773 1.00 0.000 b0379 b0379 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0380 794 965 -1.22 -0.085 914 758 1.21 0.082 879 836 0.005188 0.005033 L22 1 2 2774 1.03 0.013 b0380 b0380 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0381 554 511 1.09 0.035 885 1120 -1.27 -0.102 533 1003 0.003143 0.006036 G10 1 1 420 -1.92 -0.283 ddlA b0381 D-alanine-D-alanine ligase A Cell structure "enzyme; Murein sacculus, peptidoglycan" b0382 1423 1271 1.12 0.049 247 267 -1.00 0.000 1347 257 0.007951 0.001546 N22 1 2 2775 2.65 0.423 yaiB b0382 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0383 283 766 -1.53 -0.185 204 579 -1.16 -0.064 525 392 0.003097 0.002359 G24 2 2 2108 1.03 0.014 phoA b0383 alkaline phosphatase Central intermediary metabolism enzyme; Central intermediary metabolism: Phosphorus compounds b0384 2292 1851 1.24 0.093 1795 2021 -1.13 -0.052 2072 1908 0.012225 0.011485 I24 2 2 2109 1.06 0.027 psiF b0384 induced by phosphate starvation Cell processes phenotype; Central intermediary metabolism: Phosphorus compounds b0385 678 675 1.00 0.002 789 647 1.22 0.086 677 718 0.003993 0.004323 P22 1 2 2776 -1.08 -0.035 yaiC b0385 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0386 3475 3554 -1.02 -0.010 2141 3257 -1.52 -0.182 3514 2699 0.020736 0.016249 K11 4 2 1870 1.28 0.106 proC b0386 pyrroline-5-carboxylate reductase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Proline b0387 5082 4798 1.06 0.025 3315 3036 1.09 0.038 4940 3176 0.029151 0.019119 B24 1 2 2777 1.52 0.183 yaiI b0387 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0388 5422 6418 -1.18 -0.073 3728 4537 -1.22 -0.085 5920 4132 0.034933 0.024879 M11 4 2 1871 1.40 0.147 aroL b0388 shikimate kinase II Amino acid biosynthesis enzyme; Amino acid biosynthesis: Chorismate b0389 5590 5059 1.10 0.043 2162 2417 -1.12 -0.048 5324 2290 0.031416 0.013785 D24 1 2 2778 2.28 0.358 yaiA b0389 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0390 8918 8957 -1.00 -0.002 6449 8255 -1.28 -0.107 8938 7352 0.052738 0.044261 O11 4 2 1872 1.19 0.076 aroM b0390 "protein of aro operon, regulated by aroR" Amino acid biosynthesis phenotype; Amino acid biosynthesis: Chorismate b0391 2101 2127 -1.01 -0.005 844 673 1.25 0.098 2114 759 0.012476 0.004567 F24 1 2 2779 2.73 0.436 yaiE b0391 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0392 6371 6775 -1.06 -0.027 4550 4304 1.06 0.024 6573 4427 0.038786 0.026653 H24 1 2 2780 1.46 0.163 b0392 b0392 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0393 6425 6000 1.07 0.030 3946 3992 -1.01 -0.005 6213 3969 0.036659 0.023894 J24 1 2 2781 1.53 0.186 yaiD b0393 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0394 800 982 -1.23 -0.089 484 541 -1.08 -0.034 891 512 0.005258 0.003083 L24 1 2 2782 1.71 0.232 yajF b0394 possible NAGC-like transcriptional regulator Putative regulatory proteins putative regulator; Not classified b0395 254 411 -1.00 0.000 283 311 -1.00 0.000 333 297 0.001963 0.001789 N24 1 2 2783 1.00 0.000 b0395 b0395 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0396 3230 2454 1.32 0.119 2699 3275 -1.21 -0.084 2842 2987 0.016770 0.017983 A5 1 1 17 -1.07 -0.030 araJ b0396 involved in either transport or processing of arabinose polymers Transport and binding proteins transport; Degradation of small molecules: Carbon compounds b0397 1487 1506 -1.01 -0.006 1411 1361 1.04 0.016 1496 1386 0.008829 0.008345 C21 1 2 1618 1.06 0.024 sbcC b0397 ATP-dependent dsDNA exonuclease "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b0398 6568 6638 -1.01 -0.005 5802 5549 1.05 0.019 6603 5675 0.038961 0.034169 E21 1 2 1619 1.14 0.057 sbcD b0398 ATP-dependent dsDNA exonuclease "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b0399 173 159 1.00 0.000 -40 201 -1.00 0.000 166 80 0.000978 0.000482 E9 2 1 131 1.00 0.000 phoB b0399 "positive response regulator for pho regulon, sensor is PhoR (or CreC)" Regulatory function regulator; Global regulatory functions b0400 457 470 -1.00 0.000 452 380 1.00 0.000 463 416 0.002733 0.002505 G9 2 1 132 1.00 0.000 phoR b0400 positive and negative sensor protein for pho regulon Regulatory function enzyme; Global regulatory functions b0401 1365 1638 -1.20 -0.079 546 845 -1.55 -0.190 1501 696 0.008858 0.004189 O18 3 1 648 2.11 0.325 brnQ b0401 branched chain amino acid transport system II carrier protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0402 2288 2218 1.03 0.013 2339 2771 -1.18 -0.074 2253 2555 0.013294 0.015381 J8 2 3 2784 -1.16 -0.063 proY b0402 proline permease transport protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0403 1106 582 1.90 0.279 529 525 1.01 0.003 844 527 0.004982 0.003175 C5 1 1 18 1.57 0.196 malZ b0403 maltodextrin glucosidase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0404 589 396 1.18 0.071 361 448 -1.00 0.000 492 405 0.002906 0.002437 I10 1 1 421 1.00 0.000 yajB b0404 putative glycoprotein "Hypothetical, unclassified, unknown" orf; Not classified b0405 10133 12132 -1.20 -0.078 8534 11480 -1.35 -0.129 11132 10007 0.065689 0.060249 A13 2 2 1681 1.09 0.038 queA b0405 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0406 1349 1716 -1.27 -0.105 2294 2650 -1.16 -0.063 1532 2472 0.009042 0.014881 C13 2 2 1682 -1.65 -0.216 tgt b0406 tRNA-guanine transglycosylase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0407 3635 3558 1.02 0.009 3066 3066 1.00 0.000 3597 3066 0.021224 0.018458 B2 2 2 2785 1.15 0.061 yajC b0407 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0408 2947 2199 1.34 0.127 3920 3590 1.09 0.038 2573 3755 0.015182 0.022607 A20 3 1 649 -1.49 -0.173 secD b0408 "protein secretion; membrane protein, part of the channel" Transport and binding proteins "transport; Protein, peptide secretion" b0409 844 521 1.62 0.210 1008 938 1.07 0.031 682 973 0.004026 0.005856 C20 3 1 650 -1.45 -0.163 secF b0409 "protein secretion, membrane protein" Transport and binding proteins "transport; Protein, peptide secretion" b0410 7547 4721 1.60 0.204 2751 2791 -1.01 -0.006 6134 2771 0.036196 0.016682 D2 2 2 2786 2.17 0.336 yajD b0410 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0411 1288 1174 1.10 0.040 2495 2536 -1.02 -0.007 1231 2515 0.007263 0.015144 E20 3 1 651 -2.09 -0.319 tsx b0411 nucleoside channel; receptor of phage T6 and colicin K Transport and binding proteins "transport; Transport of small molecules: Nucleosides, purines, pyrimidines" b0412 433 549 -1.10 -0.041 698 521 1.34 0.127 491 610 0.002897 0.003670 F2 2 2 2787 -1.22 -0.088 yajI b0412 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0413 3677 4298 -1.17 -0.068 5538 5635 -1.02 -0.008 3988 5587 0.023529 0.033635 H2 2 2 2788 -1.43 -0.155 ybaD b0413 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0414 1477 1793 -1.21 -0.084 1807 1896 -1.05 -0.021 1635 1851 0.009647 0.011145 M20 4 2 2287 -1.16 -0.063 ribD b0414 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Riboflavin" b0415 4273 4439 -1.04 -0.017 3047 3379 -1.11 -0.045 4356 3213 0.025704 0.019344 O20 4 2 2288 1.33 0.123 ribH b0415 "riboflavin synthase, beta chain" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Riboflavin" b0416 1258 925 1.36 0.134 1870 1605 1.17 0.067 1092 1738 0.006442 0.010462 G21 1 2 1620 -1.62 -0.211 nusB b0416 transcription termination; L factor "Transcription, RNA processing and degradation" "factor; RNA synthesis, modification, DNA transcription" b0417 483 698 -1.40 -0.145 854 1000 -1.17 -0.068 590 927 0.003483 0.005583 I23 2 1 189 -1.60 -0.205 thiL b0417 thiamin-monophosphate kinase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b0418 4340 3016 1.44 0.158 6833 7016 -1.03 -0.011 3678 6924 0.021701 0.041688 J2 2 2 2789 -1.92 -0.284 pgpA b0418 phosphatidylglycerophosphatase Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b0419 2169 1781 1.22 0.085 1032 737 1.40 0.146 1975 885 0.011654 0.005326 K24 2 2 2110 2.19 0.340 yajO b0419 putative NAD(P)H-dependent xylose reductase Putative enzymes putative enzyme; Not classified b0420 2020 2202 -1.09 -0.038 2601 2378 1.09 0.039 2111 2490 0.012456 0.014989 J21 1 2 2389 -1.20 -0.080 dxs b0420 1-deoxyxylulose-5-phosphate synthase; flavoprotein Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0421 2073 2012 1.03 0.013 2665 2785 -1.04 -0.019 2042 2725 0.012052 0.016407 A22 4 2 2289 -1.36 -0.134 ispA b0421 geranyltranstransferase (farnesyldiphosphate synthase) "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b0422 647 403 1.29 0.112 686 627 1.09 0.039 525 656 0.003097 0.003952 I21 1 2 1621 -1.28 -0.106 xseB b0422 "exonuclease VII, small subunit" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b0423 1690 1232 1.37 0.137 1751 1895 -1.08 -0.034 1461 1823 0.008620 0.010978 L2 2 2 2790 -1.27 -0.105 yajK b0423 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0424 636 545 1.17 0.067 586 394 1.17 0.069 590 490 0.003483 0.002950 N2 2 2 2791 1.16 0.065 thiJ b0424 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b0425 1058 1370 -1.30 -0.112 1180 1211 -1.03 -0.011 1214 1196 0.007163 0.007200 P2 2 2 2792 -1.01 -0.002 apbA b0425 "involved in thiamin biosynthesis, alternative pyrimidine biosynthesis" "Biosynthesis of cofactors, prosthetic groups and carriers" phenotype; Not classified b0426 2980 2322 1.28 0.108 2123 2034 1.04 0.019 2651 2078 0.015642 0.012513 B4 2 2 2793 1.25 0.097 yajQ b0426 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0427 933 889 1.05 0.021 800 837 -1.05 -0.019 911 818 0.005376 0.004927 L9 4 1 1094 1.09 0.038 yajR b0427 putative transport protein Putative transport proteins putative transport; Not classified b0428 10069 9746 1.03 0.014 11363 9365 1.21 0.084 9908 10364 0.058462 0.062397 P6 2 1 1272 -1.07 -0.028 cyoE b0428 protoheme IX farnesyltransferase (haeme O biosynthesis) Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b0429 3377 3373 1.00 0.001 4161 4893 -1.18 -0.070 3375 4527 0.019915 0.027256 B8 2 1 1273 -1.37 -0.136 cyoD b0429 cytochrome o ubiquinol oxidase subunit IV Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b0430 3339 3210 1.04 0.017 5263 5416 -1.03 -0.012 3274 5340 0.019320 0.032149 D8 2 1 1274 -1.66 -0.221 cyoC b0430 cytochrome o ubiquinol oxidase subunit III Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b0431 8059 8806 -1.09 -0.038 11754 14779 -1.26 -0.099 8432 13266 0.049756 0.079870 F8 2 1 1275 -1.61 -0.206 cyoB b0431 cytochrome o ubiquinol oxidase subunit I Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b0432 3739 4968 -1.33 -0.123 12571 12074 1.04 0.017 4354 12323 0.025690 0.074189 H8 2 1 1276 -2.89 -0.461 cyoA b0432 cytochrome o ubiquinol oxidase subunit II Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b0433 397 592 -1.18 -0.073 574 591 -1.03 -0.013 495 583 0.002919 0.003508 N9 4 1 1095 -1.17 -0.068 ampG b0433 regulates beta-lactamase synthesis Regulatory function regulator; Drug/analog sensitivity b0434 2126 1777 1.20 0.078 2213 2373 -1.07 -0.030 1952 2293 0.011515 0.013805 L21 1 2 2390 -1.20 -0.079 yajG b0434 putative polymerase/proteinase Putative enzymes putative enzyme; Not classified b0435 6093 6080 1.00 0.001 1616 1643 -1.02 -0.007 6086 1630 0.035914 0.009811 K10 1 1 422 3.66 0.564 bolA b0435 possible regulator of murein genes Cell processes "putative regulator; Murein sacculus, peptidoglycan" b0436 4107 4135 -1.01 -0.003 5343 6052 -1.13 -0.054 4121 5697 0.024315 0.034302 P9 4 1 1096 -1.41 -0.149 tig b0436 trigger factor; a molecular chaperone involved in cell division Cell processes factor; Cell division b0437 -3948 2646 -5.29 -0.724 -2143 7015 -14.03 -1.147 -651 2436 -0.003839 0.014664 E13 2 2 1683 -4.89 -0.689 clpP b0437 "ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5" Cell processes "enzyme; Degradation of proteins, peptides, glyco" b0438 6742 7246 -1.07 -0.031 3922 4517 -1.15 -0.061 6994 4219 0.041269 0.025403 G13 2 2 1684 1.62 0.211 clpX b0438 "ATP-dependent specificity component of clpP serine protease, chaperone" Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b0439 13487 13302 1.01 0.006 8398 8734 -1.04 -0.017 13394 8566 0.079034 0.051573 I9 2 1 133 1.53 0.185 lon b0439 "DNA-binding, ATP-dependent protease La; heat shock K-protein" Regulatory function enzyme; Global regulatory functions b0440 9777 9617 1.02 0.007 4847 5597 -1.15 -0.062 9697 5222 0.057219 0.031442 H18 4 1 1508 1.82 0.260 hupB b0440 "DNA-binding protein HU-beta, NS1 (HU-1)" "DNA replication, repair, restriction/modification" "factor; Basic proteins - synthesis, modification" b0441 2757 3895 -1.41 -0.150 3846 4983 -1.30 -0.112 3326 4415 0.019627 0.026580 I13 2 2 1685 -1.35 -0.132 ybaU b0441 putative protease maturation protein Putative factors putative factor; Not classified b0442 226 607 -1.21 -0.084 437 814 -1.63 -0.212 417 625 0.002458 0.003765 D4 2 2 2794 -1.26 -0.099 ybaV b0442 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0443 3130 3078 1.02 0.007 1517 1567 -1.03 -0.014 3104 1542 0.018317 0.009285 F4 2 2 2795 1.97 0.295 ybaW b0443 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0444 2568 2284 1.12 0.051 1636 1848 -1.13 -0.053 2426 1742 0.014316 0.010489 H4 2 2 2796 1.36 0.135 ybaX b0444 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0445 1390 2388 -1.72 -0.235 1982 2390 -1.21 -0.081 1889 2186 0.011147 0.013159 J4 2 2 2797 -1.18 -0.072 ybaE b0445 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0446 684 1438 -2.10 -0.323 616 667 -1.08 -0.034 1061 641 0.006260 0.003860 L4 2 2 2798 1.62 0.210 cof b0446 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0447 220 416 -1.00 0.000 526 558 -1.06 -0.026 318 542 0.001876 0.003261 K23 2 1 190 -1.09 -0.036 ybaO b0447 putative LRP-like transcriptional regulator Putative regulatory proteins putative regulator; Not classified b0448 5209 5012 1.04 0.017 4631 4767 -1.03 -0.012 5110 4699 0.030154 0.028290 G20 3 1 652 1.07 0.028 mdlA b0448 ATP-binding component of a transport system Putative transport proteins transport; Not classified b0449 2126 2148 -1.01 -0.004 927 851 1.09 0.037 2137 889 0.012610 0.005353 I20 3 1 653 2.36 0.372 mdlB b0449 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0450 113 504 -1.01 -0.004 140 266 -1.00 0.000 309 203 0.001821 0.001222 M24 2 2 2111 1.00 0.000 glnK b0450 nitrogen regulatory protein P-II 2 Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b0451 12724 13907 -1.09 -0.039 24332 23666 1.03 0.012 13316 23999 0.078571 0.144488 O24 2 2 2112 -1.84 -0.265 amtB b0451 probable ammonium transporter Putative transport proteins "putative transport; Central intermediary metabolism: Pool, multipurpose conversions" b0452 1034 726 1.43 0.154 1416 1493 -1.05 -0.023 880 1454 0.005193 0.008756 E8 2 2 2043 -1.69 -0.227 tesB b0452 acyl-CoA thioesterase II Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b0453 1049 851 1.23 0.091 101 193 -1.00 0.000 950 147 0.005606 0.000883 M10 1 1 423 1.87 0.272 ybaY b0453 glycoprotein/polysaccharide metabolism Putative factors phenotype; Not classified b0454 850 859 -1.01 -0.005 985 823 1.20 0.078 855 904 0.005043 0.005445 N4 2 2 2799 -1.08 -0.033 ybaZ b0454 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0456 2372 1444 1.64 0.216 1722 1431 1.20 0.080 1908 1577 0.011260 0.009494 P4 2 2 2800 1.19 0.074 ybaA b0456 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0457 3136 3680 -1.17 -0.069 1912 2376 -1.24 -0.094 3408 2144 0.020108 0.012910 B6 2 2 2801 1.56 0.192 ylaB b0457 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0458 741 657 1.13 0.052 2630 2154 1.22 0.087 699 2392 0.004125 0.014402 D6 2 2 2802 -3.49 -0.543 ylaC b0458 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0459 196 349 -1.00 0.000 324 369 -1.00 0.000 273 347 0.001610 0.002087 F6 2 2 2803 -1.00 0.000 ylaD b0459 putative transferase Putative enzymes putative enzyme; Not classified b0460 624 443 1.25 0.096 199 191 1.00 0.000 534 195 0.003148 0.001172 K13 2 2 1686 1.05 0.021 hha b0460 haemolysin expression modulating protein Regulatory function regulator; Proteins - translation and modification b0461 496 1070 -2.14 -0.331 708 970 -1.37 -0.137 783 839 0.004621 0.005052 H6 2 2 2804 -1.09 -0.039 ybaJ b0461 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0462 691 776 -1.12 -0.050 463 518 -1.04 -0.016 734 490 0.004330 0.002952 B11 4 1 1097 1.44 0.159 acrB b0462 acridine efflux pump Cell processes transport; Drug/analog sensitivity b0463 1293 1049 1.23 0.091 1200 1099 1.09 0.038 1171 1149 0.006909 0.006919 O10 1 1 424 -1.00 -0.001 acrA b0463 acridine efflux pump Cell processes transport; Drug/analog sensitivity b0464 1345 1738 -1.29 -0.111 1260 1342 -1.07 -0.028 1542 1301 0.009099 0.007834 D11 4 1 1098 1.16 0.065 acrR b0464 acrAB operon repressor Regulatory function regulator; Drug/analog sensitivity b0465 8611 8593 1.00 0.001 8520 7401 1.15 0.061 8602 7961 0.050757 0.047927 C6 3 1 594 1.06 0.025 aefA b0465 putative alpha helix protein "Hypothetical, unclassified, unknown" orf; Not classified b0466 13526 11838 1.14 0.058 13203 15426 -1.17 -0.068 12682 14314 0.074831 0.086179 J6 2 2 2805 -1.15 -0.061 ybaM b0466 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0467 4049 4875 -1.20 -0.081 3138 3218 -1.03 -0.011 4462 3178 0.026330 0.019133 J18 4 1 1509 1.38 0.139 priC b0467 primosomal replication protein N'' "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b0468 619 612 1.01 0.005 309 172 1.00 0.000 615 241 0.003630 0.001448 C9 4 1 322 1.21 0.083 ybaN b0468 putative gene 58 "Hypothetical, unclassified, unknown" orf; Not classified b0469 1032 887 1.16 0.066 1522 1583 -1.04 -0.017 959 1552 0.005660 0.009345 K18 1 2 1990 -1.65 -0.218 apt b0469 adenine phosphoribosyltransferase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b0470 1061 1225 -1.16 -0.063 974 1255 -1.29 -0.110 1143 1114 0.006745 0.006710 L18 4 1 1510 1.01 0.002 dnaX b0470 "DNA polymerase III, tau and gamma subunits; DNA elongation factor III" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0471 3468 3230 1.07 0.031 3241 3443 -1.06 -0.026 3349 3342 0.019761 0.020123 L6 2 2 2806 -1.02 -0.008 ybaB b0471 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0472 2209 2141 1.03 0.014 2046 2324 -1.14 -0.055 2175 2185 0.012835 0.013155 N18 4 1 1511 -1.02 -0.011 recR b0472 recombination and repair "DNA replication, repair, restriction/modification" "putative enzyme; DNA - replication, repair, restriction/modification" b0473 3053 2675 1.14 0.057 2810 2987 -1.06 -0.027 2864 2898 0.016901 0.017449 F11 4 1 1099 -1.03 -0.014 htpG b0473 "chaperone Hsp90, heat shock protein C 62.5" Cell processes factor; Chaperones b0474 4787 4228 1.13 0.054 5185 4472 1.16 0.064 4507 4828 0.026596 0.029070 M18 1 2 1991 -1.09 -0.039 adk b0474 adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b0475 1993 1934 1.03 0.013 1791 1664 1.08 0.032 1963 1728 0.011584 0.010401 C22 4 2 2290 1.11 0.047 hemH b0475 ferrochelatase: final enzyme of heme biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b0476 123 463 -1.00 0.000 220 329 -1.00 0.000 293 274 0.001729 0.001652 G8 2 2 2044 1.00 0.000 ybaC b0476 putative lipase (EC 3.1.1.-) "Hypothetical, unclassified, unknown" orf; Not classified b0477 2199 1309 1.68 0.225 3535 1939 1.82 0.261 1754 2737 0.010349 0.016480 O18 1 2 1992 -1.59 -0.202 gsk b0477 inosine-guanosine kinase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b0478 7215 7845 -1.09 -0.036 6458 6697 -1.04 -0.016 7530 6577 0.044434 0.039599 K20 3 1 654 1.12 0.050 ybaL b0478 putative transport protein Putative transport proteins putative transport; Not classified b0479 754 547 1.38 0.139 324 387 -1.00 0.000 650 356 0.003837 0.002142 H11 4 1 1100 1.28 0.107 fsr b0479 fosmidomycin resistance protein Putative transport proteins putative transport; Not classified b0480 14439 12790 1.13 0.053 11592 13319 -1.15 -0.060 13615 12455 0.080336 0.074989 A2 3 2 2113 1.07 0.030 ushA b0480 UDP-sugar hydrolase (5'-nucleotidase) Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b0481 1787 1702 1.05 0.021 1803 1560 1.16 0.063 1744 1681 0.010293 0.010123 N6 2 2 2807 1.02 0.007 ybaK b0481 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0482 3424 3157 1.08 0.035 3719 3328 1.12 0.048 3290 3524 0.019415 0.021214 C2 3 2 2114 -1.09 -0.038 ybaP b0482 putative ligase Putative enzymes putative enzyme; Not classified b0483 2898 3244 -1.12 -0.049 1717 1815 -1.06 -0.024 3071 1766 0.018121 0.010633 P6 2 2 2808 1.70 0.232 ybaQ b0483 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0484 1257 1247 1.01 0.004 768 649 1.18 0.073 1252 708 0.007389 0.004265 M20 3 1 655 1.73 0.239 ybaR b0484 putative ATPase Putative enzymes putative enzyme; Not classified b0485 2726 2066 1.32 0.120 298 473 -1.00 0.000 2396 386 0.014136 0.002322 N21 1 2 2391 4.71 0.673 ybaS b0485 putative glutaminase Putative enzymes putative enzyme; Not classified b0486 1199 1442 -1.20 -0.080 438 498 -1.00 0.000 1321 468 0.007792 0.002817 J15 2 1 925 2.60 0.415 ybaT b0486 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b0487 2136 2430 -1.14 -0.056 736 820 -1.11 -0.047 2283 778 0.013471 0.004686 J11 4 1 1101 2.87 0.459 ybbI b0487 putative transcriptional regulator Putative transport proteins putative transport; Not classified b0488 102 250 -1.00 0.000 315 256 1.00 0.000 176 285 0.001039 0.001718 B8 2 2 2809 -1.00 0.000 ybbJ b0488 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0489 1681 1553 1.08 0.034 501 499 1.00 0.001 1617 500 0.009542 0.003011 C2 3 1 578 3.17 0.501 ybbK b0489 putative protease Putative enzymes putative enzyme; Not classified b0490 824 1080 -1.31 -0.117 662 974 -1.47 -0.168 952 818 0.005619 0.004926 L15 2 1 926 1.14 0.057 ybbL b0490 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0491 974 1602 -1.65 -0.216 1313 1412 -1.08 -0.032 1288 1362 0.007598 0.008202 N15 2 1 927 -1.08 -0.033 ybbM b0491 putative metal resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b0492 1128 1133 -1.00 -0.002 857 832 1.03 0.013 1130 844 0.006669 0.005083 J8 2 1 1277 1.31 0.118 ybbN b0492 putative thioredoxin-like protein Putative enzymes putative enzyme; Not classified b0493 2496 1770 1.41 0.149 1278 1326 -1.04 -0.016 2133 1302 0.012586 0.007838 P21 1 2 2392 1.61 0.206 ybbO b0493 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0494 -83 363 -1.00 0.000 254 359 -1.00 0.000 140 307 0.000828 0.001845 I8 2 2 2045 -1.00 0.000 tesA b0494 acyl-CoA thioesterase I; also functions as protease I Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b0495 7903 6539 1.21 0.082 4139 4430 -1.07 -0.029 7221 4284 0.042607 0.025794 O20 3 1 656 1.65 0.218 ybbA b0495 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0496 4173 3703 1.13 0.052 8409 8190 1.03 0.011 3938 8300 0.023238 0.049969 B23 1 2 2393 -2.15 -0.333 ybbP b0496 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0497 6085 7023 -1.15 -0.062 6936 6964 -1.00 -0.002 6554 6950 0.038674 0.041844 D8 2 2 2810 -1.08 -0.034 rhsD b0497 rhsD protein in rhs element "Hypothetical, unclassified, unknown" orf; Transposon-related functions b0498 174 156 1.00 0.000 138 93 1.00 0.000 165 116 0.000975 0.000695 F8 2 2 2811 1.00 0.000 ybbC b0498 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0499 222 560 -1.12 -0.049 389 352 1.00 0.000 391 371 0.002305 0.002231 H8 2 2 2812 1.00 0.000 b0499 b0499 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0500 1070 1182 -1.11 -0.044 1035 1108 -1.07 -0.029 1126 1071 0.006644 0.006451 J8 2 2 2813 1.03 0.013 ybbD b0500 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0501 145 296 -1.00 0.000 240 294 -1.00 0.000 220 267 0.001300 0.001607 L8 2 2 2814 -1.00 0.000 b0501 b0501 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0502 2249 1984 1.13 0.054 1874 2438 -1.30 -0.114 2116 2156 0.012488 0.012981 N8 2 2 2815 -1.04 -0.017 b0502 b0502 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0503 2548 2332 1.09 0.038 1589 1359 1.17 0.068 2440 1474 0.014399 0.008873 E6 3 1 595 1.62 0.210 ybbB b0503 putative capsule anchoring protein Cell structure phenotype; Surface polysaccharides & antigens b0504 88 290 -1.00 0.000 25 131 -1.00 0.000 189 78 0.001115 0.000470 M23 2 1 191 1.00 0.000 ybbS b0504 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0505 3188 3255 -1.02 -0.009 1980 1823 1.09 0.036 3221 1901 0.019007 0.011446 P8 2 2 2816 1.66 0.220 ybbT b0505 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0506 956 1209 -1.27 -0.102 768 1005 -1.31 -0.117 1082 886 0.006387 0.005336 O23 2 1 192 1.20 0.078 ybbU b0506 putative regulator Putative regulatory proteins putative regulator; Not classified b0507 3225 1947 1.66 0.219 1954 1780 1.10 0.041 2586 1867 0.015260 0.011241 E2 3 2 2115 1.36 0.133 gcl b0507 glyoxylate carboligase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0508 1686 1029 1.64 0.215 1134 832 1.36 0.135 1358 983 0.008012 0.005918 G2 3 2 2116 1.35 0.132 gip b0508 glyoxylate-induced protein Central intermediary metabolism phenotype; Not classified b0509 217 218 -1.00 0.000 423 295 1.00 0.000 217 359 0.001282 0.002162 D23 1 2 2394 -1.00 0.000 ybbQ b0509 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0510 294 237 1.00 0.000 226 505 -1.01 -0.005 266 366 0.001568 0.002201 B10 2 2 2817 -1.00 0.000 ybbV b0510 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0511 1637 1545 1.06 0.025 368 985 -1.97 -0.294 1591 676 0.009387 0.004071 P15 2 1 928 2.31 0.363 ybbW b0511 putative transport protein Putative transport proteins putative transport; Not classified b0512 3128 3834 -1.23 -0.088 2457 2285 1.08 0.032 3481 2371 0.020540 0.014276 I2 3 2 2117 1.44 0.158 ybbX b0512 putative hydrolase Putative enzymes putative enzyme; Not classified b0513 1302 2257 -1.73 -0.239 3460 4147 -1.20 -0.079 1779 3804 0.010498 0.022900 B17 2 1 929 -2.18 -0.339 ybbY b0513 putative transport Putative transport proteins putative transport; Not classified b0514 456 519 -1.04 -0.016 325 510 -1.02 -0.008 487 417 0.002875 0.002512 D10 2 2 2818 1.00 0.000 ybbZ b0514 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0515 1119 1632 -1.46 -0.164 1518 2207 -1.45 -0.162 1375 1863 0.008115 0.011215 F10 2 2 2819 -1.38 -0.140 ylbA b0515 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0516 1273 1077 1.18 0.073 1183 1205 -1.02 -0.008 1175 1194 0.006933 0.007191 F23 1 2 2395 -1.04 -0.016 ylbB b0516 putative hydantoin utilization protein Putative enzymes phenotype; Not classified b0517 2674 5059 -1.89 -0.277 3417 3077 1.11 0.046 3866 3247 0.022815 0.019548 K2 3 2 2118 1.17 0.067 ylbC b0517 putative malate dehydrogenase (EC 1.1.1.37) Putative enzymes putative enzyme; Not classified b0518 575 638 -1.11 -0.045 969 865 1.12 0.049 607 917 0.003579 0.005523 H23 1 2 2396 -1.54 -0.188 fdrA b0518 involved in protein transport; multicopy suppressor of dominant negative ftsH mutants Putative transport proteins "transport; Protein, peptide secretion" b0519 1107 1269 -1.15 -0.059 574 529 1.09 0.035 1188 551 0.007009 0.003319 H10 2 2 2820 2.11 0.325 ylbE b0519 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0520 322 316 1.00 0.000 235 306 -1.00 0.000 319 270 0.001883 0.001628 J23 1 2 2397 1.00 0.000 ylbF b0520 putative carboxylase Putative enzymes putative enzyme; Not classified b0521 1765 1529 1.15 0.062 1267 1135 1.12 0.048 1647 1201 0.009717 0.007230 M2 3 2 2119 1.34 0.128 arcC b0521 putative carbamate kinase (EC 2.7.2.2) Putative enzymes putative enzyme; Not classified b0522 2497 2225 1.12 0.050 2565 2534 1.01 0.005 2361 2549 0.013932 0.015348 A20 1 2 1993 -1.10 -0.042 purK b0522 "phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit" Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b0523 1272 1147 1.11 0.045 1383 1107 1.25 0.097 1210 1245 0.007138 0.007494 C20 1 2 1994 -1.05 -0.021 purE b0523 "phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit" Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b0524 884 1123 -1.27 -0.104 894 1071 -1.20 -0.078 1003 982 0.005920 0.005914 J10 2 2 2821 1.00 0.000 ybbF b0524 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0525 5814 5296 1.10 0.041 4169 5226 -1.25 -0.098 5555 4697 0.032778 0.028281 M13 2 2 1687 1.16 0.064 ppiB b0525 peptidyl-prolyl cis-trans isomerase B (rotamase B) "Translation, post-translational modification" enzyme; Proteins - translation and modification b0526 5480 5305 1.03 0.014 3824 4000 -1.05 -0.020 5393 3912 0.031820 0.023550 O13 2 2 1688 1.35 0.131 cysS b0526 cysteine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0527 1963 2039 -1.04 -0.016 1309 1071 1.22 0.087 2001 1190 0.011807 0.007163 L10 2 2 2822 1.65 0.217 ybcI b0527 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0528 1055 1034 1.02 0.009 1313 1409 -1.07 -0.030 1044 1361 0.006163 0.008194 N10 2 2 2823 -1.33 -0.124 ybcJ b0528 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0529 2004 1936 1.04 0.015 2350 2406 -1.02 -0.010 1970 2378 0.011626 0.014315 E22 4 2 2291 -1.23 -0.090 folD b0529 "5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b0530 534 467 1.07 0.029 67 315 -1.00 0.000 501 191 0.002954 0.001150 L11 4 1 1102 1.00 0.000 sfmA b0530 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0531 27 99 -1.00 0.000 8 106 -1.00 0.000 63 57 0.000373 0.000343 N24 1 1 1247 1.00 0.000 sfmC b0531 putative chaperone Putative factors putative factor; Not classified b0532 2444 2555 -1.05 -0.019 1899 1650 1.15 0.061 2499 1775 0.014747 0.010685 A12 1 1 425 1.38 0.140 sfmD b0532 "putative outer membrane protein, export function" putative membrane protein putative membrane; Not classified b0533 950 765 1.24 0.094 374 544 -1.09 -0.037 857 459 0.005059 0.002764 N11 4 1 1103 1.69 0.227 sfmH b0533 involved in fimbrial asembly Cell processes phenotype; Not classified b0534 352 162 1.00 0.000 138 213 -1.00 0.000 257 176 0.001519 0.001059 P11 4 1 1104 1.00 0.000 sfmF b0534 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0535 106 -56 1.00 0.000 172 59 1.00 0.000 25 115 0.000148 0.000694 C12 1 1 426 -1.00 0.000 fimZ b0535 fimbrial Z protein; probable signal transducer Putative regulatory proteins putative regulator; Surface structures b0537 572 846 -1.48 -0.171 259 379 -1.00 0.000 709 319 0.004183 0.001920 E9 4 1 323 1.39 0.144 intD b0537 prophage DLP12 integrase "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b0538 863 732 1.18 0.071 443 465 -1.00 0.000 798 454 0.004706 0.002731 F2 2 3 193 1.57 0.196 b0538 b0538 putative sensory transduction regulator Putative regulatory proteins putative regulator; Not classified b0539 1760 1617 1.09 0.037 375 324 1.00 0.000 1688 349 0.009963 0.002104 G9 4 1 324 3.32 0.521 b0539 b0539 putative exonuclease (EC 3.1.11.3) similar to lambda Putative enzymes putative enzyme; Not classified b0540 1787 2343 -1.31 -0.118 1311 1254 1.05 0.019 2065 1282 0.012187 0.007720 P10 2 2 2824 1.58 0.198 b0540 b0540 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0541 1985 1879 1.06 0.024 567 643 -1.13 -0.055 1932 605 0.011398 0.003640 I9 4 1 325 3.13 0.496 tra5_2 b0541 IS3 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0542 230 253 -1.00 0.000 102 165 -1.00 0.000 242 133 0.001426 0.000803 B12 2 2 2825 1.00 0.000 b0542 b0542 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0543 629 546 1.15 0.061 194 289 -1.00 0.000 588 241 0.003468 0.001454 D12 2 2 2826 1.16 0.063 emrE b0543 methylviologen resistance Cell processes transport; Drug/analog sensitivity b0544 166 391 -1.00 0.000 391 396 -1.00 0.000 279 394 0.001645 0.002369 F12 2 2 2827 -1.00 0.000 ybcK b0544 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0545 53 168 -1.00 0.000 -77 -56 -1.00 0.000 111 -66 0.000652 -0.000400 H12 2 2 2828 1.00 0.000 ybcL b0545 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0546 -281 554 -1.11 -0.044 -163 429 -1.00 0.000 136 133 0.000804 0.000799 A15 2 2 1689 1.00 0.000 ybcM b0546 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b0547 10628 10653 -1.00 -0.001 16168 13980 1.16 0.063 10640 15074 0.062786 0.090756 J12 2 2 2829 -1.45 -0.160 ybcN b0547 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0548 16751 17260 -1.03 -0.013 17319 16891 1.03 0.011 17006 17105 0.100345 0.102982 L12 2 2 2830 -1.03 -0.011 ninE b0548 similar to phage 82 and lambda proteins "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b0549 19667 17244 1.14 0.057 14391 13874 1.04 0.016 18456 14133 0.108901 0.085087 N12 2 2 2831 1.28 0.107 ybcO b0549 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0550 818 731 1.12 0.049 518 533 -1.03 -0.013 775 525 0.004571 0.003164 P12 2 2 2832 1.44 0.160 rus b0550 endodeoxyribonuclease RUS (Holliday junction resolvase) "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b0551 57 251 -1.00 0.000 91 253 -1.00 0.000 154 172 0.000911 0.001036 B14 2 2 2833 -1.00 0.000 ybcQ b0551 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0552 4070 3961 1.03 0.012 4373 4464 -1.02 -0.009 4016 4419 0.023695 0.026604 K9 4 1 326 -1.12 -0.050 trs5_2 b0552 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0553 4476 5347 -1.19 -0.077 4366 4339 1.01 0.003 4911 4353 0.028980 0.026207 M9 4 1 327 1.11 0.044 nmpC b0553 outer membrane porin protein; locus of qsr prophage "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b0554 2880 4024 -1.40 -0.145 2173 2341 -1.08 -0.032 3452 2257 0.020371 0.013589 D14 2 2 2834 1.50 0.176 ybcR b0554 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0555 1054 996 1.06 0.025 787 848 -1.08 -0.033 1025 817 0.006048 0.004920 F14 2 2 2835 1.23 0.090 ybcS b0555 bacteriophage lambda lysozyme homolog "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b0556 238 252 -1.00 0.000 417 514 -1.03 -0.012 245 465 0.001445 0.002803 H14 2 2 2836 -1.00 0.000 ybcT b0556 bacteriophage lambda endopeptidase homolog "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b0557 451 582 -1.16 -0.066 1958 2116 -1.08 -0.034 517 2037 0.003049 0.012266 J14 2 2 2837 -4.02 -0.605 ybcU b0557 bacteriophage lambda Bor protein homolog "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b0558 626 511 1.23 0.088 334 200 1.00 0.000 568 267 0.003352 0.001608 E12 1 1 427 1.12 0.048 ybcV b0558 putative an envelop protein Putative cell structure putative structure; Not classified b0559 1671 2075 -1.24 -0.094 1985 2241 -1.13 -0.053 1873 2113 0.011051 0.012721 L14 2 2 2838 -1.15 -0.061 ybcW b0559 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0560 141 173 -1.00 0.000 178 171 1.00 0.000 157 175 0.000927 0.001052 O9 4 1 328 -1.00 0.000 nohB b0560 bacteriophage DNA packaging protein "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b0561 1074 889 1.21 0.082 785 717 1.10 0.040 981 751 0.005791 0.004522 N14 2 2 2839 1.28 0.107 ybcX b0561 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0562 721 963 -1.34 -0.126 741 737 1.01 0.003 842 739 0.004968 0.004451 P14 2 2 2840 1.12 0.048 ybcY b0562 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0563 -17 400 -1.00 0.000 -90 100 -1.00 0.000 191 5 0.001130 0.000030 B16 2 2 2841 1.00 0.000 ylcE b0563 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0564 2190 2593 -1.18 -0.073 1169 1061 1.10 0.042 2391 1115 0.014111 0.006711 O2 3 2 2120 2.10 0.323 appY b0564 regulatory protein affecting appA and other genes Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b0565 23840 18568 1.28 0.109 11586 10995 1.05 0.023 21204 11290 0.125117 0.067975 G12 1 1 428 1.84 0.265 ompT b0565 "outer membrane protein 3b (a), protease VII" Cell structure enzyme; Outer membrane constituents b0566 1688 1363 1.24 0.093 499 441 1.00 0.000 1526 470 0.009003 0.002829 I12 1 1 429 3.00 0.477 envY b0566 envelope protein; thermoregulation of porin biosynthesis Cell processes structural component; Outer membrane constituents b0567 3884 3474 1.12 0.048 2423 2463 -1.02 -0.007 3679 2443 0.021709 0.014709 D16 2 2 2842 1.48 0.169 ybcH b0567 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0568 3697 3505 1.05 0.023 3911 3920 -1.00 -0.001 3601 3915 0.021249 0.023573 A11 4 1 329 -1.11 -0.045 nfrA b0568 "bacteriophage N4 receptor, outer membrane protein" "Phage, transposon, or plasmid" membrane; Phage-related functions and prophages b0569 2497 1706 1.46 0.165 3398 2836 1.20 0.079 2102 3117 0.012402 0.018766 C11 4 1 330 -1.51 -0.180 nfrB b0569 "bacteriophage N4 receptor, outer membrane protein" "Phage, transposon, or plasmid" membrane; Phage-related functions and prophages b0570 861 983 -1.14 -0.058 706 784 -1.11 -0.046 922 745 0.005440 0.004486 C1 3 1 194 1.21 0.084 ybcZ b0570 putative 2-component sensor protein Putative regulatory proteins putative regulator; Not classified b0571 3508 3427 1.02 0.010 2095 2254 -1.08 -0.032 3468 2174 0.020461 0.013090 E1 3 1 195 1.56 0.194 ylcA b0571 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b0572 68 605 -1.21 -0.083 -102 489 -1.00 0.000 337 194 0.001986 0.001166 D17 2 1 930 1.00 0.000 ylcB b0572 putative resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b0573 494 378 1.00 0.000 132 338 -1.00 0.000 436 235 0.002573 0.001414 F16 2 2 2843 1.00 0.000 ylcC b0573 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0574 1498 2051 -1.37 -0.136 1479 1791 -1.21 -0.083 1775 1635 0.010473 0.009844 F17 2 1 931 1.06 0.027 ylcD b0574 putative resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b0575 4278 4610 -1.08 -0.032 4408 4960 -1.13 -0.051 4444 4684 0.026222 0.028199 H17 2 1 932 -1.08 -0.032 ybdE b0575 putative inner membrane component for iron transport Putative transport proteins putative transport; Not classified b0576 419 -157 1.00 0.000 657 339 1.31 0.119 131 498 0.000773 0.003000 A22 3 1 657 -1.00 0.000 pheP b0576 phenylalanine-specific transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0577 4033 5977 -1.48 -0.171 3562 4769 -1.34 -0.127 5005 4165 0.029533 0.025079 J17 2 1 933 1.18 0.071 ybdG b0577 putative transport Putative transport proteins putative transport; Not classified b0578 895 786 1.14 0.056 829 1162 -1.40 -0.147 841 996 0.004961 0.005994 B13 4 1 1105 -1.21 -0.082 nfnB b0578 oxygen-insensitive NAD(P)H nitroreductase Cell processes enzyme; Drug/analog sensitivity b0579 1910 1898 1.01 0.003 1234 1199 1.03 0.013 1904 1216 0.011234 0.007323 H16 2 2 2844 1.53 0.186 ybdF b0579 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0580 535 637 -1.19 -0.076 618 601 1.03 0.012 586 610 0.003460 0.003670 J16 2 2 2845 -1.06 -0.026 ybdJ b0580 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0581 2315 2318 -1.00 -0.001 1308 1416 -1.08 -0.034 2316 1362 0.013668 0.008200 L16 2 2 2846 1.67 0.222 ybdK b0581 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0582 2170 2024 1.07 0.030 2382 2624 -1.10 -0.042 2097 2503 0.012375 0.015070 E11 4 1 331 -1.22 -0.086 yi81_2 b0582 IS186 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0583 1900 1633 1.16 0.066 1279 1284 -1.00 -0.002 1766 1281 0.010423 0.007714 G22 4 2 2292 1.35 0.131 entD b0583 "enterochelin synthetase, component D" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Enterochelin" b0584 8307 8820 -1.06 -0.026 238 326 -1.00 0.000 8564 282 0.050533 0.001701 C22 3 1 658 16.84 1.226 fepA b0584 outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D Transport and binding proteins membrane; Transport of small molecules: Cations b0585 2826 3219 -1.14 -0.057 1251 1213 1.03 0.013 3023 1232 0.017835 0.007417 E22 3 1 659 2.40 0.381 fes b0585 enterochelin esterase Transport and binding proteins enzyme; Transport of small molecules: Cations b0586 1114 1810 -1.62 -0.211 100 192 -1.00 0.000 1462 146 0.008626 0.000878 I22 4 2 2293 2.88 0.459 entF b0586 ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F) "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Enterochelin" b0587 1454 1397 1.04 0.017 1388 1269 1.09 0.039 1425 1329 0.008411 0.008000 G22 3 1 660 1.05 0.022 fepE b0587 ferric enterobactin (enterochelin) transport Transport and binding proteins transport; Transport of small molecules: Cations b0588 804 869 -1.08 -0.033 428 384 1.00 0.000 836 406 0.004936 0.002446 I22 3 1 661 1.65 0.216 fepC b0588 ATP-binding component of ferric enterobactin transport Transport and binding proteins transport; Transport of small molecules: Cations b0589 608 521 1.17 0.067 202 261 -1.00 0.000 564 231 0.003330 0.001393 K22 3 1 662 1.11 0.045 fepG b0589 ferric enterobactin transport protein Transport and binding proteins transport; Transport of small molecules: Cations b0590 2614 2318 1.13 0.052 1567 1411 1.11 0.046 2466 1489 0.014553 0.008964 M22 3 1 663 1.62 0.210 fepD b0590 ferric enterobactin (enterochelin) transport Transport and binding proteins transport; Transport of small molecules: Cations b0591 2787 2892 -1.04 -0.016 1176 1598 -1.36 -0.133 2839 1387 0.016754 0.008351 L17 2 1 934 2.01 0.302 ybdA b0591 putative transport Putative transport proteins putative transport; Not classified b0592 1008 848 1.19 0.075 380 386 -1.00 0.000 928 383 0.005477 0.002306 O22 3 1 664 1.83 0.261 fepB b0592 ferric enterobactin (enterochelin) binding protein; periplasmic component Transport and binding proteins transport; Transport of small molecules: Cations b0593 3259 4108 -1.26 -0.100 1241 1452 -1.17 -0.068 3683 1346 0.021735 0.008105 K22 4 2 2294 2.68 0.428 entC b0593 "isochorismate hydroxymutase 2, enterochelin biosynthesis" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Enterochelin" b0594 3915 3426 1.14 0.058 1033 1026 1.01 0.003 3670 1030 0.021658 0.006198 M22 4 2 2295 3.49 0.543 entE b0594 "2,3-dihydroxybenzoate-AMP ligase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Enterochelin" b0595 3239 3639 -1.12 -0.051 1215 1171 1.04 0.016 3439 1193 0.020292 0.007184 O22 4 2 2296 2.82 0.451 entB b0595 "2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Enterochelin" b0596 9584 9309 1.03 0.013 7696 7600 1.01 0.005 9447 7648 0.055742 0.046044 P6 2 3 2297 1.21 0.083 entA b0596 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Enterochelin" b0597 3753 5120 -1.36 -0.135 1737 2225 -1.28 -0.107 4437 1981 0.026179 0.011927 N16 2 2 2847 2.19 0.341 ybdB b0597 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0598 17066 16561 1.03 0.013 10763 12636 -1.17 -0.070 16814 11699 0.099212 0.070436 P16 2 2 2848 1.41 0.149 cstA b0598 carbon starvation protein Cell processes phenotype; Global regulatory functions b0599 2084 1908 1.09 0.038 1654 1655 -1.00 0.000 1996 1655 0.011778 0.009962 A4 3 2 2121 1.18 0.073 ybdH b0599 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0600 1668 1811 -1.09 -0.036 1621 1426 1.14 0.056 1739 1524 0.010264 0.009173 C4 3 2 2122 1.12 0.049 ybdL b0600 putative aminotransferase Putative enzymes putative enzyme; Not classified b0601 3604 5145 -1.43 -0.155 8973 8923 1.01 0.002 4375 8948 0.025813 0.053874 B18 2 2 2849 -2.09 -0.320 ybdM b0601 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0602 685 815 -1.19 -0.076 1039 1375 -1.32 -0.122 750 1207 0.004425 0.007264 D18 2 2 2850 -1.64 -0.215 ybdN b0602 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0603 80 -153 1.00 0.000 23 13 1.00 0.000 -37 18 -0.000216 0.000111 G1 3 1 196 -1.00 0.000 ybdO b0603 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0604 385 453 -1.00 0.000 303 371 -1.00 0.000 419 337 0.002472 0.002031 L8 2 1 1278 1.00 0.000 dsbG b0604 thiol:disulfide interchange protein Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0605 12564 12114 1.04 0.016 8192 7942 1.03 0.013 12339 8067 0.072810 0.048568 D13 4 1 1106 1.50 0.176 ahpC b0605 "alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides" Cell processes enzyme; Detoxification b0606 1786 1736 1.03 0.012 2067 2132 -1.03 -0.013 1761 2099 0.010393 0.012638 F13 4 1 1107 -1.22 -0.085 ahpF b0606 "alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides" Cell processes enzyme; Detoxification b0607 2205 2100 1.05 0.021 2906 2841 1.02 0.010 2153 2874 0.012701 0.017302 F18 2 2 2851 -1.36 -0.134 ybdQ b0607 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0608 21368 27903 -1.31 -0.116 14085 14105 -1.00 -0.001 24636 14095 0.145368 0.084859 E4 3 2 2123 1.71 0.234 ybdR b0608 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0609 290 256 1.00 0.000 306 366 -1.00 0.000 273 336 0.001611 0.002023 H18 2 2 2852 -1.00 0.000 b0609 b0609 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0610 2174 1274 1.71 0.232 2831 2384 1.19 0.075 1724 2608 0.010174 0.015700 G4 3 2 2124 -1.54 -0.188 rnk b0610 regulator of nucleoside diphosphate kinase Regulatory function regulator; Central intermediary metabolism: Nucleotide interconversions b0611 511 547 -1.07 -0.030 244 268 -1.00 0.000 529 256 0.003121 0.001540 P18 4 1 1512 1.04 0.017 rna b0611 "RNase I, cleaves phosphodiester bond between any two nucleotides" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b0612 945 1042 -1.10 -0.042 365 474 -1.00 0.000 994 419 0.005864 0.002524 K12 1 1 430 1.95 0.291 ybdS b0612 putative a membrane protein putative membrane protein putative membrane; Not classified b0613 582 684 -1.17 -0.070 663 846 -1.28 -0.106 633 755 0.003733 0.004544 J18 2 2 2853 -1.22 -0.085 citG b0613 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0614 649 1072 -1.65 -0.218 696 1028 -1.48 -0.169 861 862 0.005078 0.005188 L18 2 2 2854 -1.02 -0.009 ybdU b0614 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0615 570 722 -1.27 -0.103 411 523 -1.05 -0.019 646 467 0.003811 0.002813 L23 1 2 2398 1.27 0.104 citF b0615 citrate lyase alpha chain Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0616 1243 1083 1.15 0.060 853 857 -1.00 -0.002 1163 855 0.006860 0.005148 N23 1 2 2399 1.33 0.125 citE b0616 citrate lyase beta chain (acyl lyase subunit) Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0617 3511 3867 -1.10 -0.042 2093 2181 -1.04 -0.018 3689 2137 0.021766 0.012865 N8 2 1 1279 1.69 0.228 citD b0617 citrate lyase acyl carrier protein (gamma chain) Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0618 529 616 -1.17 -0.066 376 429 -1.00 0.000 572 403 0.003377 0.002424 P23 1 2 2400 1.13 0.051 citC b0618 citrate lyase synthetase (citrate (pro-3S)-lyase ligase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0619 815 498 1.63 0.212 232 251 -1.00 0.000 657 242 0.003875 0.001454 I1 3 1 197 1.29 0.111 citA b0619 putative sensor-type protein Putative regulatory proteins putative regulator; Not classified b0620 242 206 1.00 0.000 127 39 1.00 0.000 224 83 0.001323 0.000502 K1 3 1 198 1.00 0.000 citB b0620 sequence similarity to Shigella regulator Putative regulatory proteins putative regulator; Not classified b0621 5954 4712 1.26 0.102 3902 4635 -1.19 -0.075 5333 4269 0.031469 0.025701 N18 2 2 2855 1.22 0.088 dcuC b0621 transport of dicarboxylates Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b0622 3625 3104 1.17 0.067 3336 3414 -1.02 -0.010 3365 3375 0.019853 0.020318 P18 2 2 2856 -1.02 -0.010 crcA b0622 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0623 5377 5236 1.03 0.012 5449 6855 -1.26 -0.100 5307 6152 0.031312 0.037036 B11 4 2 2633 -1.18 -0.073 cspE b0623 cold shock protein Cell processes phenotype; Not classified b0624 1137 1312 -1.15 -0.062 2128 2573 -1.21 -0.083 1224 2350 0.007224 0.014150 B20 2 2 2857 -1.96 -0.292 crcB b0624 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0625 1738 2539 -1.46 -0.164 1633 2031 -1.24 -0.095 2139 1832 0.012619 0.011028 D20 2 2 2858 1.14 0.059 ybeH b0625 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0626 420 343 1.00 0.000 255 279 -1.00 0.000 381 267 0.002251 0.001609 B1 2 2 2401 1.00 0.000 ybeM b0626 putative amidase Putative enzymes putative enzyme; Not classified b0627 1379 1554 -1.13 -0.052 1274 1484 -1.16 -0.066 1466 1379 0.008653 0.008303 F20 2 2 2859 1.04 0.018 ybeC b0627 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0628 3116 3843 -1.23 -0.091 3553 3510 1.01 0.005 3479 3531 0.020530 0.021261 C24 4 2 2298 -1.04 -0.015 lipA b0628 "lipoate synthesis, sulfur insertion?" "Biosynthesis of cofactors, prosthetic groups and carriers" "putative enzyme; Biosynthesis of cofactors, carriers: Lipoate" b0629 205 250 -1.00 0.000 39 115 -1.00 0.000 227 77 0.001340 0.000461 H20 2 2 2860 1.00 0.000 ybeF b0629 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0630 3149 2960 1.06 0.027 2445 2612 -1.07 -0.029 3054 2529 0.018022 0.015224 E24 4 2 2299 1.18 0.073 lipB b0630 protein of lipoate biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Lipoate" b0631 588 561 1.05 0.020 672 649 1.04 0.015 575 661 0.003391 0.003977 J20 2 2 2861 -1.17 -0.069 ybeD b0631 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0632 9960 9902 1.01 0.003 4701 5179 -1.10 -0.042 9931 4940 0.058601 0.029743 M12 1 1 431 1.97 0.295 dacA b0632 "D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5" Cell structure "enzyme; Murein sacculus, peptidoglycan" b0633 1394 1369 1.02 0.008 1004 1056 -1.05 -0.022 1382 1030 0.008152 0.006201 E2 3 1 579 1.31 0.119 rlpA b0633 a minor lipoprotein Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b0634 4638 3206 1.45 0.160 2237 2690 -1.20 -0.080 3922 2463 0.023144 0.014831 O12 1 1 432 1.56 0.193 mrdB b0634 rod shape-determining membrane protein; sensitivity to radiation and drugs Cell processes phenotype; Cell division b0635 5868 6184 -1.05 -0.023 5865 5821 1.01 0.003 6026 5843 0.035555 0.035177 A14 1 1 433 1.01 0.005 mrdA b0635 "cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2" Cell processes enzyme; Cell division b0636 109 306 -1.00 0.000 661 861 -1.30 -0.115 208 761 0.001224 0.004582 L20 2 2 2862 -1.53 -0.184 ybeA b0636 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0637 218 637 -1.27 -0.105 700 703 -1.00 -0.002 427 702 0.002521 0.004224 N20 2 2 2863 -1.41 -0.149 ybeB b0637 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0638 3248 2993 1.09 0.035 3211 2779 1.16 0.063 3120 2995 0.018413 0.018029 G24 4 2 2300 1.02 0.009 phpB b0638 "homolog of Salmonella cobC, a phosphohistidine protein" Putative regulatory proteins "putative regulator; Biosynthesis of cofactors, carriers: Cobalamin" b0639 510 825 -1.62 -0.209 4271 5097 -1.19 -0.077 668 4684 0.003940 0.028202 P20 2 2 2864 -7.16 -0.855 ybeN b0639 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0640 54934 54628 1.01 0.002 59088 61027 -1.03 -0.014 54781 60057 0.323248 0.361579 B20 4 1 1513 -1.12 -0.049 holA b0640 "DNA polymerase III, delta subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0641 1748 1430 1.22 0.087 1861 2039 -1.10 -0.040 1589 1950 0.009376 0.011742 C14 1 1 434 -1.25 -0.098 rlpB b0641 a minor lipoprotein Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b0642 2227 3056 -1.37 -0.137 1435 3348 -2.33 -0.368 2642 2392 0.015588 0.014400 C15 2 2 1690 1.08 0.034 leuS b0642 leucine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0643 3322 2026 1.64 0.215 1135 1277 -1.13 -0.051 2674 1206 0.015777 0.007260 G6 3 1 596 2.17 0.337 ybeL b0643 putative alpha helical protein "Hypothetical, unclassified, unknown" phenotype; Not classified b0644 302 215 1.00 0.000 321 390 -1.00 0.000 259 355 0.001527 0.002140 B22 2 2 2865 -1.00 0.000 ybeQ b0644 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0645 522 562 -1.08 -0.032 717 912 -1.27 -0.104 542 815 0.003198 0.004904 D22 2 2 2866 -1.53 -0.186 ybeR b0645 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0646 1205 1317 -1.09 -0.039 668 861 -1.29 -0.110 1261 765 0.007441 0.004605 D1 2 2 2402 1.62 0.208 ybeS b0646 putative enzyme of polynucleotide modification Putative enzymes putative enzyme; Not classified b0647 2585 2728 -1.06 -0.023 1962 2002 -1.02 -0.009 2657 1982 0.015677 0.011932 F22 2 2 2867 1.31 0.119 ybeT b0647 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0648 338 1962 -3.92 -0.594 1299 1420 -1.09 -0.039 1150 1359 0.006787 0.008185 E15 2 2 1691 -1.21 -0.081 ybeU b0648 putative tRNA ligase Putative enzymes putative enzyme; Not classified b0649 3972 3381 1.17 0.070 3786 4114 -1.09 -0.036 3677 3950 0.021695 0.023781 H22 2 2 2868 -1.10 -0.040 ybeV b0649 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0650 715 641 1.12 0.048 940 812 1.16 0.064 678 876 0.004002 0.005273 D20 4 1 1514 -1.32 -0.120 ybeW b0650 putative dnaK protein Putative enzymes putative enzyme; Not classified b0651 499 624 -1.25 -0.097 504 662 -1.31 -0.119 562 583 0.003315 0.003509 G15 2 2 1692 -1.06 -0.025 ybeK b0651 putative tRNA synthetase "Hypothetical, unclassified, unknown" orf; Not classified b0652 923 706 1.31 0.117 849 892 -1.05 -0.021 814 871 0.004805 0.005242 N2 2 3 665 -1.09 -0.038 gltL b0652 ATP-binding protein of glutamate/aspartate transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0653 180 124 1.00 0.000 384 177 1.00 0.000 152 281 0.000897 0.001690 C24 3 1 666 -1.00 0.000 gltK b0653 glutamate/aspartate transport system permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0654 29452 29751 -1.01 -0.004 28791 26466 1.09 0.037 29602 27628 0.174670 0.166338 E24 3 1 667 1.05 0.021 gltJ b0654 glutamate/aspartate transport system permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0655 5993 6593 -1.10 -0.041 2547 3245 -1.27 -0.105 6293 2896 0.037133 0.017436 N17 2 1 935 2.13 0.328 ybeJ b0655 putative periplasmic binding transport protein Putative transport proteins putative transport; Not classified b0656 4608 4397 1.05 0.020 6769 7270 -1.07 -0.031 4502 7020 0.026567 0.042263 G11 4 1 332 -1.59 -0.202 trs5_3 b0656 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0657 744 451 1.49 0.172 797 554 1.44 0.158 597 676 0.003525 0.004067 G24 3 1 668 -1.15 -0.062 lnt b0657 "apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane" Transport and binding proteins enzyme; Transport of small molecules: Cations b0658 598 1687 -2.82 -0.451 1121 1007 1.11 0.046 1143 1064 0.006742 0.006408 F1 2 2 2403 1.05 0.022 ybeX b0658 putative transport protein Putative transport proteins putative transport; Not classified b0659 828 701 1.18 0.072 522 652 -1.25 -0.097 764 587 0.004510 0.003534 J22 2 2 2869 1.28 0.106 ybeY b0659 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0660 30032 32548 -1.08 -0.035 11895 13559 -1.14 -0.057 31290 12727 0.184633 0.076624 P17 2 1 936 2.41 0.382 ybeZ b0660 putative ATP-binding protein in pho regulon Putative transport proteins putative transport; Not classified b0661 2006 2561 -1.28 -0.106 3333 3325 1.00 0.001 2283 3329 0.013473 0.020044 L22 2 2 2870 -1.49 -0.173 yleA b0661 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0662 371 343 1.00 0.000 479 499 -1.00 0.000 357 489 0.002106 0.002941 N22 2 2 2871 -1.00 0.000 yleB b0662 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0663 2487 2155 1.15 0.062 15819 15215 1.04 0.017 2321 15517 0.013694 0.093421 P22 2 2 2872 -6.82 -0.834 b0663 b0663 putative RNA "Hypothetical, unclassified, unknown" putative RNA; Not classified b0667 1458 1362 1.07 0.030 5480 5783 -1.06 -0.023 1410 5632 0.008321 0.033905 B24 2 2 2873 -4.07 -0.610 b0667 b0667 putative RNA "Hypothetical, unclassified, unknown" putative RNA; Not classified b0669 1722 2401 -1.39 -0.144 8105 8006 1.01 0.005 2062 8056 0.012166 0.048500 D24 2 2 2874 -3.99 -0.601 b0669 b0669 putative RNA "Hypothetical, unclassified, unknown" putative RNA; Not classified b0671 1113 1224 -1.10 -0.041 4276 4321 -1.01 -0.005 1169 4298 0.006895 0.025878 F24 2 2 2875 -3.75 -0.574 b0671 b0671 putative RNA "Hypothetical, unclassified, unknown" putative RNA; Not classified b0674 1521 1690 -1.11 -0.046 1772 1314 1.35 0.130 1606 1543 0.009475 0.009291 A13 4 2 1873 1.02 0.009 asnB b0674 asparagine synthetase B Amino acid biosynthesis enzyme; Amino acid biosynthesis: Asparagine b0675 700 767 -1.10 -0.040 1652 1786 -1.08 -0.034 734 1719 0.004329 0.010350 I4 3 2 2125 -2.39 -0.379 nagD b0675 N-acetylglucosamine metabolism Carbon compound catabolism enzyme; Central intermediary metabolism: Amino sugars b0676 1747 1327 1.32 0.119 1145 1112 1.03 0.013 1537 1128 0.009070 0.006792 K4 3 2 2126 1.34 0.126 nagC b0676 transcriptional repressor of nag (N-acetylglucosamine) operon Regulatory function regulator; Central intermediary metabolism: Amino sugars b0677 1728 1446 1.20 0.077 1582 923 1.71 0.234 1587 1253 0.009365 0.007541 M4 3 2 2127 1.24 0.094 nagA b0677 N-acetylglucosamine-6-phosphate deacetylase Carbon compound catabolism enzyme; Central intermediary metabolism: Amino sugars b0678 706 351 1.41 0.150 647 711 -1.10 -0.041 528 679 0.003116 0.004087 O4 3 2 2128 -1.31 -0.118 nagB b0678 glucosamine-6-phosphate deaminase Carbon compound catabolism enzyme; Central intermediary metabolism: Amino sugars b0679 7158 5650 1.27 0.103 10376 9559 1.09 0.036 6404 9968 0.037787 0.060011 I24 3 1 669 -1.59 -0.201 nagE b0679 "PTS system, N-acetylglucosamine-specific enzyme IIABC" Transport and binding proteins "enzyme; Transport of small molecules: Amino acids, amines" b0680 63375 73559 -1.16 -0.065 31874 31285 1.02 0.008 68467 31580 0.404002 0.190128 I15 2 2 1693 2.12 0.327 glnS b0680 glutamine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0681 569 1230 -2.16 -0.335 1098 1076 1.02 0.009 900 1087 0.005308 0.006544 H24 2 2 2876 -1.23 -0.091 ybfM b0681 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0682 0 562 -1.12 -0.051 498 591 -1.18 -0.073 281 544 0.001658 0.003278 J24 2 2 2877 -1.09 -0.038 ybfN b0682 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0683 3326 3168 1.05 0.021 1606 1811 -1.13 -0.052 3247 1708 0.019162 0.010286 K9 2 1 134 1.86 0.270 fur b0683 negative regulator Regulatory function regulator; Global regulatory functions b0684 1021 1513 -1.48 -0.171 1115 1602 -1.44 -0.157 1267 1359 0.007475 0.008181 P8 2 1 1280 -1.09 -0.039 fldA b0684 flavodoxin 1 Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b0685 408 397 1.00 0.000 659 704 -1.07 -0.029 402 681 0.002373 0.004103 L24 2 2 2878 -1.37 -0.136 ybfE b0685 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0686 420 606 -1.21 -0.084 502 466 1.00 0.002 513 484 0.003027 0.002915 N24 2 2 2879 1.01 0.004 ybfF b0686 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0687 1710 1748 -1.02 -0.010 2454 2320 1.06 0.024 1729 2387 0.010201 0.014370 F20 4 1 1515 -1.41 -0.149 seqA b0687 negative modulator of initiation of replication Regulatory function "regulator; DNA - replication, repair, restriction/modification" b0688 3123 2634 1.19 0.074 2799 2750 1.02 0.008 2879 2775 0.016987 0.016704 E5 1 1 19 1.02 0.007 pgm b0688 phosphoglucomutase Central intermediary metabolism enzyme; Degradation of small molecules: Glycolysis b0689 1829 1312 1.39 0.144 1438 1276 1.13 0.052 1570 1357 0.009267 0.008170 A6 3 2 2129 1.13 0.055 ybfP b0689 putative pectinase Putative enzymes putative enzyme; Not classified b0690 235 104 1.00 0.000 138 82 1.00 0.000 170 110 0.001000 0.000660 L8 2 3 2880 1.00 0.000 ybfG b0690 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0691 181 383 -1.00 0.000 54 69 -1.00 0.000 282 62 0.001662 0.000371 B2 3 2 2881 1.00 0.000 ybfH b0691 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0692 221 91 1.00 0.000 226 142 1.00 0.000 156 184 0.000919 0.001109 K24 3 1 670 -1.00 0.000 potE b0692 putrescine transport protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0693 1080 957 1.13 0.053 1090 944 1.15 0.062 1018 1017 0.006009 0.006122 C6 3 2 2130 -1.02 -0.008 speF b0693 "ornithine decarboxylase isozyme, inducible" Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b0694 -33 93 -1.00 0.000 -62 122 -1.00 0.000 30 30 0.000178 0.000182 M9 2 1 135 -1.00 0.000 kdpE b0694 regulator of kdp operon (transcriptional effector) Regulatory function regulator; Global regulatory functions b0695 1488 1663 -1.12 -0.048 916 1246 -1.36 -0.134 1576 1081 0.009298 0.006507 O9 2 1 136 1.43 0.155 kdpD b0695 sensor for high-affinity potassium transport system Regulatory function enzyme; Global regulatory functions b0696 559 546 1.02 0.010 501 481 1.00 0.001 553 491 0.003261 0.002954 M24 3 1 671 1.09 0.036 kdpC b0696 high-affinity potassium transport system Transport and binding proteins enzyme; Transport of small molecules: Cations b0697 246 83 1.00 0.000 525 380 1.05 0.022 165 453 0.000972 0.002725 O24 3 1 672 -1.00 0.000 kdpB b0697 "ATPase of high-affinity potassium transport system, B chain" Transport and binding proteins enzyme; Transport of small molecules: Cations b0698 16711 15560 1.07 0.031 11953 10658 1.12 0.050 16136 11305 0.095211 0.068065 A2 4 1 673 1.40 0.146 kdpA b0698 "ATPase of high-affinity potassium transport system, A chain" Transport and binding proteins enzyme; Transport of small molecules: Cations b0699 1462 551 2.65 0.424 316 260 1.00 0.000 1006 288 0.005938 0.001734 D2 3 2 2882 1.98 0.297 ybfA b0699 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0700 -121 -128 1.00 0.000 38 -113 1.00 0.000 -124 -38 -0.000734 -0.000227 F2 3 2 2883 -1.00 0.000 rhsC b0700 "rhsC protein in rhs element, interrupted" "Hypothetical, unclassified, unknown" orf; Transposon-related functions b0701 324 266 1.00 0.000 526 432 1.05 0.022 295 479 0.001740 0.002883 N16 1 3 4287 -1.00 0.000 b0701 b0701 rhsC protein in rhs element "Hypothetical, unclassified, unknown" orf; Transposon-related functions b0702 77 -331 1.00 0.000 -34 -60 1.00 0.000 -127 -47 -0.000750 -0.000283 H2 3 2 2884 -1.00 0.000 ybfB b0702 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0703 736 342 1.47 0.168 763 343 1.53 0.183 539 553 0.003180 0.003330 J2 3 2 2885 -1.05 -0.020 b0703 b0703 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0704 133 137 -1.00 0.000 197 -74 1.00 0.000 135 61 0.000796 0.000370 L2 3 2 2886 1.00 0.000 ybfC b0704 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0705 93 37 1.00 0.000 -17 56 -1.00 0.000 65 19 0.000382 0.000117 M1 3 1 199 1.00 0.000 ybfL b0705 putative receptor protein Putative factors putative factor; Not classified b0706 7294 7679 -1.05 -0.022 3941 3876 1.02 0.007 7487 3909 0.044177 0.023534 H20 4 1 1516 1.88 0.274 ybfD b0706 putative DNA ligase Putative enzymes putative enzyme; Not classified b0707 522 261 1.04 0.019 250 196 1.00 0.000 391 223 0.002308 0.001344 N2 3 2 2887 1.00 0.000 ybgA b0707 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0708 60604 59595 1.02 0.007 37139 36809 1.01 0.004 60100 36974 0.354630 0.222602 J20 4 1 1517 1.59 0.202 phrB b0708 deoxyribodipyrimidine photolyase (photoreactivation) "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0709 1123 1198 -1.07 -0.028 527 577 -1.09 -0.039 1160 552 0.006846 0.003325 C2 4 1 674 2.06 0.314 ybgH b0709 putative transport protein Putative transport proteins putative transport; Not classified b0710 1678 1289 1.30 0.114 664 435 1.33 0.123 1484 550 0.008756 0.003309 P2 3 2 2888 2.65 0.423 ybgI b0710 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0711 18432 18016 1.02 0.010 12229 13084 -1.07 -0.029 18224 12656 0.107533 0.076199 E6 3 2 2131 1.41 0.150 ybgJ b0711 putative carboxylase Putative enzymes putative enzyme; Not classified b0712 3900 2518 1.55 0.190 2082 2007 1.04 0.016 3209 2045 0.018936 0.012309 G6 3 2 2132 1.54 0.187 ybgK b0712 putative carboxylase Putative enzymes putative enzyme; Not classified b0713 3313 2701 1.23 0.089 2475 2399 1.03 0.014 3007 2437 0.017744 0.014670 G5 1 1 20 1.21 0.083 ybgL b0713 putative lactam utilization protein "Hypothetical, unclassified, unknown" phenotype; Not classified b0714 1841 1922 -1.04 -0.019 2293 2738 -1.19 -0.077 1882 2516 0.011103 0.015146 L20 4 1 1518 -1.36 -0.135 nei b0714 endonuclease VIII and DNA N-glycosylase with an AP lyase activity "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0715 3781 4046 -1.07 -0.029 4122 4064 1.01 0.006 3914 4093 0.023094 0.024643 B19 2 1 937 -1.07 -0.028 abrB b0715 putative transport protein Putative transport proteins putative transport; Not classified b0716 293 -111 1.00 0.000 175 95 1.00 0.000 91 135 0.000535 0.000812 B4 3 2 2889 -1.00 0.000 ybgO b0716 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0717 2757 2563 1.08 0.032 1541 1274 1.21 0.083 2660 1408 0.015698 0.008477 J4 2 3 1248 1.85 0.268 ybgP b0717 putative chaperone Putative factors putative factor; Not classified b0718 2055 2790 -1.36 -0.133 1931 1803 1.07 0.030 2423 1867 0.014295 0.011241 I6 3 2 2133 1.27 0.104 ybgQ b0718 putative outer membrane protein putative membrane protein putative membrane; Not classified b0719 56 228 -1.00 0.000 50 219 -1.00 0.000 142 134 0.000839 0.000809 H13 4 1 1108 1.00 0.000 ybgD b0719 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0720 11247 10431 1.08 0.033 1689 2124 -1.26 -0.099 10839 1906 0.063959 0.011477 B10 2 1 1281 5.57 0.746 gltA b0720 citrate synthase Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0721 3708 3858 -1.04 -0.017 4659 5409 -1.16 -0.065 3783 5034 0.022321 0.030309 D10 2 1 1282 -1.36 -0.133 sdhC b0721 "succinate dehydrogenase, cytochrome b556" Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0722 1528 1509 1.01 0.005 2073 2468 -1.19 -0.076 1519 2270 0.008961 0.013668 F10 2 1 1283 -1.53 -0.183 sdhD b0722 "succinate dehydrogenase, hydrophobic subunit" Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0723 1438 1583 -1.10 -0.042 1800 1955 -1.09 -0.036 1511 1878 0.008913 0.011305 H10 2 1 1284 -1.27 -0.103 sdhA b0723 "succinate dehydrogenase, flavoprotein subunit" Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0724 490 991 -1.98 -0.297 278 1160 -2.32 -0.366 740 719 0.004368 0.004330 J10 2 1 1285 1.01 0.004 sdhB b0724 "succinate dehydrogenase, iron sulfur protein" Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0725 1378 1011 1.36 0.134 1190 1019 1.17 0.068 1195 1105 0.007049 0.006650 D4 3 2 2890 1.06 0.025 b0725 b0725 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0726 2270 2709 -1.19 -0.077 1619 1900 -1.17 -0.070 2489 1760 0.014689 0.010593 L10 2 1 1286 1.39 0.142 sucA b0726 2-oxoglutarate dehydrogenase (decarboxylase component) Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0727 1659 1337 1.24 0.094 898 1274 -1.42 -0.152 1498 1086 0.008840 0.006539 N10 2 1 1287 1.35 0.131 sucB b0727 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0728 26587 37611 -1.41 -0.151 12970 14226 -1.10 -0.040 32099 13598 0.189405 0.081867 P10 2 1 1288 2.31 0.364 sucC b0728 "succinyl-CoA synthetase, beta subunit" Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0729 1258 1939 -1.54 -0.188 965 1678 -1.74 -0.240 1598 1321 0.009432 0.007955 B12 2 1 1289 1.19 0.074 sucD b0729 "succinyl-CoA synthetase, alpha subunit" Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b0730 330 1060 -2.12 -0.326 638 1977 -3.10 -0.491 695 1308 0.004099 0.007872 D12 2 1 1290 -1.92 -0.283 farR b0730 transcriptional regulator of succinylCoA synthetase operon Regulatory function "regulator; Energy metabolism, carbon: TCA cycle" b0731 703 1906 -2.71 -0.433 2028 2004 1.01 0.005 1305 2016 0.007698 0.012137 K15 2 2 1694 -1.58 -0.198 hrsA b0731 "protein modification enzyme, induction of ompC" "Translation, post-translational modification" enzyme; Proteins - translation and modification b0732 1914 1899 1.01 0.003 2048 1671 1.23 0.088 1906 1859 0.011248 0.011194 I5 1 1 21 1.00 0.002 ybgG b0732 putative sugar hydrolase Putative enzymes putative enzyme; Not classified b0733 2126 2067 1.03 0.012 1706 2594 -1.52 -0.182 2096 2150 0.012369 0.012944 F12 2 1 1291 -1.05 -0.020 cydA b0733 "cytochrome d terminal oxidase, polypeptide subunit I" Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b0734 793 1112 -1.40 -0.147 890 1203 -1.35 -0.131 952 1046 0.005620 0.006300 H12 2 1 1292 -1.12 -0.050 cydB b0734 cytochrome d terminal oxidase polypeptide subunit II Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b0735 455 64 1.00 0.000 788 752 1.05 0.021 259 770 0.001531 0.004635 F4 3 2 2891 -1.55 -0.189 ybgE b0735 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0736 582 281 1.16 0.066 472 274 1.00 0.000 432 373 0.002548 0.002246 H4 3 2 2892 1.00 0.000 ybgC b0736 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0737 5988 5943 1.01 0.003 2685 2887 -1.08 -0.031 5966 2786 0.035202 0.016774 I11 4 1 333 2.10 0.322 tolQ b0737 "inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins" Cell processes membrane; Colicin-related functions b0738 396 402 -1.00 0.000 399 326 1.00 0.000 399 362 0.002354 0.002181 K11 4 1 334 1.00 0.000 tolR b0738 "putative inner membrane protein, involved in the tonB-independent uptake of group A colicins" "Phage, transposon, or plasmid" putative transport; Not classified b0739 1179 976 1.21 0.082 523 578 -1.11 -0.043 1077 551 0.006357 0.003315 M11 4 1 335 1.92 0.283 tolA b0739 "membrane spanning protein, required for outer membrane integrity" Cell processes membrane; Colicin-related functions b0740 4634 3420 1.36 0.132 2320 2717 -1.17 -0.069 4027 2519 0.023764 0.015163 O11 4 1 336 1.57 0.195 tolB b0740 periplasmic protein involved in the tonb-independent uptake of group A colicins Cell processes factor; Colicin-related functions b0741 5917 6039 -1.02 -0.009 3980 5013 -1.26 -0.100 5978 4497 0.035276 0.027073 E14 1 1 435 1.30 0.115 pal b0741 peptidoglycan-associated lipoprotein Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b0742 2729 2433 1.12 0.050 4472 5867 -1.31 -0.118 2581 5170 0.015228 0.031126 J4 3 2 2893 -2.04 -0.310 ybgF b0742 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0750 7442 7454 -1.00 -0.001 5381 5861 -1.09 -0.037 7448 5621 0.043948 0.033841 I24 4 2 2301 1.30 0.113 nadA b0750 "quinolinate synthetase, A protein" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" b0751 1247 1736 -1.39 -0.144 944 1661 -1.76 -0.245 1491 1302 0.008799 0.007841 E2 4 1 675 1.12 0.050 pnuC b0751 required for NMN transport Transport and binding proteins "transport; Transport of small molecules: Nucleosides, purines, pyrimidines" b0752 213 638 -1.28 -0.106 91 420 -1.00 0.000 426 256 0.002512 0.001539 D19 2 1 938 1.00 0.000 ybgR b0752 putative transport system permease protein Putative transport proteins putative transport; Not classified b0753 2306 2200 1.05 0.020 1438 1201 1.20 0.078 2253 1319 0.013295 0.007943 L4 3 2 2894 1.67 0.224 b0753 b0753 putative homeobox protein Putative regulatory proteins putative regulator; Not classified b0754 6388 4905 1.30 0.115 2526 3494 -1.38 -0.141 5646 3010 0.033317 0.018122 C13 4 2 1874 1.84 0.264 aroG b0754 "3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Phenylalanine b0755 31190 29196 1.07 0.029 5296 5868 -1.11 -0.044 30193 5582 0.178161 0.033607 J12 2 1 1293 5.30 0.724 gpmA b0755 phosphoglyceromutase 1 Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b0756 1636 1639 -1.00 -0.001 1121 977 1.15 0.059 1638 1049 0.009664 0.006316 K6 3 2 2134 1.53 0.185 galM b0756 galactose-1-epimerase (mutarotase) Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0757 6407 5535 1.16 0.064 1875 1671 1.12 0.050 5971 1773 0.035235 0.010674 K5 1 1 22 3.30 0.519 galK b0757 galactokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0758 568 459 1.14 0.055 406 595 -1.19 -0.076 513 501 0.003028 0.003016 M5 1 1 23 1.00 0.002 galT b0758 galactose-1-phosphate uridylyltransferase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0759 30917 28106 1.10 0.041 17569 17613 -1.00 -0.001 29512 17591 0.174139 0.105907 O5 1 1 24 1.64 0.216 galE b0759 UDP-galactose-4-epimerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b0760 656 1039 -1.58 -0.200 464 671 -1.34 -0.128 848 567 0.005002 0.003417 N20 4 1 1519 1.46 0.166 modF b0760 ATP-binding component of molybdate transport system Transport and binding proteins transport; Transport of small molecules: Anions b0761 732 927 -1.27 -0.102 405 650 -1.30 -0.114 830 528 0.004896 0.003176 G2 4 1 676 1.54 0.188 modE b0761 molybdate uptake regulatory protein Regulatory function regulator; Transport of small molecules: Anions b0762 1318 967 1.36 0.135 776 1008 -1.30 -0.114 1142 892 0.006741 0.005369 N4 3 2 2895 1.26 0.099 b0762 b0762 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0763 3342 4274 -1.28 -0.107 329 369 -1.00 0.000 3808 349 0.022468 0.002101 I2 4 1 677 7.49 0.874 modA b0763 molybdate-binding periplasmic protein; permease Transport and binding proteins transport; Transport of small molecules: Anions b0764 16796 16719 1.00 0.002 16769 15789 1.06 0.026 16758 16279 0.098884 0.098008 K2 4 1 678 1.01 0.004 modB b0764 molybdate transport permease protein Transport and binding proteins transport; Transport of small molecules: Anions b0765 1005 756 1.33 0.123 201 236 -1.00 0.000 880 218 0.005195 0.001315 M2 4 1 679 1.73 0.238 modC b0765 ATP-binding component of molybdate transport Transport and binding proteins transport; Transport of small molecules: Anions b0766 695 585 1.19 0.075 800 731 1.09 0.039 640 766 0.003778 0.004611 M6 3 2 2135 -1.22 -0.087 ybhA b0766 putative phosphatase Putative enzymes putative enzyme; Not classified b0767 2044 2035 1.00 0.002 2275 1748 1.30 0.114 2040 2012 0.012035 0.012112 O6 3 2 2136 -1.01 -0.003 ybhE b0767 putative isomerase "Hypothetical, unclassified, unknown" orf; Not classified b0768 152 104 1.00 0.000 214 133 1.00 0.000 128 174 0.000755 0.001045 O1 3 1 200 -1.00 0.000 ybhD b0768 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0769 96 22 1.00 0.000 -67 21 -1.00 0.000 59 -23 0.000349 -0.000138 P4 3 2 2896 1.00 0.000 ybhH b0769 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0770 340 340 1.00 0.000 -5 -109 1.00 0.000 340 -57 0.002006 -0.000343 F19 2 1 939 1.00 0.000 ybhI b0770 putative membrane pump protein "Hypothetical, unclassified, unknown" orf; Not classified b0771 209 13 1.00 0.000 123 -98 1.00 0.000 111 12 0.000654 0.000075 B6 3 2 2897 1.00 0.000 ybhJ b0771 putative enzyme Putative enzymes putative enzyme; Not classified b0772 1638 1530 1.07 0.029 1415 1086 1.30 0.115 1584 1250 0.009346 0.007527 A8 3 2 2137 1.24 0.094 ybhC b0772 putative pectinesterase "Hypothetical, unclassified, unknown" orf; Not classified b0773 649 646 1.00 0.002 450 -94 1.00 0.000 648 178 0.003821 0.001069 D6 3 2 2898 1.27 0.105 ybhB b0773 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0774 7751 8607 -1.11 -0.045 4074 3875 1.05 0.022 8179 3974 0.048262 0.023927 K24 4 2 2302 2.02 0.305 bioA b0774 "7,8-diaminopelargonic acid synthetase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b0775 4381 5047 -1.15 -0.061 2000 1876 1.07 0.028 4714 1938 0.027815 0.011667 M24 4 2 2303 2.38 0.377 bioB b0775 "biotin synthesis, sulfur insertion?" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b0776 9924 9425 1.05 0.022 7482 7797 -1.04 -0.018 9674 7639 0.057086 0.045994 O24 4 2 2304 1.24 0.094 bioF b0776 8-amino-7-oxononanoate synthase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b0777 1095 1229 -1.12 -0.050 627 599 1.05 0.020 1162 613 0.006856 0.003691 B1 1 2 2305 1.86 0.269 bioC b0777 biotin biosynthesis; reaction prior to pimeloyl CoA "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b0778 2956 2889 1.02 0.010 3210 3123 1.03 0.012 2923 3166 0.017245 0.019064 D1 1 2 2306 -1.11 -0.044 bioD b0778 dethiobiotin synthetase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b0779 1064 1502 -1.41 -0.150 850 824 1.03 0.013 1283 837 0.007569 0.005041 K21 1 2 1622 1.50 0.177 uvrB b0779 DNA repair; excision nuclease subunit B "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b0780 444 657 -1.31 -0.118 477 632 -1.26 -0.102 550 555 0.003246 0.003339 I6 3 1 597 -1.03 -0.012 ybhK b0780 putative structural protein Putative cell structure putative structure; Not classified b0781 2134 1611 1.32 0.122 1827 1752 1.04 0.018 1872 1789 0.011048 0.010773 F1 1 2 2307 1.03 0.011 moaA b0781 "molybdopterin biosynthesis, protein A" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b0782 2128 1937 1.10 0.041 1282 1292 -1.01 -0.003 2032 1287 0.011992 0.007749 H1 1 2 2308 1.55 0.190 moaB b0782 "molybdopterin biosynthesis, protein B" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b0783 5462 6148 -1.13 -0.051 3482 3718 -1.07 -0.028 5805 3600 0.034253 0.021674 J1 1 2 2309 1.58 0.199 moaC b0783 "molybdopterin biosynthesis, protein C" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b0784 4796 4727 1.01 0.006 2871 2589 1.11 0.045 4762 2730 0.028098 0.016434 L1 1 2 2310 1.71 0.233 moaD b0784 molybdopterin biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b0785 25196 24234 1.04 0.017 17389 16388 1.06 0.026 24715 16889 0.145835 0.101680 N1 1 2 2311 1.43 0.157 moaE b0785 "molybdopterin converting factor, subunit 2" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b0786 1073 1116 -1.04 -0.017 386 521 -1.04 -0.018 1095 454 0.006459 0.002731 G2 3 1 580 2.15 0.333 ybhL b0786 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0787 685 519 1.32 0.120 269 192 1.00 0.000 602 231 0.003552 0.001389 F6 3 2 2899 1.18 0.073 ybhM b0787 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0788 15521 15220 1.02 0.008 12946 12164 1.06 0.027 15370 12555 0.090695 0.075589 H6 3 2 2900 1.20 0.079 ybhN b0788 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0789 5122 5659 -1.10 -0.043 1570 1674 -1.07 -0.028 5391 1622 0.031809 0.009766 C8 3 2 2138 3.26 0.513 ybhO b0789 putative synthetase "Hypothetical, unclassified, unknown" orf; Not classified b0790 1350 769 1.75 0.244 853 786 1.08 0.035 1059 820 0.006250 0.004935 J6 3 2 2901 1.27 0.103 ybhP b0790 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0791 360 255 1.00 0.000 408 -100 1.00 0.000 307 154 0.001813 0.000928 L6 3 2 2902 1.00 0.000 ybhQ b0791 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0792 326 108 1.00 0.000 221 114 1.00 0.000 217 168 0.001280 0.001009 N6 3 2 2903 1.00 0.000 ybhR b0792 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0793 129 283 -1.00 0.000 149 -23 1.00 0.000 206 63 0.001216 0.000378 P6 3 2 2904 1.00 0.000 ybhS b0793 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0794 2169 2267 -1.05 -0.019 1558 1898 -1.22 -0.086 2218 1728 0.013088 0.010405 H19 2 1 940 1.26 0.100 ybhF b0794 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0795 28023 26133 1.07 0.030 11259 10400 1.08 0.034 27078 10829 0.159780 0.065199 G14 1 1 436 2.45 0.389 b0795 b0795 putative membrane protein putative membrane protein putative membrane; Not classified b0796 656 579 1.13 0.054 257 339 -1.00 0.000 617 298 0.003644 0.001793 B8 3 2 2905 1.21 0.084 ybiH b0796 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b0797 830 544 1.53 0.183 682 863 -1.27 -0.102 687 773 0.004055 0.004651 M21 1 2 1623 -1.15 -0.060 rhlE b0797 putative ATP-dependent RNA helicase Putative enzymes putative enzyme; Not classified b0798 275 -27 1.00 0.000 59 -94 1.00 0.000 124 -17 0.000731 -0.000103 D8 3 2 2906 1.00 0.000 ybiA b0798 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0799 1326 1275 1.04 0.017 1674 1820 -1.09 -0.036 1301 1747 0.007674 0.010517 P20 4 1 1520 -1.37 -0.137 dinG b0799 probably ATP-dependent helicase "DNA replication, repair, restriction/modification" "putative enzyme; DNA - replication, repair, restriction/modification" b0800 2879 3922 -1.36 -0.134 2909 2938 -1.01 -0.004 3400 2924 0.020064 0.017602 H1 2 2 2404 1.14 0.057 ybiB b0800 putative enzyme Putative enzymes putative enzyme; Not classified b0801 2127 4553 -2.14 -0.331 2922 3512 -1.20 -0.080 3340 3217 0.019709 0.019368 J1 2 2 2405 1.02 0.008 ybiC b0801 putative dehydrogenase Putative enzymes putative enzyme; Not classified b0802 389 697 -1.39 -0.144 120 188 -1.00 0.000 543 154 0.003204 0.000926 F8 3 2 2907 1.07 0.029 ybiJ b0802 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0803 2640 2622 1.01 0.003 1036 1287 -1.24 -0.094 2631 1161 0.015524 0.006992 H8 3 2 2908 2.22 0.346 ybiI b0803 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0804 161 407 -1.00 0.000 0 158 -1.00 0.000 284 79 0.001675 0.000476 L1 2 2 2406 1.00 0.000 ybiX b0804 putative enzyme Putative enzymes putative enzyme; Not classified b0805 648 596 1.09 0.036 271 -2 1.00 0.000 622 135 0.003672 0.000810 A3 3 1 201 1.22 0.088 b0805 b0805 putative outer membrane receptor for iron transport putative membrane protein putative membrane; Not classified b0806 418 399 1.00 0.000 175 173 1.00 0.000 408 174 0.002410 0.001047 J8 3 2 2909 1.00 0.000 ybiM b0806 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0807 309 203 1.00 0.000 533 488 1.07 0.028 256 511 0.001510 0.003075 L8 3 2 2910 -1.03 -0.011 ybiN b0807 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0808 3669 3411 1.08 0.032 1471 1850 -1.26 -0.100 3540 1660 0.020889 0.009996 N8 3 2 2911 2.09 0.320 ybiO b0808 putative transport protein Putative transport proteins putative transport; Not classified b0809 937 1015 -1.08 -0.035 746 746 -1.00 0.000 976 746 0.005762 0.004492 O2 4 1 680 1.28 0.108 glnQ b0809 ATP-binding component of glutamine high-affinity transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0810 2172 2148 1.01 0.005 1253 1851 -1.48 -0.170 2160 1552 0.012746 0.009342 A4 4 1 681 1.36 0.135 glnP b0810 glutamine high-affinity transport system; membrane component Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0811 3346 3695 -1.10 -0.043 2037 2947 -1.45 -0.161 3521 2492 0.020774 0.015003 C4 4 1 682 1.38 0.141 glnH b0811 periplasmic glutamine-binding protein; permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0812 13338 12294 1.08 0.035 264 353 -1.00 0.000 12816 308 0.075622 0.001856 J13 4 1 1109 25.21 1.402 dps b0812 "global regulator, starvation conditions" Regulatory function regulator; Global regulatory functions b0813 172 189 -1.00 0.000 343 130 1.00 0.000 181 236 0.001066 0.001422 P8 3 2 2912 -1.00 0.000 ybiF b0813 putative transmembrane subunit putative membrane protein putative membrane; Not classified b0814 6722 6661 1.01 0.004 8808 9498 -1.08 -0.033 6692 9153 0.039485 0.055106 I14 1 1 437 -1.40 -0.145 ompX b0814 outer membrane protein X Cell structure membrane; Outer membrane constituents b0815 11781 12621 -1.07 -0.030 11950 11996 -1.00 -0.002 12201 11973 0.071995 0.072083 N1 2 2 2407 -1.00 -0.001 ybiP b0815 putative enzyme Putative enzymes putative enzyme; Not classified b0816 1164 934 1.25 0.095 457 607 -1.21 -0.084 1049 532 0.006191 0.003205 B10 3 2 2913 1.93 0.286 b0816 b0816 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0817 2268 1891 1.20 0.079 1092 1176 -1.08 -0.032 2080 1134 0.012271 0.006827 D10 3 2 2914 1.80 0.255 b0817 b0817 putative toxin Putative transport proteins putative transport; Not classified b0818 941 609 1.55 0.189 2025 1841 1.10 0.042 775 1933 0.004573 0.011637 F10 3 2 2915 -2.54 -0.406 ybiR b0818 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0819 2454 1790 1.37 0.137 3426 3252 1.05 0.023 2122 3339 0.012521 0.020102 H10 3 2 2916 -1.61 -0.206 ybiS b0819 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0820 2846 2279 1.25 0.096 2121 2555 -1.20 -0.081 2563 2338 0.015121 0.014075 J19 2 1 941 1.07 0.031 ybiT b0820 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0821 1737 1679 1.03 0.015 1640 1389 1.18 0.072 1708 1514 0.010080 0.009118 J10 3 2 2917 1.11 0.044 ybiU b0821 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0822 257 217 1.00 0.000 141 113 1.00 0.000 237 127 0.001398 0.000764 L10 3 2 2918 1.00 0.000 b0822 b0822 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0823 1870 1747 1.07 0.029 1436 1486 -1.03 -0.015 1809 1461 0.010672 0.008793 D8 2 3 2408 1.21 0.084 ybiW b0823 putative formate acetyltransferase Putative enzymes putative enzyme; Not classified b0824 -350 691 -1.38 -0.140 289 385 -1.00 0.000 170 337 0.001005 0.002030 B3 2 2 2409 -1.00 0.000 ybiY b0824 putative pyruvate formate-lyase 2 activating enzyme Putative enzymes putative enzyme; Not classified b0825 3219 2599 1.24 0.093 2236 2112 1.06 0.025 2909 2174 0.017164 0.013089 E8 3 2 2139 1.31 0.118 mipB b0825 putative transaldolase Putative enzymes putative enzyme; Not classified b0826 6054 5911 1.02 0.010 5591 6006 -1.07 -0.031 5983 5799 0.035301 0.034912 B8 2 3 2312 1.01 0.005 moeB b0826 molybdopterin biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b0827 7177 6254 1.15 0.060 8635 9149 -1.06 -0.025 6716 8892 0.039626 0.053534 B3 1 2 2313 -1.35 -0.131 moeA b0827 molybdopterin biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b0828 5987 7391 -1.23 -0.092 5280 5192 1.02 0.007 6689 5236 0.039468 0.031523 E13 4 2 1875 1.25 0.098 ybiK b0828 putative asparaginase "Hypothetical, unclassified, unknown" orf; Not classified b0829 3983 3899 1.02 0.009 1198 1336 -1.12 -0.047 3941 1267 0.023256 0.007630 E4 4 1 683 3.05 0.484 b0829 b0829 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0830 602 527 1.14 0.058 286 173 1.00 0.000 564 229 0.003330 0.001380 G4 4 1 684 1.11 0.045 b0830 b0830 putative transport protein Putative transport proteins putative transport; Not classified b0831 3499 3314 1.06 0.024 1376 1752 -1.27 -0.105 3406 1564 0.020099 0.009417 I4 4 1 685 2.13 0.329 b0831 b0831 putative transport system permease protein Putative transport proteins putative transport; Not classified b0832 2552 2521 1.01 0.005 1435 1384 1.04 0.015 2536 1409 0.014967 0.008485 K4 4 1 686 1.76 0.246 b0832 b0832 putative transport system permease protein Putative transport proteins putative transport; Not classified b0833 414 219 1.00 0.000 368 385 -1.00 0.000 316 377 0.001867 0.002267 N10 3 2 2919 -1.00 0.000 b0833 b0833 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0834 1202 1238 -1.03 -0.013 1557 1480 1.05 0.022 1220 1519 0.007199 0.009143 P10 3 2 2920 -1.27 -0.104 b0834 b0834 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0835 1295 805 1.61 0.206 1512 1518 -1.00 -0.002 1050 1515 0.006196 0.009122 B12 3 2 2921 -1.47 -0.168 yliG b0835 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0836 2520 2356 1.07 0.029 1190 950 1.25 0.098 2438 1070 0.014387 0.006442 C3 3 1 202 2.23 0.349 b0836 b0836 putative receptor Putative factors putative factor; Not classified b0837 895 725 1.23 0.091 597 614 -1.03 -0.012 810 605 0.004779 0.003643 D3 2 2 2410 1.31 0.118 yliI b0837 putative dehydrogenase Putative enzymes putative enzyme; Not classified b0838 811 1284 -1.58 -0.200 810 768 1.06 0.023 1048 789 0.006182 0.004751 F3 2 2 2411 1.30 0.114 yliJ b0838 putative transferase Putative enzymes putative enzyme; Not classified b0839 2074 2230 -1.08 -0.032 1272 1061 1.20 0.079 2152 1166 0.012699 0.007022 K14 1 1 438 1.81 0.257 dacC b0839 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6 Cell structure "enzyme; Murein sacculus, peptidoglycan" b0840 1317 1084 1.22 0.085 1442 1133 1.27 0.105 1200 1287 0.007082 0.007751 E20 1 2 1995 -1.09 -0.039 deoR b0840 "transcriptional repressor for deo operon, tsx, nupG" Regulatory function regulator; Salvage of nucleosides and nucleotides b0841 4051 4499 -1.11 -0.046 6307 5176 1.22 0.086 4275 5742 0.025225 0.034569 D12 3 2 2922 -1.37 -0.137 ybjG b0841 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0842 1385 1514 -1.09 -0.039 756 977 -1.29 -0.111 1449 866 0.008553 0.005217 L19 2 1 942 1.64 0.215 cmr b0842 proton motive force efflux pump Transport and binding proteins transport; Transport of small molecules: Other b0843 554 699 -1.26 -0.101 260 275 -1.00 0.000 626 268 0.003696 0.001611 F12 3 2 2923 1.23 0.091 ybjH b0843 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0844 906 773 1.17 0.069 682 641 1.07 0.027 839 662 0.004952 0.003983 H12 3 2 2924 1.24 0.095 b0844 b0844 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0845 9080 9544 -1.05 -0.022 7417 8088 -1.09 -0.038 9312 7753 0.054947 0.046676 J12 3 2 2925 1.18 0.071 b0845 b0845 putative DEOR-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b0846 872 1023 -1.17 -0.070 486 587 -1.17 -0.070 947 537 0.005590 0.003232 L12 3 2 2926 1.73 0.238 b0846 b0846 putative DEOR-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b0847 1660 1540 1.08 0.033 2083 1927 1.08 0.034 1600 2005 0.009442 0.012071 H3 2 2 2412 -1.28 -0.107 b0847 b0847 putative transport protein Putative transport proteins putative transport; Not classified b0848 905 393 1.81 0.257 347 85 1.00 0.000 649 216 0.003829 0.001302 N12 3 2 2927 1.28 0.106 ybjM b0848 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0849 2624 2469 1.06 0.026 1420 1235 1.15 0.061 2546 1327 0.015026 0.007991 D3 1 2 2314 1.88 0.274 grxA b0849 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase "Biosynthesis of cofactors, prosthetic groups and carriers" "carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b0850 84 242 -1.00 0.000 345 493 -1.00 0.000 163 419 0.000959 0.002525 P12 3 2 2928 -1.00 0.000 ybjC b0850 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0851 1622 1242 1.31 0.116 905 1204 -1.33 -0.124 1432 1054 0.008451 0.006348 L13 4 1 1110 1.33 0.124 mdaA b0851 modulator of drug activity A Cell processes phenotype; Not classified b0852 134 756 -1.51 -0.180 475 559 -1.12 -0.048 445 517 0.002627 0.003111 M15 2 2 1695 -1.04 -0.016 rimK b0852 ribosomal protein S6 modification protein "Translation, post-translational modification" structural component; Ribosomes - maturation and modification b0853 1693 2488 -1.47 -0.167 1527 1989 -1.30 -0.115 2091 1758 0.012337 0.010586 E3 3 1 203 1.17 0.066 ybjN b0853 putative sensory transduction regulator Putative regulatory proteins putative regulator; Not classified b0854 10531 9517 1.11 0.044 3512 3721 -1.06 -0.025 10024 3616 0.059147 0.021773 M4 4 1 687 2.72 0.434 potF b0854 periplasmic putrescine-binding protein; permease protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0855 2853 2686 1.06 0.026 2337 2218 1.05 0.023 2770 2277 0.016343 0.013709 O4 4 1 688 1.19 0.076 potG b0855 ATP-binding component of putrescine transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0856 2712 2935 -1.08 -0.034 2623 2880 -1.10 -0.040 2823 2751 0.016661 0.016565 A6 4 1 689 1.01 0.002 potH b0856 putrescine transport protein; permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0857 1939 2871 -1.48 -0.170 1932 2301 -1.19 -0.076 2405 2116 0.014190 0.012742 C6 4 1 690 1.11 0.047 potI b0857 putrescine transport protein; permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0858 2226 1425 1.56 0.194 2862 2800 1.02 0.009 1826 2831 0.010773 0.017046 B14 3 2 2929 -1.58 -0.199 ybjO b0858 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0859 1694 2183 -1.29 -0.110 1890 1769 1.07 0.029 1939 1830 0.011439 0.011017 J3 2 2 2413 1.04 0.016 ybjF b0859 putative enzyme Putative enzymes putative enzyme; Not classified b0860 2664 2736 -1.03 -0.012 2478 2752 -1.11 -0.046 2700 2615 0.015932 0.015743 E6 4 1 691 1.01 0.005 artJ b0860 arginine 3rd transport system periplasmic binding protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0861 6836 6625 1.03 0.014 6322 6243 1.01 0.005 6731 6283 0.039715 0.037826 G6 4 1 692 1.05 0.021 artM b0861 arginine 3rd transport system permease protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0862 18611 21631 -1.16 -0.065 7264 7048 1.03 0.013 20121 7156 0.118726 0.043082 I6 4 1 693 2.76 0.440 artQ b0862 arginine 3rd transport system permease protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0863 1745 1664 1.05 0.021 1099 1274 -1.16 -0.064 1704 1187 0.010057 0.007144 K6 4 1 694 1.41 0.149 artI b0863 arginine 3rd transport system periplasmic binding protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0864 593 732 -1.23 -0.091 827 778 1.06 0.026 662 802 0.003909 0.004830 M6 4 1 695 -1.24 -0.092 artP b0864 ATP-binding component of 3rd arginine transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b0865 1300 1331 -1.02 -0.010 823 1034 -1.26 -0.099 1315 928 0.007761 0.005590 L3 2 2 2414 1.39 0.142 ybjP b0865 putative enzyme Putative enzymes putative enzyme; Not classified b0866 2549 1796 1.42 0.152 2360 1559 1.51 0.180 2172 1959 0.012819 0.011796 D14 3 2 2930 1.09 0.036 b0866 b0866 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0867 4042 4880 -1.21 -0.082 1011 1080 -1.07 -0.029 4461 1046 0.026322 0.006296 N13 4 1 1111 4.18 0.621 b0867 b0867 putative regulator Putative regulatory proteins putative regulator; Not classified b0868 929 1274 -1.37 -0.137 1417 1360 1.04 0.018 1102 1389 0.006500 0.008360 N3 2 2 2415 -1.29 -0.109 b0868 b0868 putative nucleotide di-P-sugar epimerase or dehydratase Putative enzymes putative enzyme; Not classified b0869 1559 990 1.58 0.197 637 774 -1.22 -0.085 1274 705 0.007519 0.004247 M14 1 1 439 1.77 0.248 ybjT b0869 putative dTDP-glucose enzyme Putative enzymes putative enzyme; Not classified b0870 4552 4272 1.07 0.028 2949 2746 1.07 0.031 4412 2847 0.026032 0.017142 P3 2 2 2416 1.52 0.181 ybjU b0870 putative arylsulfatase Putative enzymes putative enzyme; Not classified b0871 14186 13835 1.03 0.011 4176 3837 1.09 0.037 14011 4006 0.082672 0.024121 A7 1 1 25 3.43 0.535 poxB b0871 pyruvate oxidase Energy metabolism enzyme; Degradation of small molecules: Carbon compounds b0872 6931 6427 1.08 0.033 2546 2746 -1.08 -0.033 6679 2646 0.039408 0.015929 L12 2 1 1294 2.47 0.393 b0872 b0872 putative enzyme Putative enzymes putative enzyme; Not classified b0873 1191 825 1.44 0.160 1603 1050 1.53 0.184 1008 1326 0.005945 0.007986 F14 3 2 2931 -1.34 -0.128 ybjW b0873 putative prismane "Hypothetical, unclassified, unknown" orf; Not classified b0874 650 612 1.06 0.026 407 458 -1.00 0.000 631 433 0.003724 0.002605 O14 1 1 440 1.24 0.094 ybjE b0874 putative surface protein Putative cell structure putative structure; Not classified b0875 438 568 -1.14 -0.055 550 547 1.00 0.002 503 549 0.002968 0.003303 O6 4 1 696 -1.10 -0.042 aqpZ b0875 transmembrane water channel; aquaporin Z Transport and binding proteins transport; Transport of small molecules: Other b0876 976 1022 -1.05 -0.020 519 716 -1.38 -0.140 999 618 0.005893 0.003718 H14 3 2 2932 1.59 0.200 ybjD b0876 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0877 177 855 -1.71 -0.233 1117 1236 -1.11 -0.044 516 1176 0.003044 0.007082 B5 2 2 2417 -2.33 -0.367 ybjX b0877 putative enzyme Putative enzymes putative enzyme; Not classified b0878 5796 5752 1.01 0.003 4913 4766 1.03 0.013 5774 4840 0.034071 0.029137 K6 3 1 598 1.17 0.068 b0878 b0878 putative membrane protein putative membrane protein putative membrane; Not classified b0879 1031 1143 -1.11 -0.045 927 1044 -1.13 -0.052 1087 985 0.006413 0.005933 N19 2 1 943 1.08 0.034 ybjZ b0879 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0880 3439 3531 -1.03 -0.011 996 973 1.02 0.011 3485 984 0.020564 0.005927 P13 4 1 1112 3.47 0.540 cspD b0880 cold shock protein Cell processes phenotype; Not classified b0881 1204 1438 -1.19 -0.077 279 36 1.00 0.000 1321 157 0.007793 0.000946 J14 3 2 2933 2.60 0.415 yljA b0881 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0882 21916 20826 1.05 0.022 12174 12062 1.01 0.004 21371 12118 0.126104 0.072957 O15 2 2 1696 1.73 0.238 clpA b0882 ATP-binding component of serine protease Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b0884 2653 2431 1.09 0.038 4130 5683 -1.38 -0.139 2542 4907 0.014999 0.029541 A17 2 2 1697 -1.97 -0.294 infA b0884 protein chain initiation factor IF-1 "Translation, post-translational modification" factor; Proteins - translation and modification b0885 -97 464 -1.00 0.000 362 692 -1.38 -0.141 183 527 0.001082 0.003175 C17 2 2 1698 -1.06 -0.025 aat b0885 "leucyl, phenylalanyl-tRNA-protein transferase" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0886 5703 5272 1.08 0.034 4967 5035 -1.01 -0.006 5488 5001 0.032381 0.030111 A8 4 1 697 1.08 0.032 cydC b0886 ATP-binding component of cytochrome-related transport Transport and binding proteins transport; Transport of small molecules: Other b0887 900 1106 -1.23 -0.089 876 1121 -1.28 -0.107 1003 999 0.005920 0.006013 C8 4 1 698 -1.02 -0.007 cydD b0887 "ATP-binding component of cytochrome-related transport, Zn sensitive" Transport and binding proteins transport; Not classified b0888 1492 1657 -1.11 -0.045 1992 1721 1.16 0.064 1575 1856 0.009292 0.011175 G20 1 2 1996 -1.20 -0.080 trxB b0888 thioredoxin reductase Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b0889 2535 1576 1.61 0.206 625 617 1.01 0.005 2056 621 0.012130 0.003740 G8 3 2 2140 3.24 0.511 lrp b0889 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b0890 190 178 1.00 0.000 164 122 1.00 0.000 184 143 0.001086 0.000862 B15 4 1 1113 1.00 0.000 ftsK b0890 cell division protein Cell processes phenotype; Cell division b0891 2867 2486 1.15 0.062 2626 2616 1.00 0.002 2676 2621 0.015793 0.015781 E8 4 1 699 1.00 0.000 lolA b0891 periplasmic protein effects translocation of lipoproteins from inner membrane to outer Transport and binding proteins "transport; Protein, peptide secretion" b0892 7165 6513 1.10 0.041 6541 6322 1.03 0.015 6839 6431 0.040352 0.038721 B22 4 1 1521 1.04 0.018 ycaJ b0892 putative polynucleotide enzyme Putative enzymes putative enzyme; Not classified b0893 2189 2733 -1.25 -0.096 4407 4531 -1.03 -0.012 2461 4469 0.014523 0.026907 E17 2 2 1699 -1.85 -0.268 serS b0893 serine tRNA synthetase; also charges selenocystein tRNA with serine "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0894 310 662 -1.32 -0.122 49 538 -1.08 -0.031 486 293 0.002868 0.001766 N12 2 1 1295 1.00 0.000 dmsA b0894 anaerobic dimethyl sulfoxide reductase subunit A Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0895 9363 8364 1.12 0.049 5241 6664 -1.27 -0.104 8864 5953 0.052301 0.035838 P12 2 1 1296 1.46 0.164 dmsB b0895 anaerobic dimethyl sulfoxide reductase subunit B Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0896 4478 4005 1.12 0.049 3235 3721 -1.15 -0.061 4241 3478 0.025027 0.020940 B14 2 1 1297 1.20 0.077 dmsC b0896 anaerobic dimethyl sulfoxide reductase subunit C Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0897 5999 5644 1.06 0.026 411 154 1.00 0.000 5821 282 0.034350 0.001699 L14 3 2 2934 11.45 1.059 ycaC b0897 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0898 616 936 -1.52 -0.182 913 1065 -1.17 -0.067 776 989 0.004579 0.005954 P19 2 1 944 -1.30 -0.114 ycaD b0898 putative transport Putative transport proteins putative transport; Not classified b0899 1531 1746 -1.14 -0.057 1600 1754 -1.10 -0.040 1638 1677 0.009667 0.010094 B21 2 1 945 -1.04 -0.019 b0899 b0899 putative transport Putative transport proteins putative transport; Not classified b0900 650 649 1.00 0.000 423 522 -1.04 -0.019 649 473 0.003832 0.002847 G3 3 1 204 1.28 0.106 ycaN b0900 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b0901 360 357 1.00 0.000 341 101 1.00 0.000 358 221 0.002113 0.001331 N14 3 2 2935 1.00 0.000 ycaK b0901 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0902 566 1157 -2.04 -0.311 1137 1313 -1.15 -0.062 861 1225 0.005082 0.007377 D14 2 1 1298 -1.45 -0.162 pflA b0902 pyruvate formate lyase activating enzyme 1 Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0903 10919 12110 -1.11 -0.045 5528 5526 1.00 0.000 11515 5527 0.067945 0.033275 F14 2 1 1299 2.04 0.310 pflB b0903 formate acetyltransferase 1 Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0904 3652 3041 1.20 0.079 3204 3133 1.02 0.010 3347 3168 0.019747 0.019076 C7 1 1 26 1.04 0.015 focA b0904 probable formate transporter (formate channel 1) Putative transport proteins putative transport; Degradation of small molecules: Carbon compounds b0905 738 819 -1.11 -0.045 1441 1270 1.13 0.055 779 1355 0.004595 0.008161 P14 3 2 2936 -1.78 -0.249 ycaO b0905 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0906 4942 4820 1.03 0.011 5987 4829 1.24 0.093 4881 5408 0.028800 0.032558 B16 3 2 2937 -1.13 -0.053 ycaP b0906 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0907 8625 8379 1.03 0.013 3379 3248 1.04 0.017 8502 3313 0.050167 0.019948 G13 4 2 1876 2.51 0.401 serC b0907 3-phosphoserine aminotransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Serine b0908 7267 7395 -1.02 -0.008 4061 4682 -1.15 -0.062 7331 4371 0.043260 0.026318 I13 4 2 1877 1.64 0.216 aroA b0908 5-enolpyruvylshikimate-3-phosphate synthetase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Chorismate b0909 337 152 1.00 0.000 129 142 -1.00 0.000 244 136 0.001443 0.000817 D16 3 2 2938 1.00 0.000 ycaL b0909 putative heat shock protein Putative factors putative factor; Not classified b0910 845 993 -1.18 -0.070 1355 1240 1.09 0.038 919 1297 0.005423 0.007811 I20 1 2 1997 -1.44 -0.158 cmk b0910 cytidylate kinase Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b0911 10798 12572 -1.16 -0.066 47344 48242 -1.02 -0.008 11685 47793 0.068949 0.287743 G17 2 2 1700 -4.17 -0.620 rpsA b0911 30S ribosomal subunit protein S1 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b0912 10379 8597 1.21 0.082 3460 4176 -1.21 -0.082 9488 3818 0.055985 0.022989 D22 4 1 1522 2.44 0.387 himD b0912 "integration host factor (IHF), beta subunit; site-specific recombination" "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b0913 5258 4204 1.25 0.097 5063 5209 -1.03 -0.012 4731 5136 0.027918 0.030922 F16 3 2 2939 -1.11 -0.044 ycaI b0913 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0914 1694 1563 1.08 0.035 868 970 -1.12 -0.049 1629 919 0.009610 0.005532 G8 4 1 700 1.74 0.240 msbA b0914 ATP-binding transport protein; multicopy suppressor of htrB Transport and binding proteins transport; Transport of small molecules: Other b0915 631 991 -1.57 -0.196 719 884 -1.23 -0.090 811 801 0.004786 0.004825 D5 2 2 2418 -1.01 -0.004 ycaH b0915 putative EC 1.2 enzyme Putative enzymes putative enzyme; Not classified b0916 871 886 -1.02 -0.007 1148 864 1.33 0.123 879 1006 0.005185 0.006056 H16 3 2 2940 -1.17 -0.067 ycaQ b0916 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0917 2263 1782 1.27 0.104 1819 1768 1.03 0.012 2023 1794 0.011934 0.010798 J16 3 2 2941 1.11 0.043 ycaR b0917 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0918 951 814 1.17 0.067 877 738 1.19 0.075 882 807 0.005206 0.004861 A16 1 1 441 1.07 0.030 kdsB b0918 CTP:CMP-3-deoxy-D-manno-octulosonate transferase Cell structure enzyme; Surface polysaccharides & antigens b0919 834 551 1.52 0.181 616 662 -1.07 -0.031 692 639 0.004086 0.003849 L16 3 2 2942 1.06 0.026 b0919 b0919 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0920 4959 4341 1.14 0.058 3455 3559 -1.03 -0.013 4650 3507 0.027439 0.021116 N16 3 2 2943 1.30 0.114 ycbC b0920 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0921 1201 943 1.27 0.105 948 1245 -1.31 -0.118 1072 1097 0.006327 0.006604 P16 3 2 2944 -1.04 -0.019 smtA b0921 S-adenosylmethionine-dependent methyltransferase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0922 3130 4710 -1.50 -0.178 3180 5100 -1.60 -0.205 3920 4140 0.023130 0.024923 I17 2 2 1701 -1.08 -0.032 mukF b0922 mukF protein (killing factor KICB) Cell processes factor; Cell killing b0923 1961 1720 1.14 0.057 2772 2597 1.07 0.028 1840 2684 0.010859 0.016161 B18 3 2 2945 -1.49 -0.173 mukE b0923 "orf, hypothetical protein" Cell processes factor; Cell killing b0924 387 375 1.00 0.000 608 397 1.22 0.085 381 503 0.002247 0.003027 D15 4 1 1114 -1.01 -0.004 mukB b0924 kinesin-like cell division protein involved in chromosome partitioning Cell processes structural component; Cell division b0925 1007 747 1.35 0.130 230 413 -1.00 0.000 877 322 0.005176 0.001936 F5 2 2 2419 1.73 0.237 ycbB b0925 putative amidase Putative enzymes putative enzyme; Not classified b0926 3053 1970 1.55 0.190 2536 2506 1.01 0.005 2512 2521 0.014820 0.015176 D18 3 2 2946 -1.02 -0.010 ycbK b0926 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0927 1275 960 1.33 0.123 812 832 -1.02 -0.011 1118 822 0.006595 0.004948 F18 3 2 2947 1.33 0.125 ycbL b0927 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0928 5851 6481 -1.11 -0.044 1665 2316 -1.39 -0.143 6166 1991 0.036385 0.011985 K13 4 2 1878 3.04 0.482 aspC b0928 aspartate aminotransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Aspartate b0929 27521 23005 1.20 0.078 10911 10891 1.00 0.001 25263 10901 0.149070 0.065631 C16 1 1 442 2.27 0.356 ompF b0929 outer membrane protein 1a (Ia;b;F) Cell structure membrane; Outer membrane constituents b0930 1584 1481 1.07 0.029 1889 2468 -1.31 -0.116 1533 2178 0.009044 0.013114 K17 2 2 1702 -1.45 -0.161 asnS b0930 asparagine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b0931 4168 3534 1.18 0.072 1792 1719 1.04 0.018 3851 1755 0.022726 0.010569 F3 1 2 2315 2.15 0.332 pncB b0931 nicotinate phosphoribosyltransferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" b0932 2371 3688 -1.56 -0.192 2261 2557 -1.13 -0.053 3029 2409 0.017875 0.014503 M17 2 2 1703 1.23 0.091 pepN b0932 aminopeptidase N Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b0933 1757 1948 -1.11 -0.045 1590 1391 1.14 0.058 1852 1491 0.010930 0.008975 I3 3 1 205 1.22 0.086 ycbE b0933 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0934 628 700 -1.11 -0.047 91 254 -1.00 0.000 664 173 0.003919 0.001040 D21 2 1 946 1.31 0.116 ycbM b0934 putative transport system permease protein Putative transport proteins putative transport; Not classified b0935 971 691 1.40 0.148 754 680 1.11 0.045 831 717 0.004904 0.004314 H18 3 2 2948 1.14 0.056 ycbN b0935 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0936 749 426 1.50 0.175 585 492 1.17 0.068 587 538 0.003466 0.003242 J18 3 2 2949 1.07 0.029 ycbO b0936 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0937 642 425 1.28 0.108 656 474 1.31 0.118 533 565 0.003146 0.003400 L18 3 2 2950 -1.08 -0.034 ycbP b0937 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0938 259 277 -1.00 0.000 181 95 1.00 0.000 268 138 0.001584 0.000830 E16 1 1 443 1.00 0.000 ycbQ b0938 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0939 3168 3373 -1.06 -0.027 2295 1941 1.18 0.073 3271 2118 0.019301 0.012754 B2 2 1 1249 1.51 0.180 ycbR b0939 putative chaperone Putative factors putative factor; Not classified b0940 3096 2692 1.15 0.061 1045 1147 -1.10 -0.040 2894 1096 0.017074 0.006599 G16 1 1 444 2.59 0.413 ycbS b0940 putative outer membrane protein putative membrane protein putative membrane; Not classified b0941 480 393 1.00 0.000 295 120 1.00 0.000 436 207 0.002575 0.001248 I16 1 1 445 1.00 0.000 b0941 b0941 homolog of Salmonella FimH protein Putative cell structure putative structure; Not classified b0942 320 209 1.00 0.000 100 278 -1.00 0.000 265 189 0.001561 0.001139 K16 1 1 446 1.00 0.000 b0942 b0942 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0943 159 172 -1.00 0.000 175 297 -1.00 0.000 166 236 0.000977 0.001423 M16 1 1 447 -1.00 0.000 b0943 b0943 putative fimbrial-like protein Putative cell structure putative structure; Not classified b0944 6245 7237 -1.16 -0.064 1764 2145 -1.22 -0.085 6741 1954 0.039776 0.011765 D2 2 1 1250 3.38 0.529 ycbF b0944 putative chaperone Putative factors putative factor; Not classified b0945 747 573 1.30 0.115 1693 1340 1.26 0.102 660 1516 0.003895 0.009130 K20 1 2 1998 -2.34 -0.370 pyrD b0945 dihydro-orotate dehydrogenase Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b0946 653 589 1.11 0.044 537 412 1.07 0.031 621 474 0.003664 0.002856 N18 3 2 2951 1.22 0.087 ycbW b0946 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0947 536 527 1.02 0.008 711 527 1.35 0.130 532 619 0.003136 0.003728 P18 3 2 2952 -1.19 -0.075 b0947 b0947 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0948 2247 2286 -1.02 -0.007 2897 2506 1.16 0.063 2267 2701 0.013375 0.016262 B20 3 2 2953 -1.22 -0.085 ycbY b0948 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0949 1336 1611 -1.21 -0.081 2776 2945 -1.06 -0.026 1473 2860 0.008693 0.017220 F21 2 1 947 -1.98 -0.297 uup b0949 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b0950 3331 3686 -1.11 -0.044 1892 2161 -1.14 -0.058 3509 2027 0.020703 0.012203 D11 4 2 2634 1.70 0.230 pqiA b0950 paraquat-inducible protein A Cell processes phenotype; Not classified b0951 7448 7300 1.02 0.009 7414 6926 1.07 0.030 7374 7170 0.043510 0.043166 F11 4 2 2635 1.01 0.003 pqiB b0951 paraquat-inducible protein B Cell processes phenotype; Not classified b0952 763 684 1.11 0.047 891 808 1.10 0.043 723 849 0.004268 0.005114 D20 3 2 2954 -1.20 -0.079 ymbA b0952 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0953 404715 371473 1.09 0.037 172426 171002 1.01 0.004 388094 171714 2.290029 1.033815 O17 2 2 1704 2.22 0.345 rmf b0953 ribosome modulation factor "Translation, post-translational modification" factor; Ribosomes - maturation and modification b0954 629 912 -1.45 -0.161 1971 1936 1.02 0.008 770 1954 0.004546 0.011761 K8 2 2 2046 -2.59 -0.413 fabA b0954 "beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase" Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b0955 1561 1401 1.11 0.047 1824 2261 -1.24 -0.093 1481 2042 0.008738 0.012297 H5 2 2 2420 -1.41 -0.148 b0955 b0955 putative ATP-dependent protease Putative enzymes putative enzyme; Not classified b0956 714 884 -1.24 -0.093 518 902 -1.74 -0.241 799 710 0.004713 0.004275 J5 2 2 2421 1.10 0.042 ycbG b0956 putative dehydrogenase Putative enzymes putative enzyme; Not classified b0957 20479 17159 1.19 0.077 22829 21958 1.04 0.017 18819 22393 0.111046 0.134821 O16 1 1 448 -1.21 -0.084 ompA b0957 outer membrane protein 3a (II*;G;d) Cell structure membrane; Outer membrane constituents b0958 345 449 -1.00 0.000 294 327 -1.00 0.000 397 310 0.002344 0.001868 F15 4 1 1115 1.00 0.000 sulA b0958 suppressor of lon; inhibits cell division and ftsZ ring formation Cell processes phenotype; Cell division b0959 255 194 1.00 0.000 201 261 -1.00 0.000 224 231 0.001323 0.001392 F20 3 2 2955 -1.00 0.000 b0959 b0959 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0960 594 385 1.19 0.075 759 427 1.52 0.182 489 593 0.002888 0.003570 H20 3 2 2956 -1.19 -0.076 b0960 b0960 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0961 227 120 1.00 0.000 419 392 1.00 0.000 174 406 0.001025 0.002444 J20 3 2 2957 -1.00 0.000 yccF b0961 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0962 10789 10901 -1.01 -0.004 7952 8093 -1.02 -0.008 10845 8023 0.063993 0.048300 F22 4 1 1523 1.32 0.122 helD b0962 DNA helicase IV "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b0963 1831 1446 1.27 0.103 1569 1319 1.19 0.075 1639 1444 0.009668 0.008693 L20 3 2 2958 1.11 0.046 mgsA b0963 methylglyoxal synthase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0964 1414 1318 1.07 0.031 3015 3510 -1.16 -0.066 1366 3262 0.008062 0.019639 N20 3 2 2959 -2.44 -0.387 b0964 b0964 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0965 8625 7987 1.08 0.033 6837 7102 -1.04 -0.016 8306 6969 0.049010 0.041959 P20 3 2 2960 1.17 0.067 b0965 b0965 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0966 783 1019 -1.30 -0.114 2198 1903 1.16 0.063 901 2050 0.005317 0.012344 B22 3 2 2961 -2.32 -0.366 yccV b0966 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0967 1298 797 1.63 0.212 1715 1864 -1.09 -0.036 1048 1790 0.006184 0.010774 D22 3 2 2962 -1.74 -0.241 b0967 b0967 putative oxidoreductase Putative enzymes putative enzyme; Not classified b0968 900 427 1.80 0.255 688 247 1.38 0.138 664 467 0.003916 0.002814 F22 3 2 2963 1.31 0.116 b0968 b0968 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0969 3992 3044 1.31 0.118 1220 1384 -1.13 -0.055 3518 1302 0.020759 0.007838 I8 3 2 2141 2.65 0.423 yccK b0969 putative sulfite reductase (EC 1.8.-.-) "Hypothetical, unclassified, unknown" orf; Not classified b0970 1413 1495 -1.06 -0.024 2682 2606 1.03 0.012 1454 2644 0.008578 0.015917 H21 2 1 948 -1.86 -0.268 yccA b0970 putative carrier/transport protein Putative transport proteins putative transport; Not classified b0972 11146 10708 1.04 0.017 6607 6474 1.02 0.009 10927 6540 0.064476 0.039375 H14 2 1 1300 1.64 0.214 hyaA b0972 hydrogenase-1 small subunit Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b0973 -46 21 -1.00 0.000 -11 11 -1.00 0.000 -12 0 -0.000072 0.000002 J14 2 1 1301 -1.00 0.000 hyaB b0973 hydrogenase-1 large subunit Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b0974 -169 123 -1.00 0.000 -46 89 -1.00 0.000 -23 21 -0.000138 0.000129 L14 2 1 1302 -1.00 0.000 hyaC b0974 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit Putative enzymes "putative enzyme; Energy metabolism, carbon: Aerobic respiration" b0975 11935 12511 -1.05 -0.020 4649 5653 -1.22 -0.085 12223 5151 0.072123 0.031011 N14 2 1 1303 2.33 0.367 hyaD b0975 processing of HyaA and HyaB proteins Energy metabolism "factor; Energy metabolism, carbon: Aerobic respiration" b0976 59 746 -1.49 -0.174 223 434 -1.00 0.000 402 329 0.002375 0.001978 P14 2 1 1304 1.00 0.000 hyaE b0976 processing of HyaA and HyaB proteins Energy metabolism "factor; Energy metabolism, carbon: Aerobic respiration" b0977 16271 15349 1.06 0.025 18255 18910 -1.04 -0.015 15810 18582 0.093290 0.111877 B16 2 1 1305 -1.20 -0.079 hyaF b0977 nickel incorporation into hydrogenase-1 proteins Energy metabolism "phenotype; Energy metabolism, carbon: Aerobic respiration" b0978 26423 23969 1.10 0.042 16858 18605 -1.10 -0.043 25196 17732 0.148675 0.106754 D16 2 1 1306 1.39 0.144 appC b0978 "probable third cytochrome oxidase, subunit I" Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b0979 590 449 1.18 0.072 261 301 -1.00 0.000 520 281 0.003068 0.001692 F16 2 1 1307 1.02 0.010 appB b0979 "probable third cytochrome oxidase, subunit II" Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b0980 2178 2209 -1.01 -0.006 964 1356 -1.41 -0.148 2193 1160 0.012943 0.006983 K8 3 2 2142 1.85 0.268 appA b0980 phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b0981 642 420 1.28 0.108 414 529 -1.06 -0.025 531 472 0.003134 0.002839 H22 3 2 2964 1.04 0.019 yccC b0981 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0982 2116 2099 1.01 0.004 2010 2327 -1.16 -0.064 2108 2168 0.012437 0.013054 L5 2 2 2422 -1.05 -0.021 yccY b0982 putative phosphatase Putative enzymes putative enzyme; Not classified b0983 766 732 1.05 0.020 577 520 1.11 0.045 749 549 0.004419 0.003302 A18 1 1 449 1.34 0.127 yccZ b0983 putative function in exopolysaccharide production Putative factors phenotype; Not classified b0984 2054 2012 1.02 0.009 1488 1236 1.20 0.080 2033 1362 0.011997 0.008200 J22 3 2 2965 1.46 0.165 ymcA b0984 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0985 134 36 1.00 0.000 198 225 -1.00 0.000 85 211 0.000502 0.001273 L22 3 2 2966 -1.00 0.000 ymcB b0985 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0986 1905 1909 -1.00 -0.001 884 964 -1.09 -0.037 1907 924 0.011252 0.005563 K3 3 1 206 2.02 0.306 ymcC b0986 putative regulator Putative regulatory proteins putative regulator; Not classified b0987 773 716 1.08 0.034 1473 1301 1.13 0.054 744 1387 0.004392 0.008350 N22 3 2 2967 -1.90 -0.279 ymcD b0987 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0988 979 985 -1.01 -0.003 1115 1199 -1.08 -0.032 982 1157 0.005795 0.006967 A13 4 1 337 -1.20 -0.080 insB_4 b0988 IS1 protein InsB "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b0989 4224 4015 1.05 0.022 2952 3074 -1.04 -0.018 4119 3013 0.024308 0.018138 H11 4 2 2636 1.34 0.127 cspH b0989 cold shock-like protein Putative factors phenotype; Not classified b0990 78 69 1.00 0.000 19 48 -1.00 0.000 74 33 0.000435 0.000200 H15 4 1 1116 1.00 0.000 cspG b0990 homolog of Salmonella cold shock protein "Hypothetical, unclassified, unknown" phenotype; Not classified b0991 294 156 1.00 0.000 499 705 -1.41 -0.149 225 602 0.001328 0.003623 P22 3 2 2968 -1.21 -0.082 sfa b0991 suppresses fabA and ts growth mutation "Hypothetical, unclassified, unknown" phenotype; Not classified b0992 515 449 1.03 0.012 813 917 -1.13 -0.052 482 865 0.002842 0.005206 B24 3 2 2969 -1.74 -0.239 yccM b0992 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b0993 928 989 -1.07 -0.028 249 161 1.00 0.000 958 205 0.005654 0.001234 H16 2 1 1308 1.88 0.275 torS b0993 sensor protein torS (regulator TorR) Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0994 358 705 -1.41 -0.149 277 198 1.00 0.000 532 237 0.003137 0.001430 J16 2 1 1309 1.05 0.019 torT b0994 "part of regulation of tor operon, periplasmic" Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b0995 205 291 -1.00 0.000 35 244 -1.00 0.000 248 140 0.001464 0.000842 L16 2 1 1310 1.00 0.000 torR b0995 response transcriptional regulator for torA (sensor TorS) Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b0996 220 372 -1.00 0.000 76 185 -1.00 0.000 296 131 0.001746 0.000787 N16 2 1 1311 1.00 0.000 torC b0996 "trimethylamine N-oxide reductase, cytochrome c-type subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0997 372 517 -1.03 -0.015 235 480 -1.00 0.000 445 358 0.002624 0.002154 P16 2 1 1312 1.00 0.000 torA b0997 trimethylamine N-oxide reductase subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0998 758 1007 -1.33 -0.123 507 611 -1.20 -0.081 883 559 0.005208 0.003368 B18 2 1 1313 1.55 0.189 torD b0998 part of trimethylamine-N-oxide oxidoreductase Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b0999 1255 1237 1.01 0.006 432 309 1.00 0.000 1246 371 0.007352 0.002231 D24 3 2 2970 2.45 0.389 yccD b0999 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1000 1689 1838 -1.09 -0.037 393 432 -1.00 0.000 1764 413 0.010407 0.002485 J15 4 1 1117 3.47 0.540 cbpA b1000 curved DNA-binding protein; functions closely related to DnaJ Cell processes factor; Chaperones b1001 257 131 1.00 0.000 54 41 1.00 0.000 194 48 0.001145 0.000287 F24 3 2 2971 1.00 0.000 yccE b1001 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1002 1117 848 1.32 0.120 970 631 1.54 0.187 982 801 0.005797 0.004820 M8 3 2 2143 1.20 0.080 agp b1002 periplasmic glucose-1-phosphatase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1003 5404 5190 1.04 0.018 638 516 1.24 0.092 5297 577 0.031256 0.003474 H24 3 2 2972 9.00 0.954 yccJ b1003 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1004 6206 6326 -1.02 -0.008 2417 2250 1.07 0.031 6266 2334 0.036973 0.014049 M13 4 2 1879 2.63 0.420 wrbA b1004 trp repressor binding protein; affects association of trp repressor and operator Regulatory function regulator; Amino acid biosynthesis: Tryptophan b1005 11475 9636 1.19 0.076 6603 6751 -1.02 -0.010 10555 6677 0.062283 0.040198 J24 3 2 2973 1.55 0.190 ycdF b1005 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1006 526 374 1.05 0.022 363 352 1.00 0.000 450 358 0.002655 0.002153 N5 2 2 2423 1.00 0.000 ycdG b1006 putative transport protein Putative transport proteins putative transport; Not classified b1007 610 353 1.22 0.086 175 326 -1.00 0.000 481 250 0.002840 0.001507 L24 3 2 2974 1.00 0.000 b1007 b1007 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1008 181 69 1.00 0.000 273 186 1.00 0.000 125 230 0.000735 0.001383 N24 3 2 2975 -1.00 0.000 b1008 b1008 putative enzyme Putative enzymes putative enzyme; Not classified b1009 3157 2287 1.38 0.140 2084 2244 -1.08 -0.032 2722 2164 0.016062 0.013029 O8 3 2 2144 1.23 0.091 b1009 b1009 putative acetyltransferase Putative enzymes putative enzyme; Not classified b1010 2030 2172 -1.07 -0.029 3702 3641 1.02 0.007 2101 3671 0.012398 0.022103 N8 2 3 2976 -1.78 -0.251 b1010 b1010 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1011 1601 1445 1.11 0.044 1258 996 1.26 0.102 1523 1127 0.008987 0.006784 P5 2 2 2424 1.32 0.122 b1011 b1011 putative synthetase Putative enzymes putative enzyme; Not classified b1012 14157 17818 -1.26 -0.100 10012 9837 1.02 0.008 15987 9925 0.094335 0.059752 B2 4 2 2977 1.58 0.198 b1012 b1012 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1013 2490 3696 -1.48 -0.171 1726 1954 -1.13 -0.054 3093 1840 0.018250 0.011075 D2 4 2 2978 1.65 0.217 ycdC b1013 putative tet operon regulator Putative regulatory proteins putative regulator; Not classified b1014 100 16 1.00 0.000 82 75 1.00 0.000 58 79 0.000342 0.000473 O13 4 2 1880 -1.00 0.000 putA b1014 "proline dehydrogenase, P5C dehydrogenase" Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b1015 6351 5905 1.08 0.032 3822 4529 -1.18 -0.074 6128 4176 0.036160 0.025140 I8 4 1 701 1.44 0.158 putP b1015 major sodium/proline symporter Transport and binding proteins transport; Transport of small molecules: Cations b1016 525 550 -1.05 -0.020 504 474 1.01 0.003 537 489 0.003171 0.002943 F2 4 2 2979 1.06 0.024 b1016 b1016 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1017 2096 2801 -1.34 -0.126 1515 1524 -1.01 -0.003 2448 1519 0.014448 0.009146 D18 2 1 1314 1.58 0.199 b1017 b1017 putative cytochrome Putative enzymes putative carrier; Not classified b1018 5800 5701 1.02 0.007 3545 4514 -1.27 -0.105 5751 4030 0.033932 0.024260 H2 4 2 2980 1.40 0.146 ycdO b1018 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1019 2253 1815 1.24 0.094 1734 2215 -1.28 -0.106 2034 1974 0.012002 0.011885 J2 4 2 2981 1.01 0.004 ycdB b1019 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1020 1090 1312 -1.20 -0.080 1092 351 2.18 0.339 1201 722 0.007086 0.004345 A10 3 2 2145 1.63 0.212 phoH b1020 "PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation" Regulatory function regulator; Central intermediary metabolism: Phosphorus compounds b1021 3248 4772 -1.47 -0.167 2109 2249 -1.07 -0.028 4010 2179 0.023662 0.013118 L2 4 2 2982 1.80 0.256 ycdP b1021 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1022 2048 2155 -1.05 -0.022 1115 1395 -1.25 -0.097 2101 1255 0.012399 0.007555 N2 4 2 2983 1.64 0.215 ycdQ b1022 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1023 1461 1526 -1.04 -0.019 1495 1301 1.15 0.060 1493 1398 0.008810 0.008419 P2 4 2 2984 1.05 0.020 ycdR b1023 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1024 2725 2472 1.10 0.042 1429 1536 -1.07 -0.031 2598 1483 0.015332 0.008928 B4 4 2 2985 1.72 0.235 ycdS b1024 putative outer membrane protein putative membrane protein putative membrane; Not classified b1025 1059 1258 -1.19 -0.075 443 643 -1.29 -0.109 1158 543 0.006835 0.003269 D4 4 2 2986 2.09 0.320 ycdT b1025 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1026 2240 1875 1.19 0.077 1156 995 1.16 0.065 2057 1076 0.012139 0.006477 C13 4 1 338 1.87 0.273 tra5_3 b1026 IS3 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1027 1644 1696 -1.03 -0.013 420 604 -1.21 -0.082 1670 512 0.009855 0.003082 F4 4 2 2987 3.20 0.505 b1027 b1027 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1028 3663 3030 1.21 0.082 2085 1916 1.09 0.037 3347 2001 0.019749 0.012044 H4 4 2 2988 1.64 0.215 b1028 b1028 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1029 2894 3202 -1.11 -0.044 3006 3058 -1.02 -0.007 3048 3032 0.017984 0.018254 J4 4 2 2989 -1.01 -0.006 ycdU b1029 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1030 512 560 -1.09 -0.039 527 456 1.05 0.022 536 491 0.003160 0.002959 L4 4 2 2990 1.05 0.023 b1030 b1030 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1031 1786 681 2.62 0.419 3546 2308 1.54 0.187 1234 2927 0.007279 0.017620 A19 2 2 1705 -2.42 -0.384 ycdV b1031 putative ribosomal protein Putative cell structure putative structure; Not classified b1033 1060 1172 -1.11 -0.044 1142 1124 1.02 0.007 1116 1133 0.006585 0.006820 B7 2 2 2425 -1.04 -0.015 ycdW b1033 putative dehydrogenase Putative enzymes putative enzyme; Not classified b1034 1003 971 1.03 0.014 1348 1230 1.10 0.040 987 1289 0.005824 0.007761 N4 4 2 2991 -1.33 -0.125 ycdX b1034 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1035 1475 1041 1.42 0.151 1468 1529 -1.04 -0.018 1258 1498 0.007423 0.009020 P4 4 2 2992 -1.22 -0.085 ycdY b1035 putative oxidoreductase component Putative enzymes putative enzyme; Not classified b1036 2481 2761 -1.11 -0.046 771 883 -1.15 -0.059 2621 827 0.015465 0.004981 B6 4 2 2993 3.10 0.492 ycdZ b1036 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1037 1697 1528 1.11 0.046 695 690 1.01 0.003 1613 693 0.009516 0.004171 C18 1 1 450 2.28 0.358 csgG b1037 "curli production assembly/transport component, 2nd curli operon" Cell structure structural component; Surface structures b1038 454 231 1.00 0.000 161 94 1.00 0.000 343 127 0.002021 0.000766 E18 1 1 451 1.00 0.000 csgF b1038 "curli production assembly/transport component, 2nd curli operon" Cell structure structural component; Surface structures b1039 1374 921 1.49 0.174 843 991 -1.18 -0.070 1148 917 0.006773 0.005521 G18 1 1 452 1.23 0.089 csgE b1039 "curli production assembly/transport component, 2nd curli operon" Cell structure structural component; Surface structures b1040 1495 1668 -1.12 -0.048 554 593 -1.07 -0.029 1581 574 0.009332 0.003455 I18 1 1 453 2.70 0.431 csgD b1040 putative 2-component transcriptional regulator for 2nd curli operon Putative regulatory proteins putative regulator; Not classified b1041 153 119 1.00 0.000 120 191 -1.00 0.000 136 155 0.000800 0.000935 K18 1 1 454 -1.00 0.000 csgB b1041 "minor curlin subunit precursor, similar ro CsgA" Cell structure structural component; Surface structures b1042 878 677 1.30 0.113 806 484 1.61 0.207 778 645 0.004588 0.003885 M18 1 1 455 1.18 0.072 csgA b1042 "curlin major subunit, coiled surface structures; cryptic" Regulatory function regulator; Surface structures b1043 2131 2140 -1.00 -0.002 1894 2079 -1.10 -0.040 2136 1986 0.012601 0.011959 D6 4 2 2994 1.05 0.023 csgC b1043 putative curli production protein Putative cell structure putative structure; Not classified b1044 1171 1405 -1.20 -0.079 772 708 1.09 0.037 1288 740 0.007601 0.004458 F6 4 2 2995 1.71 0.232 b1044 b1044 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1045 1808 3273 -1.81 -0.258 1792 1716 1.04 0.019 2541 1754 0.014991 0.010559 H6 4 2 2996 1.42 0.152 b1045 b1045 putative polyprotein "Hypothetical, unclassified, unknown" orf; Unknown function b1046 3544 4016 -1.13 -0.054 3060 3414 -1.12 -0.048 3780 3237 0.022303 0.019489 J6 4 2 2997 1.14 0.059 ymdC b1046 putative synthase Putative enzymes putative enzyme; Not classified b1047 5447 6239 -1.15 -0.059 5776 6106 -1.06 -0.024 5843 5941 0.034479 0.035766 L6 4 2 2998 -1.04 -0.016 ymdD b1047 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1048 1170 1158 1.01 0.004 911 1129 -1.24 -0.093 1164 1020 0.006867 0.006142 L15 4 1 1118 1.12 0.048 mdoG b1048 periplasmic glucans biosynthesis protein Cell processes enzyme; Osmotic adaptation b1049 516 415 1.03 0.014 468 483 -1.00 0.000 465 475 0.002746 0.002862 N15 4 1 1119 -1.00 0.000 mdoH b1049 membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO) Cell processes enzyme; Osmotic adaptation b1050 1256 1588 -1.26 -0.102 319 358 -1.00 0.000 1422 338 0.008392 0.002037 N6 4 2 2999 2.80 0.447 yceK b1050 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1051 21466 20197 1.06 0.026 2854 3088 -1.08 -0.034 20831 2971 0.122920 0.017888 K8 4 1 702 6.87 0.837 msyB b1051 acidic protein suppresses mutants lacking function of protein export Cell processes "phenotype; Protein, peptide secretion" b1052 367 431 -1.00 0.000 1465 1446 1.01 0.006 399 1456 0.002354 0.008764 P6 4 2 3000 -2.92 -0.466 b1052 b1052 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1053 400 692 -1.38 -0.141 485 501 -1.00 -0.001 546 493 0.003219 0.002969 B8 4 2 3001 1.07 0.031 yceE b1053 putative transport protein Putative transport proteins putative transport; Not classified b1054 999 912 1.10 0.039 352 594 -1.19 -0.075 956 473 0.005639 0.002847 P15 4 1 1120 1.88 0.274 htrB b1054 heat shock protein Cell processes "factor; Adaptations, atypical conditions" b1055 1497 1500 -1.00 -0.001 1108 1300 -1.17 -0.069 1499 1204 0.008843 0.007247 D8 4 2 3002 1.22 0.086 yceA b1055 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1056 7055 6200 1.14 0.056 4659 4527 1.03 0.012 6628 4593 0.039108 0.027651 F8 4 2 3003 1.41 0.151 yceI b1056 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1057 2921 3383 -1.16 -0.064 1645 2376 -1.44 -0.160 3152 2011 0.018599 0.012106 H8 4 2 3004 1.54 0.187 b1057 b1057 putative cytochrome Putative enzymes putative enzyme; Not classified b1058 1288 1542 -1.20 -0.078 943 1066 -1.13 -0.054 1415 1005 0.008351 0.006048 J8 4 2 3005 1.38 0.140 yceO b1058 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1059 715 1451 -2.03 -0.308 1153 1176 -1.02 -0.008 1083 1165 0.006390 0.007011 D7 2 2 2426 -1.10 -0.040 solA b1059 sarcosine oxidase-like protein Putative enzymes putative enzyme; Not classified b1060 2673 2727 -1.02 -0.009 2285 2345 -1.03 -0.011 2700 2315 0.015932 0.013938 L8 4 2 3006 1.14 0.058 yceP b1060 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1061 2725 3626 -1.33 -0.124 2652 2891 -1.09 -0.038 3175 2772 0.018736 0.016687 J11 4 2 2637 1.12 0.050 dinI b1061 damage-inducible protein I Cell processes phenotype; Not classified b1062 3374 3275 1.03 0.013 2781 2434 1.14 0.058 3325 2607 0.019618 0.015698 M20 1 2 1999 1.25 0.097 pyrC b1062 dihydro-orotase Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b1063 1137 1659 -1.46 -0.164 588 1164 -1.98 -0.297 1398 876 0.008248 0.005273 N8 4 2 3007 1.56 0.194 yceB b1063 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1064 1752 1939 -1.11 -0.044 600 529 1.13 0.054 1845 565 0.010888 0.003399 H3 1 2 2316 3.20 0.506 grxB b1064 glutaredoxin 2 "Biosynthesis of cofactors, prosthetic groups and carriers" "carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b1065 225 442 -1.00 0.000 645 631 1.02 0.010 333 638 0.001967 0.003842 P8 4 2 3008 -1.28 -0.107 yceL b1065 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1066 22302 18405 1.21 0.083 17657 20024 -1.13 -0.055 20353 18841 0.120099 0.113431 C19 2 2 1706 1.06 0.025 rimJ b1066 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 "Translation, post-translational modification" enzyme; Ribosomes - maturation and modification b1067 8979 8403 1.07 0.029 8201 8180 1.00 0.001 8691 8190 0.051282 0.049311 B10 4 2 3009 1.04 0.017 yceH b1067 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1068 1835 2198 -1.20 -0.078 1407 1488 -1.06 -0.024 2016 1447 0.011898 0.008714 B17 4 1 1121 1.37 0.135 mviM b1068 putative virulence factor Putative factors putative factor; Not classified b1069 1644 1710 -1.04 -0.017 1334 1761 -1.32 -0.121 1677 1547 0.009894 0.009315 D17 4 1 1122 1.06 0.026 mviN b1069 putative virulence factor Putative factors putative factor; Not classified b1070 3847 3972 -1.03 -0.014 2814 3257 -1.16 -0.063 3910 3035 0.023069 0.018274 F17 4 1 1123 1.26 0.101 flgN b1070 protein of flagellar biosynthesis Cell processes phenotype; Surface structures b1071 3585 3854 -1.08 -0.031 3123 3702 -1.19 -0.074 3720 3412 0.021950 0.020544 H17 4 1 1124 1.07 0.029 flgM b1071 anti-FliA (anti-sigma) factor; also known as RflB protein Regulatory function factor; Surface structures b1072 1705 2180 -1.28 -0.107 1257 1313 -1.04 -0.019 1942 1285 0.011462 0.007737 J17 4 1 1125 1.48 0.171 flgA b1072 flagellar biosynthesis; assembly of basal-body periplasmic P ring Cell processes putative structure; Surface structures b1073 554 602 -1.09 -0.036 866 666 1.30 0.114 578 766 0.003410 0.004613 L17 4 1 1126 -1.35 -0.131 flgB b1073 "flagellar biosynthesis, cell-proximal portion of basal-body rod" Cell processes structural component; Surface structures b1074 132 255 -1.00 0.000 118 121 -1.00 0.000 193 119 0.001141 0.000717 N17 4 1 1127 1.00 0.000 flgC b1074 "flagellar biosynthesis, cell-proximal portion of basal-body rod" Cell processes structural component; Surface structures b1075 450 359 1.00 0.000 93 279 -1.00 0.000 404 186 0.002385 0.001117 P17 4 1 1128 1.00 0.000 flgD b1075 "flagellar biosynthesis, initiation of hook assembly" Cell processes putative structure; Surface structures b1076 7055 6954 1.01 0.006 3708 4277 -1.15 -0.062 7004 3993 0.041331 0.024039 B19 4 1 1129 1.72 0.235 flgE b1076 "flagellar biosynthesis, hook protein" Cell processes structural component; Surface structures b1077 369 536 -1.07 -0.030 423 463 -1.00 0.000 453 443 0.002672 0.002666 D19 4 1 1130 1.00 0.000 flgF b1077 "flagellar biosynthesis, cell-proximal portion of basal-body rod" Cell processes structural component; Surface structures b1078 1085 1372 -1.27 -0.102 987 1125 -1.14 -0.057 1228 1056 0.007248 0.006357 F19 4 1 1131 1.14 0.057 flgG b1078 "flagellar biosynthesis, cell-distal portion of basal-body rod" Cell processes structural component; Surface structures b1079 444 511 -1.02 -0.009 819 754 1.09 0.036 477 787 0.002815 0.004735 H19 4 1 1132 -1.58 -0.198 flgH b1079 "flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein" Cell processes structural component; Surface structures b1080 17516 15985 1.10 0.040 15194 18323 -1.21 -0.081 16751 16759 0.098840 0.100898 J19 4 1 1133 -1.02 -0.009 flgI b1080 homolog of Salmonella P-ring of flagella basal body Cell processes putative structure; Surface structures b1081 626 686 -1.10 -0.040 639 582 1.10 0.041 656 610 0.003869 0.003675 L19 4 1 1134 1.05 0.022 flgJ b1081 flagellar biosynthesis Cell processes putative structure; Surface structures b1082 491 465 1.00 0.000 400 400 -1.00 0.000 478 400 0.002821 0.002407 N19 4 1 1135 1.00 0.000 flgK b1082 "flagellar biosynthesis, hook-filament junction protein 1" Cell processes structural component; Surface structures b1083 765 792 -1.04 -0.015 106 559 -1.12 -0.048 779 333 0.004595 0.002002 P19 4 1 1136 1.53 0.185 flgL b1083 flagellar biosynthesis; hook-filament junction protein Cell processes structural component; Surface structures b1084 3011 4251 -1.41 -0.150 4080 5607 -1.37 -0.138 3631 4844 0.021426 0.029161 H22 4 1 1524 -1.36 -0.134 rne b1084 "RNase E, membrane attachment, mRNA turnover, maturation 5S RNA" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b1085 739 951 -1.29 -0.109 478 738 -1.48 -0.169 845 608 0.004987 0.003659 D10 4 2 3010 1.36 0.135 b1085 b1085 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1086 2578 2674 -1.04 -0.016 2330 2492 -1.07 -0.029 2626 2411 0.015496 0.014515 F10 4 2 3011 1.07 0.028 yceC b1086 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1087 8667 6716 1.29 0.111 5462 5492 -1.01 -0.002 7692 5477 0.045387 0.032973 H10 4 2 3012 1.38 0.139 yceF b1087 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1088 6886 6919 -1.00 -0.002 14562 16575 -1.14 -0.056 6903 15568 0.040730 0.093729 J10 4 2 3013 -2.30 -0.362 yceD b1088 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1089 15661 14763 1.06 0.026 18205 16905 1.08 0.032 15212 17555 0.089760 0.105691 E19 2 2 1707 -1.18 -0.071 rpmF b1089 50S ribosomal subunit protein L32 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b1090 2279 1941 1.17 0.070 2961 2839 1.04 0.018 2110 2900 0.012449 0.017460 M8 2 2 2047 -1.40 -0.147 plsX b1090 glycerolphosphate auxotrophy in plsB background Fatty acid and phospholipid metabolism "phenotype; Macromolecule synthesis, modification: Phospholipids" b1091 718 1206 -1.68 -0.225 3190 3842 -1.20 -0.081 962 3516 0.005679 0.021167 O8 2 2 2048 -3.73 -0.571 fabH b1091 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b1092 1917 1725 1.11 0.046 4970 4793 1.04 0.016 1821 4881 0.010745 0.029387 A10 2 2 2049 -2.74 -0.437 fabD b1092 malonyl-CoA-[acyl-carrier-protein] transacylase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b1093 7062 5521 1.28 0.107 11001 11503 -1.05 -0.019 6291 11252 0.037122 0.067743 C10 2 2 2050 -1.82 -0.261 fabG b1093 3-oxoacyl-[acyl-carrier-protein] reductase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b1094 11081 16930 -1.53 -0.184 28499 31282 -1.10 -0.040 14006 29890 0.082644 0.179956 E10 2 2 2051 -2.18 -0.338 acpP b1094 acyl carrier protein Fatty acid and phospholipid metabolism carrier; Fatty acid and phosphatidic acid biosynthesis b1095 1580 1532 1.03 0.013 5576 5921 -1.06 -0.026 1556 5748 0.009182 0.034608 G10 2 2 2052 -3.77 -0.576 fabF b1095 3-oxoacyl-[acyl-carrier-protein] synthase II Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b1096 1255 1021 1.23 0.090 1449 1431 1.01 0.005 1138 1440 0.006714 0.008668 J3 1 2 2317 -1.29 -0.111 pabC b1096 4-amino-4-deoxychorismate lyase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b1097 2123 1767 1.20 0.080 1404 1593 -1.13 -0.055 1945 1499 0.011476 0.009023 F7 2 2 2427 1.27 0.104 yceG b1097 putative thymidylate kinase (EC 2.7.4.9) Putative enzymes putative enzyme; Not classified b1098 18610 19450 -1.05 -0.019 19255 20070 -1.04 -0.018 19030 19662 0.112288 0.118376 O20 1 2 2000 -1.05 -0.023 tmk b1098 thymidylate kinase Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b1099 598 658 -1.10 -0.041 833 835 -1.00 -0.001 628 834 0.003706 0.005022 J22 4 1 1525 -1.36 -0.132 holB b1099 "DNA polymerase III, delta prime subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1100 1541 1708 -1.11 -0.045 1691 1871 -1.11 -0.044 1624 1781 0.009585 0.010723 L10 4 2 3014 -1.12 -0.049 ycfH b1100 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1101 598 588 1.02 0.007 409 389 1.00 0.000 593 399 0.003498 0.002404 M8 4 1 703 1.17 0.067 ptsG b1101 "PTS system, glucose-specific IIBC component" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1102 1342 1612 -1.20 -0.080 389 301 1.00 0.000 1477 345 0.008717 0.002075 O8 4 1 704 2.91 0.463 fhuE b1102 outer membrane receptor for ferric iron uptake Transport and binding proteins transport; Transport of small molecules: Cations b1103 1940 1773 1.09 0.039 1762 1581 1.11 0.047 1857 1672 0.010955 0.010064 N10 4 2 3015 1.09 0.037 ycfF b1103 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1104 747 641 1.17 0.066 492 370 1.00 0.000 694 431 0.004097 0.002594 P10 4 2 3016 1.37 0.135 ycfL b1104 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1105 4042 4257 -1.05 -0.023 2741 2766 -1.01 -0.004 4149 2754 0.024484 0.016578 B12 4 2 3017 1.48 0.169 ycfM b1105 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1106 11764 10790 1.09 0.038 5971 5499 1.09 0.036 11277 5735 0.066539 0.034528 E7 1 1 27 1.93 0.285 ycfN b1106 putative beta-glucosidase (EC 3.2.1.21) Putative enzymes putative enzyme; Not classified b1107 10670 13008 -1.22 -0.086 10384 14508 -1.40 -0.145 11839 12446 0.069857 0.074931 D12 4 2 3018 -1.07 -0.030 ycfO b1107 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1108 4939 5420 -1.10 -0.040 4254 3823 1.11 0.046 5180 4039 0.030563 0.024315 F12 4 2 3019 1.26 0.099 ycfP b1108 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1109 1807 2289 -1.27 -0.103 2645 2871 -1.09 -0.036 2048 2758 0.012086 0.016606 F18 2 1 1315 -1.37 -0.138 ndh b1109 respiratory NADH dehydrogenase Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b1110 6076 5360 1.13 0.054 3347 3139 1.07 0.028 5718 3243 0.033741 0.019525 H12 4 2 3020 1.73 0.238 ycfJ b1110 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1111 2686 2800 -1.04 -0.018 2221 2352 -1.06 -0.025 2743 2287 0.016186 0.013767 J12 4 2 3021 1.18 0.070 ycfQ b1111 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1112 1891 1662 1.14 0.056 1339 1157 1.16 0.064 1777 1248 0.010483 0.007514 L12 4 2 3022 1.40 0.145 ycfR b1112 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1113 2902 3159 -1.09 -0.037 2294 2351 -1.02 -0.011 3030 2323 0.017882 0.013985 N12 4 2 3023 1.28 0.107 ycfS b1113 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1114 205 218 -1.00 0.000 178 242 -1.00 0.000 211 210 0.001247 0.001264 L22 4 1 1526 -1.00 0.000 mfd b1114 transcription-repair coupling factor; mutation frequency decline "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b1115 1080 847 1.27 0.105 1829 1944 -1.06 -0.027 963 1887 0.005684 0.011359 P12 4 2 3024 -2.00 -0.301 ycfT b1115 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1116 4869 5209 -1.07 -0.029 3434 3754 -1.09 -0.039 5039 3594 0.029734 0.021638 B14 4 2 3025 1.37 0.138 ycfU b1116 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1117 58543 52197 1.12 0.050 28690 28285 1.01 0.006 55370 28488 0.326721 0.171511 D14 4 2 3026 1.90 0.280 ycfV b1117 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1118 1476 1575 -1.07 -0.028 1434 1593 -1.11 -0.046 1525 1514 0.009001 0.009113 H7 2 2 2428 -1.01 -0.005 ycfW b1118 putative kinase Putative enzymes putative enzyme; Not classified b1119 902 699 1.29 0.111 703 639 1.10 0.042 801 671 0.004724 0.004040 M3 3 1 207 1.17 0.068 ycfX b1119 putative NAGC-like transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1120 4268 4831 -1.13 -0.054 3128 3048 1.03 0.011 4550 3088 0.026846 0.018591 F14 4 2 3027 1.44 0.160 cobB b1120 "putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase" "Biosynthesis of cofactors, prosthetic groups and carriers" "putative enzyme; Biosynthesis of cofactors, carriers: Cobalamin" b1121 5987 5811 1.03 0.013 3171 2686 1.18 0.072 5899 2928 0.034809 0.017629 H14 4 2 3028 1.97 0.295 b1121 b1121 homolog of virulence factor Putative factors putative factor; Not classified b1122 11041 11438 -1.04 -0.015 5778 5512 1.05 0.020 11240 5645 0.066322 0.033984 J14 4 2 3029 1.95 0.290 ymfA b1122 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1123 18750 17038 1.10 0.042 15124 13815 1.09 0.039 17894 14469 0.105585 0.087113 A10 4 1 705 1.21 0.084 potD b1123 spermidine/putrescine periplasmic transport protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b1124 6591 7156 -1.09 -0.036 5690 6688 -1.18 -0.070 6873 6189 0.040557 0.037263 C10 4 1 706 1.09 0.037 potC b1124 spermidine/putrescine transport system permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b1125 2641 3315 -1.25 -0.099 1695 2660 -1.57 -0.196 2978 2178 0.017572 0.013111 E10 4 1 707 1.34 0.127 potB b1125 spermidine/putrescine transport system permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b1126 4710 4512 1.04 0.019 4284 3986 1.07 0.031 4611 4135 0.027209 0.024895 G10 4 1 708 1.09 0.039 potA b1126 ATP-binding component of spermidine/putrescine transport Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b1127 3252 3250 1.00 0.000 2249 3014 -1.34 -0.127 3251 2632 0.019183 0.015845 G19 2 2 1708 1.21 0.083 pepT b1127 putative peptidase T Putative enzymes putative enzyme; Not classified b1128 2526 2889 -1.14 -0.058 1662 1972 -1.19 -0.074 2707 1817 0.015976 0.010938 L14 4 2 3030 1.46 0.165 ycfD b1128 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1129 978 1055 -1.08 -0.033 697 840 -1.21 -0.081 1016 768 0.005997 0.004626 A11 2 1 137 1.30 0.113 phoQ b1129 sensor protein PhoQ Regulatory function enzyme; Global regulatory functions b1130 1207 1224 -1.01 -0.006 450 469 -1.00 0.000 1215 459 0.007172 0.002766 C11 2 1 138 2.39 0.379 phoP b1130 transcriptional regulatory protein Regulatory function regulator; Global regulatory functions b1131 4006 3145 1.27 0.105 5259 5172 1.02 0.007 3576 5215 0.021100 0.031400 A22 1 2 2001 -1.49 -0.173 purB b1131 adenylosuccinate lyase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b1132 2483 2490 -1.00 -0.001 1960 2103 -1.07 -0.030 2486 2031 0.014671 0.012230 N14 4 2 3031 1.20 0.079 ycfC b1132 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1133 1229 1288 -1.05 -0.021 2157 1988 1.08 0.035 1259 2073 0.007426 0.012478 P14 4 2 3032 -1.68 -0.225 ycfB b1133 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1134 436 439 -1.00 0.000 259 305 -1.00 0.000 437 282 0.002581 0.001695 J7 2 2 2429 1.00 0.000 b1134 b1134 putative phosphohydrolase Putative enzymes putative enzyme; Not classified b1135 4261 4761 -1.12 -0.048 3340 3681 -1.10 -0.042 4511 3511 0.026616 0.021136 B16 4 2 3033 1.26 0.100 ymfC b1135 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1136 11123 10576 1.05 0.022 3163 3470 -1.10 -0.040 10850 3317 0.064020 0.019968 H18 2 1 1316 3.21 0.506 icdA b1136 "isocitrate dehydrogenase, specific for NADP+" Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b1137 3175 4126 -1.30 -0.114 1720 1347 1.28 0.106 3651 1534 0.021543 0.009233 D16 4 2 3034 2.33 0.368 ymfD b1137 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1138 1911 1991 -1.04 -0.018 808 826 -1.02 -0.010 1951 817 0.011514 0.004920 F16 4 2 3035 2.34 0.369 ymfE b1138 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1139 157 192 -1.00 0.000 63 220 -1.00 0.000 175 142 0.001030 0.000853 E13 4 1 339 1.00 0.000 lit b1139 phage T4 late gene expression; at locus of e14 element "Phage, transposon, or plasmid" membrane; Phage-related functions and prophages b1140 7659 7824 -1.02 -0.009 1824 1848 -1.01 -0.006 7741 1836 0.045679 0.011053 G13 4 1 340 4.13 0.616 intE b1140 prophage e14 integrase "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b1141 10706 10337 1.04 0.015 7315 7925 -1.08 -0.035 10521 7620 0.062083 0.045878 H16 4 2 3036 1.35 0.131 b1141 b1141 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1142 2043 2324 -1.14 -0.056 1273 1061 1.20 0.079 2183 1167 0.012884 0.007025 J16 4 2 3037 1.83 0.263 ymfH b1142 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1143 2245 2645 -1.18 -0.071 1127 1067 1.06 0.024 2445 1097 0.014427 0.006605 L16 4 2 3038 2.18 0.339 ymfI b1143 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1144 138 423 -1.00 0.000 251 391 -1.00 0.000 280 321 0.001655 0.001931 N16 4 2 3039 -1.00 0.000 ymfJ b1144 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1145 911 920 -1.01 -0.004 524 595 -1.14 -0.056 915 559 0.005401 0.003368 I13 4 1 341 1.60 0.205 b1145 b1145 putative phage repressor "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b1146 572 800 -1.40 -0.146 353 564 -1.13 -0.053 686 459 0.004049 0.002761 P16 4 2 3040 1.35 0.130 b1146 b1146 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1147 1653 1859 -1.12 -0.051 661 882 -1.33 -0.125 1756 772 0.010360 0.004646 B18 4 2 3041 2.23 0.348 ymfL b1147 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1148 1654 1758 -1.06 -0.026 1279 1375 -1.08 -0.032 1706 1327 0.010067 0.007990 D18 4 2 3042 1.26 0.100 ymfM b1148 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1149 4479 3411 1.31 0.118 1983 2165 -1.09 -0.038 3945 2074 0.023276 0.012486 F18 4 2 3043 1.86 0.270 ymfN b1149 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1150 3111 3519 -1.13 -0.054 1906 1972 -1.04 -0.015 3315 1939 0.019559 0.011673 H18 4 2 3044 1.68 0.224 ymfR b1150 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1151 9544 8841 1.08 0.033 9832 10147 -1.03 -0.014 9192 9990 0.054240 0.060142 J18 4 2 3045 -1.11 -0.045 ymfO b1151 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1152 10236 7035 1.45 0.163 7338 7543 -1.03 -0.012 8636 7441 0.050957 0.044798 L18 4 2 3046 1.14 0.056 b1152 b1152 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1153 659 318 1.32 0.120 892 745 1.20 0.078 489 819 0.002883 0.004929 N18 4 2 3047 -1.64 -0.216 b1153 b1153 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1154 149 250 -1.00 0.000 40 139 -1.00 0.000 200 90 0.001178 0.000539 P18 4 2 3048 1.00 0.000 ycfK b1154 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1155 5644 5644 1.00 0.000 10125 10849 -1.07 -0.030 5644 10487 0.033303 0.063137 B20 4 2 3049 -1.90 -0.278 b1155 b1155 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1156 10279 12069 -1.17 -0.070 18457 18560 -1.01 -0.002 11174 18509 0.065937 0.111432 D20 4 2 3050 -1.69 -0.228 ycfA b1156 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1157 321 384 -1.00 0.000 143 108 1.00 0.000 352 125 0.002079 0.000754 K13 4 1 342 1.00 0.000 b1157 b1157 putative tail fiber protein "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b1158 161 308 -1.00 0.000 163 97 1.00 0.000 235 130 0.001385 0.000784 M13 4 1 343 1.00 0.000 pin b1158 inversion of adjacent DNA; at locus of e14 element "Phage, transposon, or plasmid" membrane; Phage-related functions and prophages b1159 1144 1051 1.09 0.037 1169 889 1.31 0.119 1098 1029 0.006476 0.006197 O21 1 2 1624 1.05 0.019 mcrA b1159 restriction of DNA at 5-methylcytosine residues; at locus of e14 element "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b1160 3134 3253 -1.04 -0.016 1679 1774 -1.06 -0.024 3194 1727 0.018844 0.010396 F20 4 2 3051 1.81 0.258 ycgW b1160 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1161 3605 3997 -1.11 -0.045 1985 2256 -1.14 -0.056 3801 2120 0.022427 0.012764 H20 4 2 3052 1.76 0.245 ycgX b1161 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1162 957 860 1.11 0.046 538 419 1.08 0.032 909 479 0.005362 0.002881 O3 3 1 208 1.79 0.252 ycgE b1162 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1163 1878 1942 -1.03 -0.015 1202 1291 -1.07 -0.031 1910 1247 0.011270 0.007505 J20 4 2 3053 1.50 0.177 b1163 b1163 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1164 382 117 1.00 0.000 64 115 -1.00 0.000 250 90 0.001473 0.000539 L20 4 2 3054 1.00 0.000 ycgZ b1164 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1165 208 257 -1.00 0.000 175 140 1.00 0.000 233 157 0.001373 0.000948 N20 4 2 3055 1.00 0.000 ymgA b1165 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1166 125 146 -1.00 0.000 125 241 -1.00 0.000 136 183 0.000800 0.001101 P20 4 2 3056 -1.00 0.000 ymgB b1166 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1167 931 1123 -1.21 -0.082 1100 1239 -1.13 -0.051 1027 1169 0.006061 0.007040 B22 4 2 3057 -1.16 -0.065 ymgC b1167 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1168 1101 1373 -1.25 -0.096 744 1064 -1.43 -0.155 1237 904 0.007301 0.005444 L7 2 2 2430 1.34 0.127 b1168 b1168 putative proteases Putative enzymes putative enzyme; Not classified b1169 558 173 1.12 0.048 502 420 1.00 0.002 366 461 0.002157 0.002776 D22 4 2 3058 -1.00 0.000 b1169 b1169 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1170 8166 8079 1.01 0.005 5403 5423 -1.00 -0.002 8122 5413 0.047928 0.032590 F22 4 2 3059 1.47 0.167 b1170 b1170 putative part of putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1171 1420 1407 1.01 0.004 855 1008 -1.18 -0.072 1414 931 0.008341 0.005608 H22 4 2 3060 1.49 0.172 b1171 b1171 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1172 782 1187 -1.52 -0.181 766 873 -1.14 -0.057 985 819 0.005810 0.004933 J22 4 2 3061 1.18 0.071 b1172 b1172 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1173 379 271 1.00 0.000 306 336 -1.00 0.000 325 321 0.001917 0.001934 L22 4 2 3062 -1.00 0.000 b1173 b1173 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1174 16542 13188 1.25 0.098 12231 12765 -1.04 -0.019 14865 12498 0.087714 0.075242 B21 4 1 1137 1.17 0.067 minE b1174 "cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation" Cell processes factor; Cell division b1175 5567 5636 -1.01 -0.005 3494 3789 -1.08 -0.035 5601 3642 0.033052 0.021925 D21 4 1 1138 1.51 0.178 minD b1175 "cell division inhibitor, a membrane ATPase, activates minC" Cell processes enzyme; Cell division b1176 2566 2521 1.02 0.008 1840 1903 -1.03 -0.015 2544 1871 0.015010 0.011267 F21 4 1 1139 1.33 0.125 minC b1176 "cell division inhibitor, inhibits ftsZ ring formation" Cell processes factor; Cell division b1177 339 482 -1.00 0.000 212 279 -1.00 0.000 410 245 0.002422 0.001478 N22 4 2 3063 1.00 0.000 ycgJ b1177 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1178 425 592 -1.18 -0.073 283 303 -1.00 0.000 509 293 0.003001 0.001762 P22 4 2 3064 1.00 0.000 ycgK b1178 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1179 2730 4001 -1.47 -0.166 4272 4581 -1.07 -0.030 3365 4426 0.019858 0.026649 B24 4 2 3065 -1.34 -0.128 ycgL b1179 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1180 675 892 -1.32 -0.121 577 824 -1.43 -0.155 783 701 0.004622 0.004218 N7 2 2 2431 1.10 0.040 b1180 b1180 putative isomerase Putative enzymes putative enzyme; Not classified b1181 5695 7070 -1.24 -0.094 5502 5937 -1.08 -0.033 6382 5719 0.037659 0.034434 D24 4 2 3066 1.09 0.039 ycgN b1181 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1182 712 614 1.16 0.064 468 497 -1.00 0.000 663 483 0.003912 0.002905 F24 4 2 3067 1.30 0.115 hlyE b1182 hemolysin E "Hypothetical, unclassified, unknown" phenotype; Not classified b1183 80 135 -1.00 0.000 81 25 1.00 0.000 107 53 0.000632 0.000320 N22 4 1 1527 1.00 0.000 umuD b1183 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC "DNA replication, repair, restriction/modification" "putative enzyme; DNA - replication, repair, restriction/modification" b1184 685 310 1.37 0.137 461 229 1.00 0.000 498 345 0.002937 0.002078 P22 4 1 1528 1.00 0.000 umuC b1184 SOS mutagenesis and repair "DNA replication, repair, restriction/modification" "putative enzyme; DNA - replication, repair, restriction/modification" b1185 307 333 -1.00 0.000 1231 1139 1.08 0.034 320 1185 0.001888 0.007135 O18 1 1 456 -2.38 -0.376 dsbB b1185 reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. Cell structure enzyme; Surface structures b1186 2830 2699 1.05 0.021 1498 1525 -1.02 -0.008 2765 1512 0.016315 0.009101 I10 4 1 709 1.79 0.254 nhaB b1186 "Na+/H+ antiporter, pH independent" Transport and binding proteins transport; Transport of small molecules: Cations b1187 -359 1087 -2.17 -0.337 2377 2195 1.08 0.035 364 2286 0.002146 0.013764 I10 2 2 2053 -4.59 -0.662 fadR b1187 "negative regulator for fad regulon, and positive activator of fabA" Regulatory function regulator; Degradation of small molecules: Fatty acids b1188 4377 4982 -1.14 -0.056 1962 1768 1.11 0.045 4679 1865 0.027611 0.011230 H24 4 2 3068 2.46 0.391 ycgB b1188 putative sporulation protein Putative factors putative factor; Not classified b1189 1199 1435 -1.20 -0.078 1384 1399 -1.01 -0.005 1317 1392 0.007771 0.008378 A15 4 2 1881 -1.08 -0.033 dadA b1189 D-amino acid dehydrogenase subunit Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b1190 820 626 1.31 0.117 1512 1422 1.06 0.027 723 1467 0.004264 0.008833 C15 4 2 1882 -2.07 -0.316 dadX b1190 "alanine racemase 2, catabolic" Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b1191 133958 136269 -1.02 -0.007 207609 219791 -1.06 -0.025 135114 213700 0.797265 1.286591 J24 4 2 3069 -1.61 -0.208 b1191 b1191 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1192 680 475 1.36 0.134 697 733 -1.05 -0.022 578 715 0.003409 0.004305 L24 4 2 3070 -1.26 -0.101 b1192 b1192 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1193 7090 8606 -1.21 -0.084 6293 5875 1.07 0.030 7848 6084 0.046308 0.036627 N24 4 2 3071 1.26 0.102 mltE b1193 murein transglycosylase E Cell structure "enzyme; Murein sacculus, peptidoglycan" b1194 4847 4913 -1.01 -0.006 4232 4051 1.04 0.019 4880 4142 0.028795 0.024936 P8 2 3 3072 1.15 0.062 ycgR b1194 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1195 304 340 -1.00 0.000 187 376 -1.00 0.000 322 282 0.001902 0.001695 B10 2 3 3073 1.00 0.000 ymgE b1195 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1196 458 311 1.00 0.000 300 487 -1.00 0.000 385 393 0.002269 0.002368 C1 1 3 3074 -1.00 0.000 ycgY b1196 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1197 10105 6742 1.50 0.176 6979 6710 1.04 0.017 8424 6844 0.049707 0.041207 H21 4 1 1140 1.21 0.081 treA b1197 "trehalase, periplasmic" Cell processes enzyme; Osmotic adaptation b1198 807 715 1.13 0.053 972 897 1.08 0.035 761 935 0.004490 0.005627 P7 2 2 2432 -1.25 -0.098 ycgC b1198 putative PTS system enzyme I Putative transport proteins putative transport; Not classified b1199 1048 867 1.21 0.083 608 937 -1.54 -0.188 957 773 0.005650 0.004652 B9 2 2 2433 1.21 0.084 b1199 b1199 putative dihydroxyacetone kinase (EC 2.7.1.2) Putative enzymes putative enzyme; Not classified b1200 195 365 -1.00 0.000 511 879 -1.72 -0.236 280 695 0.001650 0.004185 D9 2 2 2434 -1.39 -0.145 b1200 b1200 putative dihydroxyacetone kinase (EC 2.7.1.2) Putative enzymes putative enzyme; Not classified b1201 6804 5357 1.27 0.104 6333 6728 -1.06 -0.026 6081 6530 0.035879 0.039317 A5 3 1 209 -1.10 -0.040 b1201 b1201 putative sensor-type regulator Putative regulatory proteins putative regulator; Not classified b1202 133 28 1.00 0.000 -10 82 -1.00 0.000 80 36 0.000475 0.000216 I2 3 1 581 1.00 0.000 b1202 b1202 putative adhesion and penetration protein Putative factors putative factor; Not classified b1203 957 823 1.16 0.066 3373 3191 1.06 0.024 890 3282 0.005252 0.019759 E1 1 3 3075 -3.76 -0.575 ychF b1203 putative GTP-binding protein "Hypothetical, unclassified, unknown" phenotype; Not classified b1204 89 338 -1.00 0.000 239 637 -1.27 -0.105 213 438 0.001260 0.002637 I19 2 2 1709 -1.00 0.000 pth b1204 peptidyl-tRNA hydrolase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1205 548 452 1.10 0.040 433 369 1.00 0.000 500 401 0.002952 0.002413 G1 1 3 3076 1.00 0.000 ychH b1205 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1206 8399 10845 -1.29 -0.111 20224 21587 -1.07 -0.028 9622 20906 0.056774 0.125863 I1 1 3 3077 -2.22 -0.346 ychM b1206 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1207 2275 1895 1.20 0.079 5984 6127 -1.02 -0.010 2085 6055 0.012305 0.036456 C22 1 2 2002 -2.96 -0.472 prsA b1207 phosphoribosylpyrophosphate synthetase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b1208 1688 1883 -1.12 -0.047 2689 2538 1.06 0.025 1785 2613 0.010535 0.015732 K1 1 3 3078 -1.49 -0.174 ychB b1208 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1209 1727 1290 1.34 0.127 1157 779 1.49 0.172 1509 968 0.008901 0.005830 L3 1 2 2318 1.53 0.184 hemM b1209 "an enzyme in main pathway of synthesis of 5-aminolevulinate, possibly glutamyl-tRNA dehydrogenase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b1210 397 429 -1.00 0.000 576 458 1.15 0.062 413 517 0.002436 0.003115 N3 1 2 2319 -1.04 -0.016 hemA b1210 enzyme in alternate path of synthesis of 5-aminolevulinate "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b1211 2667 3106 -1.16 -0.066 2262 2613 -1.15 -0.063 2887 2438 0.017034 0.014675 K19 2 2 1710 1.16 0.065 prfA b1211 peptide chain release factor RF-1 "Translation, post-translational modification" factor; Proteins - translation and modification b1212 304 302 1.00 0.000 258 130 1.00 0.000 303 194 0.001788 0.001168 P3 1 2 2320 1.00 0.000 hemK b1212 possible protoporphyrinogen oxidase "Biosynthesis of cofactors, prosthetic groups and carriers" "putative enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b1213 263 93 1.00 0.000 127 182 -1.00 0.000 178 155 0.001050 0.000932 M1 1 3 3079 1.00 0.000 b1213 b1213 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1214 1326 1229 1.08 0.033 1547 1607 -1.04 -0.016 1277 1577 0.007537 0.009495 O1 1 3 3080 -1.26 -0.100 ychA b1214 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1215 1950 1865 1.05 0.019 1868 1858 1.01 0.002 1907 1863 0.011256 0.011217 A20 1 1 457 1.00 0.001 kdsA b1215 2-dehydro-3-deoxyphosphooctulonate aldolase Cell structure enzyme; Surface polysaccharides & antigens b1216 549 579 -1.05 -0.023 590 481 1.18 0.072 564 536 0.003327 0.003226 K10 4 1 710 1.03 0.013 chaA b1216 sodium-calcium/proton antiporter Transport and binding proteins transport; Transport of small molecules: Cations b1217 444 391 1.00 0.000 180 185 -1.00 0.000 418 182 0.002464 0.001099 M10 4 1 711 1.00 0.000 chaB b1217 cation transport regulator Regulatory function regulator; Transport of small molecules: Cations b1218 639 876 -1.37 -0.137 357 365 -1.00 0.000 758 361 0.004472 0.002174 O10 4 1 712 1.49 0.173 chaC b1218 cation transport regulator Transport and binding proteins transport; Transport of small molecules: Cations b1219 1320 1215 1.09 0.036 1255 1609 -1.28 -0.108 1268 1432 0.007479 0.008621 A3 1 3 3081 -1.15 -0.062 ychN b1219 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1220 4073 3742 1.09 0.037 3067 2930 1.05 0.020 3908 2999 0.023059 0.018053 M6 3 1 599 1.28 0.106 ychP b1220 putative factor Putative factors putative factor; Not classified b1221 1193 1650 -1.38 -0.141 907 1156 -1.27 -0.105 1422 1032 0.008388 0.006211 J18 2 1 1317 1.35 0.130 narL b1221 "pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes" Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b1222 723 1284 -1.78 -0.250 754 863 -1.15 -0.059 1003 809 0.005919 0.004869 L18 2 1 1318 1.22 0.085 narX b1222 "nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1223 10934 11042 -1.01 -0.004 8764 7755 1.13 0.053 10988 8260 0.064837 0.049727 A12 4 1 713 1.30 0.115 narK b1223 nitrite extrusion protein Transport and binding proteins transport; Transport of small molecules: Anions b1224 3995 4006 -1.00 -0.001 1690 1597 1.06 0.025 4001 1644 0.023607 0.009895 N18 2 1 1319 2.39 0.378 narG b1224 "nitrate reductase 1, alpha subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1225 2987 4393 -1.47 -0.168 2124 2337 -1.10 -0.041 3690 2230 0.021773 0.013427 P18 2 1 1320 1.62 0.210 narH b1225 "nitrate reductase 1, beta subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1226 9379 8338 1.12 0.051 15255 16472 -1.08 -0.033 8859 15864 0.052272 0.095507 B20 2 1 1321 -1.83 -0.262 narJ b1226 "nitrate reductase 1, delta subunit, assembly function" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1227 752 833 -1.11 -0.044 1354 1457 -1.08 -0.032 793 1405 0.004677 0.008462 D20 2 1 1322 -1.81 -0.257 narI b1227 "nitrate reductase 1, cytochrome b(NR), gamma subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1228 89 51 1.00 0.000 35 48 -1.00 0.000 70 42 0.000413 0.000251 C3 1 3 3082 1.00 0.000 b1228 b1228 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1229 12 66 -1.00 0.000 98 5 1.00 0.000 39 51 0.000228 0.000310 B24 4 1 1529 -1.00 0.000 tpr b1229 a protaminelike protein "DNA replication, repair, restriction/modification" "factor; Basic proteins - synthesis, modification" b1232 1812 2304 -1.27 -0.104 1936 1684 1.15 0.061 2058 1810 0.012142 0.010895 E22 1 2 2003 1.11 0.047 purU b1232 formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b1233 468 350 1.00 0.000 309 232 1.00 0.000 409 270 0.002412 0.001626 E3 1 3 3083 1.00 0.000 ychJ b1233 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1234 2065 1853 1.11 0.047 1135 911 1.25 0.096 1959 1023 0.011558 0.006157 G3 1 3 3084 1.88 0.273 ychK b1234 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1235 5018 5281 -1.05 -0.022 4446 4564 -1.03 -0.011 5150 4505 0.030386 0.027123 D24 4 1 1530 1.12 0.049 hnr b1235 Hnr protein Regulatory function "regulator; Basic proteins - synthesis, modification" b1236 1678 1692 -1.01 -0.004 1151 1210 -1.05 -0.021 1685 1180 0.009943 0.007107 G7 1 1 28 1.40 0.146 galU b1236 glucose-1-phosphate uridylyltransferase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b1237 13538 11595 1.17 0.067 10164 9843 1.03 0.014 12566 10004 0.074151 0.060227 F24 4 1 1531 1.23 0.090 hns b1237 "DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator" Regulatory function "regulator; Basic proteins - synthesis, modification" b1238 1577 1023 1.54 0.188 982 1005 -1.02 -0.010 1300 993 0.007673 0.005981 G22 1 2 2004 1.28 0.108 tdk b1238 thymidine kinase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b1239 321 371 -1.00 0.000 252 377 -1.00 0.000 346 315 0.002044 0.001895 I3 1 3 3085 1.00 0.000 ychG b1239 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1240 10434 6639 1.57 0.196 7148 7453 -1.04 -0.018 8536 7300 0.050371 0.043951 K3 1 3 3086 1.15 0.059 b1240 b1240 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1241 6023 4730 1.27 0.105 3470 3843 -1.11 -0.044 5377 3657 0.031726 0.022015 F20 2 1 1323 1.44 0.159 adhE b1241 CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b1242 381 425 -1.00 0.000 396 465 -1.00 0.000 403 430 0.002380 0.002591 J21 2 1 949 -1.00 0.000 ychE b1242 putative channel protein Putative transport proteins putative transport; Not classified b1243 25135 21656 1.16 0.065 25457 27414 -1.08 -0.032 23395 26436 0.138048 0.159159 C12 4 1 714 -1.15 -0.062 oppA b1243 oligopeptide transport; periplasmic binding protein Transport and binding proteins "transport; Protein, peptide secretion" b1244 688 693 -1.01 -0.003 1334 1620 -1.21 -0.084 690 1477 0.004073 0.008894 E12 4 1 715 -2.18 -0.339 oppB b1244 oligopeptide transport permease protein Transport and binding proteins "transport; Protein, peptide secretion" b1245 981 965 1.02 0.007 2446 2664 -1.09 -0.037 973 2555 0.005743 0.015384 G12 4 1 716 -2.68 -0.428 oppC b1245 homolog of Salmonella oligopeptide transport permease protein Putative transport proteins putative transport; Not classified b1246 984 1019 -1.04 -0.015 2238 2376 -1.06 -0.026 1002 2307 0.005911 0.013890 I12 4 1 717 -2.35 -0.371 oppD b1246 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system Putative transport proteins putative transport; Not classified b1247 545 670 -1.23 -0.090 1113 1250 -1.12 -0.051 607 1181 0.003582 0.007113 K12 4 1 718 -1.99 -0.298 oppF b1247 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system Putative transport proteins putative transport; Not classified b1248 1006 1023 -1.02 -0.007 495 549 -1.10 -0.041 1014 522 0.005985 0.003143 M3 1 3 3087 1.90 0.280 b1248 b1248 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1249 505 673 -1.33 -0.124 351 583 -1.17 -0.067 589 467 0.003476 0.002812 K10 2 2 2054 1.16 0.064 cls b1249 "cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity" Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b1250 6178 7048 -1.14 -0.057 2895 3333 -1.15 -0.061 6613 3114 0.039020 0.018747 M12 4 1 719 2.08 0.318 kch b1250 putative potassium channel protein Putative transport proteins putative transport; Not classified b1251 1684 1516 1.11 0.045 870 921 -1.06 -0.025 1600 896 0.009441 0.005393 O3 1 3 3088 1.75 0.243 yciI b1251 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1252 1794 1430 1.25 0.098 556 761 -1.37 -0.136 1612 658 0.009512 0.003964 O12 4 1 720 2.40 0.380 tonB b1252 "energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins" Transport and binding proteins membrane; Transport of small molecules: Cations b1253 183 234 -1.00 0.000 657 678 -1.03 -0.013 209 667 0.001231 0.004018 A5 1 3 3089 -1.34 -0.127 yciA b1253 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1254 256 140 1.00 0.000 242 330 -1.00 0.000 198 286 0.001166 0.001721 C5 1 3 3090 -1.00 0.000 yciB b1254 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1255 524 186 1.05 0.020 418 386 1.00 0.000 355 402 0.002095 0.002420 E5 1 3 3091 -1.00 0.000 yciC b1255 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1256 2607 2362 1.10 0.043 1388 1468 -1.06 -0.024 2485 1428 0.014661 0.008597 C20 1 1 458 1.71 0.232 yciD b1256 putative outer membrane protein putative membrane protein putative membrane; Not classified b1257 10253 9419 1.09 0.037 4937 5064 -1.03 -0.011 9836 5000 0.058040 0.030105 G5 1 3 3092 1.93 0.285 yciE b1257 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1258 1810 1644 1.10 0.042 270 288 -1.00 0.000 1727 279 0.010189 0.001679 O6 3 1 600 3.40 0.531 yciF b1258 putative structural proteins Putative cell structure putative structure; Not classified b1259 2186 1708 1.28 0.107 926 899 1.03 0.013 1947 913 0.011488 0.005495 I5 1 3 3093 2.09 0.320 yciG b1259 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1260 6468 6367 1.02 0.007 1693 2467 -1.46 -0.164 6417 2080 0.037866 0.012524 E15 4 2 1883 3.02 0.481 trpA b1260 "tryptophan synthase, alpha protein" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tryptophan b1261 9171 9845 -1.07 -0.031 2779 2317 1.20 0.079 9508 2548 0.056105 0.015340 G15 4 2 1884 3.66 0.563 trpB b1261 "tryptophan synthase, beta protein" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tryptophan b1262 6839 7563 -1.11 -0.044 1981 2297 -1.16 -0.064 7201 2139 0.042493 0.012878 I15 4 2 1885 3.30 0.518 trpC b1262 N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tryptophan b1263 18146 19708 -1.09 -0.036 16586 16291 1.02 0.008 18927 16438 0.111682 0.098967 K15 4 2 1886 1.13 0.052 trpD b1263 "anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tryptophan b1264 5161 5478 -1.06 -0.026 1245 1970 -1.58 -0.199 5320 1607 0.031390 0.009678 M15 4 2 1887 3.24 0.511 trpE b1264 anthranilate synthase component I Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tryptophan b1265 377 390 -1.00 0.000 210 125 1.00 0.000 383 168 0.002262 0.001010 O15 4 2 1888 1.00 0.000 trpL b1265 trp operon leader peptide Amino acid biosynthesis leader; Amino acid biosynthesis: Tryptophan b1266 1700 1992 -1.17 -0.069 1302 1526 -1.17 -0.069 1846 1414 0.010893 0.008513 F9 2 2 2435 1.28 0.107 yciV b1266 putative enzymes Putative enzymes putative enzyme; Not classified b1267 598 449 1.20 0.078 442 625 -1.25 -0.097 523 534 0.003088 0.003213 K5 1 3 3094 -1.04 -0.017 yciO b1267 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1268 60633 58556 1.04 0.015 45228 48737 -1.08 -0.032 59594 46982 0.351649 0.282860 M5 1 3 3095 1.24 0.095 yciQ b1268 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1269 3186 2490 1.28 0.107 3560 4906 -1.38 -0.139 2838 4233 0.016744 0.025484 O5 1 3 3096 -1.52 -0.182 yciL b1269 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1270 1051 822 1.28 0.107 1315 1184 1.11 0.046 937 1250 0.005528 0.007524 B5 1 2 2321 -1.36 -0.134 btuR b1270 cob(I)alamin adenolsyltransferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Cobalamin" b1271 878 1935 -2.20 -0.343 518 1159 -2.24 -0.350 1406 838 0.008299 0.005047 H9 2 2 2436 1.64 0.216 yciK b1271 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1272 17171 16977 1.01 0.005 13273 14429 -1.09 -0.036 17074 13851 0.100750 0.083390 M19 2 2 1711 1.21 0.082 sohB b1272 putative protease Putative enzymes putative enzyme; Not classified b1273 197 215 -1.00 0.000 665 645 1.03 0.013 206 655 0.001216 0.003945 A7 1 3 3097 -1.32 -0.119 yciN b1273 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1274 3721 3999 -1.07 -0.031 3209 3209 1.00 0.000 3860 3209 0.022776 0.019320 H24 4 1 1532 1.18 0.071 topA b1274 "DNA topoisomerase type I, omega protein" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1275 855 855 1.00 0.000 847 1051 -1.24 -0.094 855 949 0.005044 0.005713 A17 4 2 1889 -1.13 -0.054 cysB b1275 positive transcriptional regulator for cysteine regulon Regulatory function transport; Amino acid biosynthesis: Cysteine b1276 1868 1674 1.12 0.047 600 814 -1.36 -0.133 1771 707 0.010450 0.004259 H20 2 1 1324 2.45 0.390 acnA b1276 aconitate hydrase 1 Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b1277 722 491 1.44 0.159 775 885 -1.14 -0.058 606 830 0.003578 0.004997 D5 1 2 2322 -1.40 -0.145 ribA b1277 GTP cyclohydrolase II "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Riboflavin" b1278 813 589 1.38 0.140 379 408 -1.00 0.000 701 394 0.004137 0.002371 M10 2 2 2055 1.38 0.140 pgpB b1278 "non-essential phosphatidylglycerophosphate phosphatase, membrane bound" Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b1279 111 162 -1.00 0.000 127 115 1.00 0.000 137 121 0.000806 0.000726 C7 1 3 3098 1.00 0.000 yciS b1279 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1280 424 492 -1.00 0.000 472 227 1.00 0.000 458 350 0.002703 0.002105 E7 1 3 3099 1.00 0.000 yciM b1280 putative heat shock protein Putative factors putative factor; Not classified b1281 530 477 1.06 0.025 801 909 -1.13 -0.055 503 855 0.002971 0.005148 I22 1 2 2005 -1.72 -0.234 pyrF b1281 orotidine-5'-phosphate decarboxylase Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b1282 832 650 1.28 0.108 610 504 1.21 0.083 741 557 0.004371 0.003354 G7 1 3 3100 1.30 0.115 yciH b1282 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1283 2322 2251 1.03 0.014 1029 1171 -1.14 -0.056 2286 1100 0.013491 0.006623 J21 4 1 1141 2.04 0.309 osmB b1283 osmotically inducible lipoprotein Cell processes putative membrane; Osmotic adaptation b1284 910 634 1.43 0.157 633 694 -1.10 -0.040 772 663 0.004555 0.003995 C5 3 1 210 1.14 0.057 b1284 b1284 putative DEOR-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1285 1167 1189 -1.02 -0.008 688 513 1.34 0.128 1178 601 0.006950 0.003617 I7 1 3 3101 1.92 0.284 yciR b1285 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1286 1418 1468 -1.04 -0.015 3228 3030 1.07 0.027 1443 3129 0.008514 0.018838 J24 4 1 1533 -2.21 -0.345 rnb b1286 "RNase II, mRNA degradation" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b1287 1298 1701 -1.31 -0.118 1133 1232 -1.09 -0.036 1499 1182 0.008848 0.007118 J9 2 2 2437 1.24 0.094 yciW b1287 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1288 2452 2745 -1.12 -0.049 7128 7822 -1.10 -0.040 2598 7475 0.015332 0.045004 O10 2 2 2056 -2.94 -0.468 fabI b1288 enoyl-[acyl-carrier-protein] reductase (NADH) Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b1289 930 915 1.02 0.007 901 1122 -1.24 -0.095 923 1012 0.005446 0.006091 K7 1 3 3102 -1.12 -0.049 ycjD b1289 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1290 1612 1422 1.13 0.055 1687 1826 -1.08 -0.035 1517 1756 0.008953 0.010575 A14 4 1 721 -1.18 -0.072 sapF b1290 putative ATP-binding protein of peptide transport system Putative transport proteins putative transport; Not classified b1291 8492 7371 1.15 0.062 7375 7357 1.00 0.001 7932 7366 0.046802 0.044347 C14 4 1 722 1.06 0.023 sapD b1291 putative ATP-binding protein of peptide transport system Putative transport proteins putative transport; Not classified b1292 6983 7141 -1.02 -0.010 2234 2391 -1.07 -0.029 7062 2312 0.041672 0.013922 E14 4 1 723 2.99 0.476 sapC b1292 homolog of Salmonella peptide transport permease protein Putative transport proteins putative transport; Not classified b1293 1334 1284 1.04 0.017 869 712 1.22 0.086 1309 791 0.007722 0.004759 G14 4 1 724 1.62 0.210 sapB b1293 homolog of Salmonella peptide transport permease protein Putative transport proteins putative transport; Not classified b1294 3793 3754 1.01 0.004 1664 1887 -1.13 -0.055 3774 1775 0.022267 0.010689 I14 4 1 725 2.08 0.319 sapA b1294 homolog of Salmonella peptide transport periplasmic protein Putative transport proteins putative transport; Not classified b1295 162 352 -1.00 0.000 420 421 -1.00 0.000 257 421 0.001515 0.002532 M7 1 3 3103 -1.00 0.000 ymjA b1295 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1296 5838 4691 1.24 0.095 3070 3679 -1.20 -0.079 5265 3374 0.031066 0.020315 L21 2 1 950 1.53 0.184 ycjJ b1296 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b1297 1372 1353 1.01 0.006 893 1028 -1.15 -0.061 1362 961 0.008040 0.005784 L9 2 2 2438 1.39 0.143 b1297 b1297 putative glutamine synthetase (EC 6.3.1.2) Putative enzymes putative enzyme; Not classified b1298 2901 1567 1.85 0.267 1596 1164 1.37 0.137 2234 1380 0.013183 0.008308 N9 2 2 2439 1.59 0.200 ycjL b1298 probable amidotransferase subunit Putative enzymes putative enzyme; Not classified b1299 2431 2374 1.02 0.010 3770 3602 1.05 0.020 2402 3686 0.014176 0.022190 O7 1 3 3104 -1.57 -0.195 ycjC b1299 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1300 1270 1495 -1.18 -0.071 1013 1554 -1.53 -0.186 1382 1284 0.008156 0.007729 J20 2 1 1325 1.06 0.023 aldH b1300 "aldehyde dehydrogenase, prefers NADP over NAD" Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b1301 2120 2212 -1.04 -0.019 1924 2153 -1.12 -0.049 2166 2039 0.012780 0.012273 P9 2 2 2440 1.04 0.018 ordL b1301 probable oxidoreductase Putative enzymes putative enzyme; Not classified b1302 2384 2150 1.11 0.045 1801 1042 1.73 0.237 2267 1421 0.013377 0.008558 C10 3 2 2146 1.56 0.194 goaG b1302 4-aminobutyrate aminotransferase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1303 257 250 1.00 0.000 72 178 -1.00 0.000 254 125 0.001496 0.000753 O13 4 1 344 1.00 0.000 pspF b1303 psp operon transcriptional activator Regulatory function regulator; Phage-related functions and prophages b1304 1323 1408 -1.06 -0.027 801 875 -1.09 -0.038 1366 838 0.008058 0.005044 A15 4 1 345 1.60 0.203 pspA b1304 "phage shock protein, inner membrane protein" "Phage, transposon, or plasmid" factor; Phage-related functions and prophages b1305 4927 4856 1.01 0.006 4702 4943 -1.05 -0.022 4892 4822 0.028865 0.029032 C15 4 1 346 -1.01 -0.003 pspB b1305 phage shock protein "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b1306 247 374 -1.00 0.000 121 216 -1.00 0.000 311 169 0.001834 0.001015 E15 4 1 347 1.00 0.000 pspC b1306 phage shock protein: activates phage shock-protein expression "Phage, transposon, or plasmid" factor; Phage-related functions and prophages b1307 788 768 1.03 0.011 543 482 1.09 0.036 778 512 0.004590 0.003085 G15 4 1 348 1.49 0.173 pspD b1307 phage shock protein "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b1308 2843 2388 1.19 0.076 1108 1204 -1.09 -0.036 2615 1156 0.015432 0.006961 I15 4 1 349 2.22 0.346 pspE b1308 phage shock protein "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b1309 1703 1566 1.09 0.036 1089 1734 -1.59 -0.202 1634 1412 0.009645 0.008498 B11 2 2 2441 1.13 0.055 ycjM b1309 putative polysaccharide hydrolase Putative enzymes putative enzyme; Not classified b1310 966 757 1.28 0.106 363 406 -1.00 0.000 861 384 0.005082 0.002315 A9 1 3 3105 1.69 0.229 b1310 b1310 putative transport periplasmic protein Putative transport proteins putative transport; Not classified b1311 736 462 1.47 0.168 384 379 1.00 0.000 599 382 0.003535 0.002297 N21 2 1 951 1.18 0.071 ycjO b1311 putative binding-protein dependent transport protein Putative transport proteins putative transport; Not classified b1312 13931 13758 1.01 0.005 7760 8761 -1.13 -0.053 13845 8260 0.081693 0.049733 P21 2 1 952 1.64 0.216 ycjP b1312 putative transport system permease protein Putative transport proteins putative transport; Not classified b1313 1821 1557 1.17 0.068 3018 3089 -1.02 -0.010 1689 3054 0.009966 0.018384 D11 2 2 2442 -1.84 -0.266 ycjQ b1313 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1314 1183 1196 -1.01 -0.005 1545 1362 1.13 0.055 1189 1453 0.007017 0.008751 E5 3 1 211 -1.25 -0.096 b1314 b1314 putative transient receptor potential locus Putative factors putative factor; Not classified b1315 1311 1810 -1.38 -0.140 1879 2388 -1.27 -0.104 1561 2134 0.009210 0.012847 F11 2 2 2443 -1.39 -0.145 ycjS b1315 putative dehydrogenase Putative enzymes putative enzyme; Not classified b1316 1552 1500 1.03 0.015 1775 2071 -1.17 -0.067 1526 1923 0.009005 0.011576 C9 1 3 3106 -1.29 -0.109 ycjT b1316 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1317 324 264 1.00 0.000 126 44 1.00 0.000 294 85 0.001735 0.000511 E9 1 3 3107 1.00 0.000 ycjU b1317 putative beta-phosphoglucomutase Putative enzymes putative enzyme; Not classified b1318 6902 7737 -1.12 -0.050 10871 10859 1.00 0.000 7320 10865 0.043190 0.065415 B23 2 1 953 -1.51 -0.180 ycjV b1318 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1319 321 149 1.00 0.000 282 330 -1.00 0.000 235 306 0.001385 0.001842 G9 1 3 3108 -1.00 0.000 ompG b1319 outer membrane protein Cell structure membrane; Outer membrane constituents b1320 266 1123 -2.25 -0.352 188 456 -1.00 0.000 695 322 0.004099 0.001936 E11 2 1 139 1.37 0.136 ycjW b1320 putative LACI-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1321 178 379 -1.00 0.000 166 270 -1.00 0.000 278 218 0.001641 0.001311 H11 2 2 2444 1.00 0.000 ycjX b1321 putative EC 2.1 enzymes Putative enzymes putative enzyme; Not classified b1322 520 472 1.04 0.017 411 435 -1.00 0.000 496 423 0.002928 0.002547 I9 1 3 3109 1.00 0.000 ycjF b1322 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1323 1560 1621 -1.04 -0.017 972 1151 -1.18 -0.073 1590 1062 0.009385 0.006392 K14 4 1 726 1.47 0.167 tyrR b1323 "transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport" Regulatory function "regulator; Transport of small molecules: Amino acids, amines" b1324 8302 5830 1.42 0.153 7867 7808 1.01 0.003 7066 7838 0.041696 0.047187 L21 4 1 1142 -1.13 -0.054 tpx b1324 thiol peroxidase Cell processes enzyme; Detoxification b1325 878 996 -1.13 -0.054 720 686 1.05 0.021 937 703 0.005530 0.004234 J11 2 2 2445 1.31 0.116 ycjG b1325 putative muconate cycloisomerase I (EC 5.5.-.-) Putative enzymes putative enzyme; Not classified b1326 1412 1285 1.10 0.041 1019 1292 -1.27 -0.103 1349 1155 0.007959 0.006956 L11 2 2 2446 1.14 0.058 ycjI b1326 putative carboxypeptidase Putative enzymes putative enzyme; Not classified b1327 357 464 -1.00 0.000 358 481 -1.00 0.000 410 419 0.002422 0.002525 K9 1 3 3110 -1.00 0.000 b1327 b1327 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1328 493 410 1.00 0.000 255 313 -1.00 0.000 451 284 0.002664 0.001712 G5 3 1 212 1.00 0.000 ycjZ b1328 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b1329 595 538 1.11 0.044 350 442 -1.00 0.000 566 396 0.003342 0.002383 M14 4 1 727 1.11 0.047 b1329 b1329 putative transport periplasmic protein Putative transport proteins putative transport; Not classified b1330 2474 1948 1.27 0.104 2913 2704 1.08 0.032 2211 2809 0.013047 0.016909 M9 1 3 3111 -1.30 -0.113 b1330 b1330 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1331 4424 3981 1.11 0.046 5671 5866 -1.03 -0.015 4203 5769 0.024799 0.034732 K15 4 1 350 -1.40 -0.146 trs5_4 b1331 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1332 4854 5097 -1.05 -0.021 5419 5048 1.07 0.031 4976 5234 0.029360 0.031509 O9 1 3 3112 -1.07 -0.031 ynaJ b1332 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1333 383 470 -1.00 0.000 493 409 1.00 0.000 427 451 0.002517 0.002715 A11 1 3 3113 -1.00 0.000 ydaA b1333 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1334 565 355 1.13 0.053 307 327 -1.00 0.000 460 317 0.002714 0.001908 G11 2 1 140 1.00 0.000 fnr b1334 "transcriptional regulation of aerobic, anaerobic respiration, osmotic balance" Regulatory function regulator; Global regulatory functions b1335 214 306 -1.00 0.000 286 272 1.00 0.000 260 279 0.001534 0.001679 L24 4 1 1534 -1.00 0.000 ogt b1335 O-6-alkylguanine-DNA/cysteine-protein methyltransferase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1336 737 868 -1.18 -0.071 689 895 -1.30 -0.113 802 792 0.004735 0.004768 D23 2 1 954 -1.01 -0.003 ydaH b1336 putative pump protein (transport) Putative transport proteins putative transport; Not classified b1337 538 526 1.02 0.010 766 684 1.12 0.049 532 725 0.003141 0.004366 C11 1 3 3114 -1.39 -0.143 b1337 b1337 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1338 2021 2435 -1.20 -0.081 1568 1598 -1.02 -0.008 2228 1583 0.013147 0.009532 N11 2 2 2447 1.38 0.140 ydaJ b1338 putative aminohydrolase (EC 3.5.1.14) Putative enzymes putative enzyme; Not classified b1339 1871 1396 1.34 0.127 705 676 1.04 0.018 1633 691 0.009639 0.004158 I5 3 1 213 2.32 0.365 ydaK b1339 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b1340 393 287 1.00 0.000 319 249 1.00 0.000 340 284 0.002007 0.001709 E11 1 3 3115 1.00 0.000 ydaL b1340 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1341 282 416 -1.00 0.000 186 228 -1.00 0.000 349 207 0.002059 0.001245 G11 1 3 3116 1.00 0.000 b1341 b1341 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1342 640 369 1.28 0.107 492 458 1.00 0.000 505 475 0.002979 0.002859 I11 1 3 3117 1.00 0.000 b1342 b1342 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1343 1562 1465 1.07 0.028 1549 1738 -1.12 -0.050 1513 1644 0.008930 0.009897 A23 1 2 1625 -1.11 -0.045 dbpA b1343 ATP-dependent RNA helicase "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b1344 876 732 1.20 0.078 391 504 -1.01 -0.003 804 447 0.004743 0.002693 K11 1 3 3118 1.58 0.199 ydaO b1344 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1345 426 362 1.00 0.000 184 311 -1.00 0.000 394 247 0.002325 0.001489 M15 4 1 351 1.00 0.000 b1345 b1345 putative transposase "Phage, transposon, or plasmid" putative transport; Not classified b1346 505 467 1.01 0.004 649 544 1.19 0.077 486 596 0.002868 0.003591 M11 1 3 3119 -1.20 -0.078 ydaQ b1346 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1347 3522 3238 1.09 0.037 4979 5121 -1.03 -0.012 3380 5050 0.019944 0.030403 O11 1 3 3120 -1.52 -0.183 ydaC b1347 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1348 -25 91 -1.00 0.000 28 -1 1.00 0.000 33 14 0.000194 0.000083 N24 4 1 1535 1.00 0.000 lar b1348 restriction alleviation and modification enhancement "Phage, transposon, or plasmid" enzyme; Phage-related functions and prophages b1349 161 238 -1.00 0.000 160 148 1.00 0.000 199 154 0.001175 0.000926 P4 2 3 1536 1.00 0.000 recT b1349 "recombinase, DNA renaturation" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1350 449 310 1.00 0.000 139 140 -1.00 0.000 379 139 0.002239 0.000837 C23 1 2 1626 1.00 0.000 recE b1350 "exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b1351 83 67 1.00 0.000 73 96 -1.00 0.000 75 85 0.000443 0.000511 O15 4 1 352 -1.00 0.000 racC b1351 defective prophage rac; contains recE and oriJ "Phage, transposon, or plasmid" membrane; Phage-related functions and prophages b1352 311 345 -1.00 0.000 342 378 -1.00 0.000 328 360 0.001935 0.002167 A13 1 3 3121 -1.00 0.000 ydaD b1352 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1353 791 590 1.34 0.127 441 458 -1.00 0.000 690 449 0.004073 0.002706 A17 4 1 353 1.36 0.133 sieB b1353 phage superinfection exclusion protein "Phage, transposon, or plasmid" phenotype; Phage-related functions and prophages b1354 116 249 -1.00 0.000 220 192 1.00 0.000 182 206 0.001076 0.001240 C13 1 3 3122 -1.00 0.000 b1354 b1354 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1355 -6 89 -1.00 0.000 223 122 1.00 0.000 42 173 0.000247 0.001040 E13 1 3 3123 -1.00 0.000 b1355 b1355 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1356 905 611 1.48 0.170 364 335 1.00 0.000 758 350 0.004472 0.002105 G13 1 3 3124 1.49 0.173 ydaR b1356 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1357 241 124 1.00 0.000 86 91 -1.00 0.000 183 89 0.001078 0.000533 I13 1 3 3125 1.00 0.000 ydaS b1357 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1358 2 135 -1.00 0.000 245 144 1.00 0.000 68 195 0.000403 0.001172 K13 1 3 3126 -1.00 0.000 ydaT b1358 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1359 1139 680 1.67 0.224 2588 2677 -1.03 -0.015 910 2632 0.005368 0.015848 M13 1 3 3127 -2.95 -0.470 ydaU b1359 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1360 10541 10298 1.02 0.010 10912 10374 1.05 0.022 10420 10643 0.061483 0.064076 B6 2 3 1537 -1.04 -0.018 b1360 b1360 putative DNA replication factor Putative factors putative factor; Not classified b1361 2829 1816 1.56 0.193 6773 7202 -1.06 -0.027 2322 6987 0.013704 0.042067 O13 1 3 3128 -3.07 -0.487 ydaW b1361 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1362 227 283 -1.00 0.000 405 352 1.00 0.000 255 379 0.001504 0.002279 C17 4 1 354 -1.00 0.000 b1362 b1362 putative Rac prophage endopeptidase "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b1363 683 955 -1.40 -0.146 481 593 -1.19 -0.074 819 537 0.004831 0.003232 O14 4 1 728 1.50 0.175 trkG b1363 trk system potassium uptake; part of Rac prophage Transport and binding proteins transport; Transport of small molecules: Cations b1364 3319 2582 1.29 0.109 2711 2812 -1.04 -0.016 2951 2761 0.017410 0.016625 A15 1 3 3129 1.05 0.020 b1364 b1364 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1365 1883 1948 -1.03 -0.015 746 682 1.09 0.039 1915 714 0.011301 0.004300 C15 1 3 3130 2.63 0.420 b1365 b1365 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1366 2036 2384 -1.17 -0.068 803 1046 -1.30 -0.115 2210 925 0.013040 0.005568 E15 1 3 3131 2.34 0.370 ydaY b1366 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1367 211 176 1.00 0.000 89 38 1.00 0.000 194 63 0.001143 0.000382 G15 1 3 3132 1.00 0.000 b1367 b1367 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1368 371 471 -1.00 0.000 214 196 1.00 0.000 421 205 0.002483 0.001235 A8 3 1 601 1.00 0.000 b1368 b1368 putative alpha helix protein "Hypothetical, unclassified, unknown" orf; Not classified b1369 2889 2694 1.07 0.030 916 980 -1.07 -0.029 2791 948 0.016470 0.005707 I15 1 3 3133 2.89 0.460 b1369 b1369 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1370 3872 3878 -1.00 -0.001 4190 3897 1.08 0.031 3875 4043 0.022866 0.024341 E17 4 1 355 -1.06 -0.027 trs5_5 b1370 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1371 427 483 -1.00 0.000 707 728 -1.03 -0.013 455 718 0.002686 0.004321 K15 1 3 3134 -1.44 -0.158 b1371 b1371 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1372 101 -16 1.00 0.000 34 21 1.00 0.000 43 28 0.000252 0.000168 G17 4 1 356 1.00 0.000 b1372 b1372 putative membrane protein putative membrane protein putative membrane; Not classified b1373 2230 2306 -1.03 -0.015 1299 1190 1.09 0.038 2268 1245 0.013381 0.007495 M15 1 3 3135 1.79 0.252 ynaC b1373 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1374 325 402 -1.00 0.000 101 141 -1.00 0.000 364 121 0.002145 0.000728 I17 4 1 357 1.00 0.000 b1374 b1374 putative transposon resolvase "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b1375 1566 1333 1.17 0.070 1363 1378 -1.01 -0.005 1450 1371 0.008555 0.008252 O15 1 3 3136 1.04 0.016 ynaE b1375 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1376 1453 1233 1.18 0.071 920 903 1.02 0.008 1343 912 0.007924 0.005488 C8 3 1 602 1.44 0.160 ynaF b1376 putative filament protein Putative cell structure putative structure; Not classified b1377 2295 2256 1.02 0.008 1715 1762 -1.03 -0.012 2276 1739 0.013428 0.010468 E20 1 1 459 1.28 0.108 b1377 b1377 putative outer membrane protein putative membrane protein putative membrane; Not classified b1378 5690 5693 -1.00 0.000 5869 5834 1.01 0.003 5692 5851 0.033584 0.035228 P11 2 2 2448 -1.05 -0.021 ydbK b1378 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b1379 221 179 1.00 0.000 128 147 -1.00 0.000 200 137 0.001181 0.000827 N21 4 1 1143 1.00 0.000 hslJ b1379 heat shock protein hslJ Cell processes "factor; Adaptations, atypical conditions" b1380 2641 3521 -1.33 -0.125 3018 3464 -1.15 -0.060 3081 3241 0.018182 0.019514 L20 2 1 1326 -1.07 -0.031 ldhA b1380 "fermentative D-lactate dehydrogenase, NAD-dependent" Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b1381 2798 3403 -1.22 -0.085 3055 3190 -1.04 -0.019 3101 3123 0.018295 0.018799 A17 1 3 3137 -1.03 -0.012 ydbH b1381 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1382 212 314 -1.00 0.000 158 240 -1.00 0.000 263 199 0.001551 0.001197 C17 1 3 3138 1.00 0.000 ynbE b1382 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1383 681 674 1.01 0.004 197 300 -1.00 0.000 677 249 0.003997 0.001498 E17 1 3 3139 1.33 0.125 ydbL b1383 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1384 801 935 -1.17 -0.067 632 773 -1.22 -0.088 868 702 0.005120 0.004228 K5 3 1 214 1.21 0.083 feaR b1384 regulatory protein for 2-phenylethylamine catabolism Regulatory function regulator; Not classified b1385 748 624 1.20 0.079 550 662 -1.20 -0.081 686 606 0.004048 0.003647 B13 2 2 2449 1.11 0.045 feaB b1385 phenylacetaldehyde dehydrogenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b1386 16509 17946 -1.09 -0.036 15717 19492 -1.24 -0.093 17228 17605 0.101655 0.105989 C17 4 2 1890 -1.04 -0.018 tynA b1386 copper amine oxidase (tyramine oxidase) Central intermediary metabolism enzyme; Degradation of small molecules: Amines b1387 1396 1333 1.05 0.020 991 904 1.10 0.040 1364 947 0.008051 0.005704 G17 1 3 3140 1.41 0.150 maoC b1387 putative aldehyde dehydrogenase Putative enzymes putative enzyme; Not classified b1388 1035 1004 1.03 0.013 971 985 -1.01 -0.006 1020 978 0.006016 0.005886 I17 1 3 3141 1.02 0.009 ydbO b1388 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1389 503 547 -1.09 -0.036 550 648 -1.18 -0.071 525 599 0.003098 0.003609 K17 1 3 3142 -1.16 -0.066 ynbF b1389 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1390 1288 1168 1.10 0.042 2033 2128 -1.05 -0.020 1228 2080 0.007247 0.012525 M17 1 3 3143 -1.73 -0.238 ydbP b1390 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1391 1438 1674 -1.16 -0.066 2233 2661 -1.19 -0.076 1556 2447 0.009183 0.014733 O17 1 3 3144 -1.60 -0.205 b1391 b1391 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1392 962 1664 -1.73 -0.238 376 917 -1.83 -0.263 1313 647 0.007747 0.003893 N20 2 1 1327 1.99 0.299 b1392 b1392 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1393 289 306 -1.00 0.000 506 351 1.01 0.005 298 429 0.001757 0.002582 D13 2 2 2450 -1.00 0.000 ydbS b1393 putative enzyme Putative enzymes putative enzyme; Not classified b1394 553 469 1.11 0.044 146 243 -1.00 0.000 511 195 0.003016 0.001171 F13 2 2 2451 1.01 0.002 b1394 b1394 putative enzyme Putative enzymes putative enzyme; Not classified b1395 267 620 -1.24 -0.094 396 440 -1.00 0.000 444 418 0.002619 0.002515 A12 2 2 2057 1.00 0.000 ydbU b1395 putative enzyme Putative enzymes putative enzyme; Not classified b1396 1343 983 1.37 0.136 1265 1378 -1.09 -0.037 1163 1321 0.006864 0.007956 A19 1 3 3145 -1.16 -0.064 b1396 b1396 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1397 353 429 -1.00 0.000 287 533 -1.07 -0.028 391 410 0.002307 0.002471 C12 2 2 2058 -1.00 0.000 b1397 b1397 putative acyltransferase Putative enzymes putative enzyme; Not classified b1398 494 539 -1.08 -0.033 526 485 1.05 0.022 516 506 0.003046 0.003044 C19 1 3 3146 1.00 0.000 b1398 b1398 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1399 286 151 1.00 0.000 213 58 1.00 0.000 219 135 0.001291 0.000814 E19 1 3 3147 1.00 0.000 b1399 b1399 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1400 1409 1211 1.16 0.066 713 662 1.08 0.032 1310 687 0.007732 0.004139 G19 1 3 3148 1.87 0.271 b1400 b1400 putative transferase Putative enzymes putative enzyme; Not classified b1401 48 64 -1.00 0.000 59 -25 1.00 0.000 56 17 0.000331 0.000103 I19 1 3 3149 1.00 0.000 ydbA_1 b1401 split orf "Hypothetical, unclassified, unknown" orf; Unknown function b1402 3759 3482 1.08 0.033 2121 2414 -1.14 -0.056 3620 2268 0.021363 0.013653 K19 1 3 3150 1.56 0.194 yi22_2 b1402 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1403 27904 25050 1.11 0.047 18085 18243 -1.01 -0.004 26477 18164 0.156234 0.109358 M19 1 3 3151 1.43 0.155 yi21_2 b1403 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1404 1688 1577 1.07 0.030 392 442 -1.00 0.000 1632 417 0.009632 0.002510 K17 4 1 358 3.21 0.507 tra8_2 b1404 IS30 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1405 1341 882 1.52 0.182 1017 1063 -1.05 -0.019 1111 1040 0.006558 0.006263 O19 1 3 3152 1.05 0.020 ydbA_2 b1405 split orf "Hypothetical, unclassified, unknown" orf; Unknown function b1406 404 462 -1.00 0.000 -24 315 -1.00 0.000 433 146 0.002554 0.000876 H13 2 2 2452 1.00 0.000 ydbC b1406 putative dehydrogenase Putative enzymes putative enzyme; Not classified b1407 930 760 1.22 0.088 1005 1103 -1.10 -0.040 845 1054 0.004985 0.006348 A21 1 3 3153 -1.27 -0.105 ydbD b1407 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1408 322 331 -1.00 0.000 279 379 -1.00 0.000 327 329 0.001929 0.001982 J13 2 2 2453 -1.00 0.000 b1408 b1408 probable enzyme Putative enzymes putative enzyme; Not classified b1409 -88 313 -1.00 0.000 -168 1401 -2.80 -0.448 113 616 0.000664 0.003711 E12 2 2 2059 -1.24 -0.092 b1409 b1409 putative phosphatidate cytidiltransferase Putative enzymes putative enzyme; Central intermediary metabolism: Nucleotide interconversions b1410 1059 857 1.23 0.092 956 985 -1.03 -0.013 958 970 0.005653 0.005843 C21 1 3 3154 -1.03 -0.014 b1410 b1410 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1411 2181 1779 1.23 0.089 1061 750 1.42 0.151 1980 906 0.011682 0.005453 L13 2 2 2454 2.14 0.331 ynbD b1411 putative enzymes Putative enzymes putative enzyme; Not classified b1412 365 364 1.00 0.000 331 436 -1.00 0.000 365 383 0.002153 0.002307 G12 2 2 2060 -1.00 0.000 acpD b1412 acyl carrier protein phosphodiesterase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b1413 212 83 1.00 0.000 323 240 1.00 0.000 147 282 0.000868 0.001696 E23 1 2 1627 -1.00 0.000 hrpA b1413 "helicase, ATP-dependent" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1414 772 710 1.09 0.036 492 627 -1.25 -0.099 741 560 0.004371 0.003369 E21 1 3 3155 1.30 0.113 ydcF b1414 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1415 1096 1542 -1.41 -0.148 335 722 -1.44 -0.159 1319 528 0.007783 0.003179 P20 2 1 1328 2.45 0.389 aldA b1415 "aldehyde dehydrogenase, NAD-linked" Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b1416 645 797 -1.24 -0.092 191 297 -1.00 0.000 721 244 0.004252 0.001467 B22 2 1 1329 1.42 0.151 gapC_2 b1416 glyceraldehyde-3-phosphate dehydrogenase (second fragment) Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b1417 790 1503 -1.90 -0.279 357 732 -1.46 -0.166 1147 545 0.006766 0.003280 D22 2 1 1330 2.06 0.314 gapC_1 b1417 "glyceraldehyde 3-phosphate dehydrogenase C, interrupted" Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b1418 853 1211 -1.42 -0.153 657 869 -1.32 -0.122 1032 763 0.006089 0.004591 F22 2 1 1331 1.33 0.123 cybB b1418 cytochrome b(561) Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b1419 405 139 1.00 0.000 525 466 1.05 0.022 272 496 0.001605 0.002984 G21 1 3 3156 -1.00 0.000 ydcA b1419 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1420 656 452 1.31 0.118 979 874 1.12 0.049 554 926 0.003267 0.005577 I21 1 3 3157 -1.71 -0.232 b1420 b1420 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1421 435 533 -1.07 -0.028 245 293 -1.00 0.000 484 269 0.002855 0.001620 P21 4 1 1144 1.00 0.000 trg b1421 "methyl-accepting chemotaxis protein III, ribose sensor receptor" Regulatory function regulator; Chemotaxis and mobility b1422 1328 932 1.42 0.154 466 453 1.00 0.000 1130 459 0.006668 0.002765 M5 3 1 215 2.22 0.347 b1422 b1422 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b1423 994 833 1.19 0.077 1483 1388 1.07 0.029 914 1435 0.005392 0.008642 K21 1 3 3158 -1.60 -0.205 b1423 b1423 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1424 1225 1085 1.13 0.053 786 968 -1.23 -0.091 1155 877 0.006814 0.005280 G20 1 1 460 1.29 0.111 ydcG b1424 putative glycoprotein Putative cell structure putative structure; Not classified b1425 1280 1506 -1.18 -0.071 884 1115 -1.26 -0.101 1393 999 0.008219 0.006017 M21 1 3 3159 1.37 0.135 b1425 b1425 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1426 14273 13887 1.03 0.012 13354 14259 -1.07 -0.028 14080 13806 0.083083 0.083122 O21 1 3 3160 -1.00 0.000 ydcH b1426 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1427 376 630 -1.26 -0.101 223 476 -1.00 0.000 503 350 0.002970 0.002105 O19 2 2 1712 1.00 0.000 rimL b1427 acetylation of N-terminal serine of 30S ribosomal subunit protein L7; acetyl transferase "Translation, post-translational modification" enzyme; Ribosomes - maturation and modification b1428 1462 1065 1.37 0.137 493 779 -1.56 -0.192 1264 636 0.007456 0.003829 A23 1 3 3161 1.95 0.289 b1428 b1428 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1429 892 677 1.32 0.120 968 803 1.21 0.081 785 886 0.004631 0.005332 B23 4 1 1145 -1.15 -0.061 tehA b1429 tellurite resistance Cell processes transport; Drug/analog sensitivity b1430 1097 1279 -1.17 -0.067 785 694 1.13 0.053 1188 739 0.007009 0.004450 D23 4 1 1146 1.58 0.197 tehB b1430 tellurite resistance Putative transport proteins putative transport; Drug/analog sensitivity b1431 1507 1608 -1.07 -0.028 531 516 1.03 0.013 1557 524 0.009190 0.003152 C23 1 3 3162 2.92 0.465 b1431 b1431 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1432 3576 3283 1.09 0.037 2201 1884 1.17 0.068 3430 2043 0.020238 0.012299 E23 1 3 3163 1.65 0.216 b1432 b1432 putative virulence protein Putative factors putative factor; Not classified b1433 692 878 -1.27 -0.104 527 545 -1.03 -0.014 785 536 0.004632 0.003225 I20 1 1 461 1.44 0.157 b1433 b1433 putative membrane transport protein Putative transport proteins putative transport; Not classified b1434 637 603 1.06 0.024 1164 1149 1.01 0.005 620 1156 0.003658 0.006962 G23 1 3 3164 -1.90 -0.280 ydcN b1434 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1435 766 1007 -1.31 -0.119 775 811 -1.05 -0.020 887 793 0.005231 0.004775 N13 2 2 2455 1.10 0.040 ydcP b1435 putative collagenase Putative enzymes putative enzyme; Not classified b1436 4883 4591 1.06 0.027 3814 4096 -1.07 -0.031 4737 3955 0.027953 0.023813 I23 1 3 3165 1.17 0.070 b1436 b1436 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1437 1522 1194 1.27 0.105 1235 1192 1.04 0.015 1358 1214 0.008013 0.007307 K23 1 3 3166 1.10 0.040 b1437 b1437 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1438 42 29 1.00 0.000 -6 -16 1.00 0.000 35 -11 0.000207 -0.000065 M23 1 3 3167 1.00 0.000 b1438 b1438 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1439 1169 1165 1.00 0.001 828 938 -1.13 -0.054 1167 883 0.006888 0.005315 O5 3 1 216 1.30 0.113 b1439 b1439 multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system Putative regulatory proteins putative regulator; Not classified b1440 540 975 -1.81 -0.257 421 653 -1.31 -0.116 758 537 0.004472 0.003233 F23 2 1 955 1.38 0.141 b1440 b1440 putative transport protein Putative transport proteins putative transport; Not classified b1441 2729 2629 1.04 0.016 1681 1715 -1.02 -0.009 2679 1698 0.015807 0.010222 H23 2 1 956 1.55 0.189 b1441 b1441 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1442 2319 2924 -1.26 -0.101 5191 5820 -1.12 -0.050 2621 5505 0.015467 0.033146 J23 2 1 957 -2.14 -0.331 b1442 b1442 putative transport system permease protein Putative transport proteins putative transport; Not classified b1443 7600 7180 1.06 0.025 4613 4586 1.01 0.003 7390 4600 0.043606 0.027692 L23 2 1 958 1.57 0.197 b1443 b1443 putative transport system permease protein Putative transport proteins putative transport; Not classified b1444 540 779 -1.44 -0.159 459 492 -1.00 0.000 660 476 0.003892 0.002864 P13 2 2 2456 1.30 0.113 b1444 b1444 putative aldehyde dehydrogenase Putative enzymes putative enzyme; Not classified b1445 3355 3062 1.10 0.040 3491 3268 1.07 0.029 3209 3380 0.018932 0.020348 O23 1 3 3168 -1.07 -0.031 b1445 b1445 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1446 1815 1780 1.02 0.009 1276 1173 1.09 0.037 1797 1225 0.010606 0.007372 D10 2 3 3169 1.44 0.158 b1446 b1446 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1447 693 1130 -1.63 -0.212 406 580 -1.16 -0.064 911 493 0.005376 0.002968 C1 2 3 3170 1.79 0.253 b1447 b1447 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1448 4192 3283 1.28 0.106 2070 2362 -1.14 -0.057 3737 2216 0.022053 0.013342 F23 4 1 1147 1.65 0.218 b1448 b1448 putative resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b1449 1019 1886 -1.85 -0.267 523 841 -1.61 -0.206 1453 682 0.008572 0.004105 B15 2 2 2457 2.09 0.320 yncB b1449 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1450 250 512 -1.02 -0.010 256 245 1.00 0.000 381 251 0.002246 0.001509 E1 2 3 3171 1.00 0.000 b1450 b1450 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1451 1647 2194 -1.33 -0.125 2576 2795 -1.08 -0.035 1921 2685 0.011333 0.016168 N23 2 1 959 -1.43 -0.154 b1451 b1451 putative outer membrane receptor for iron transport Putative transport proteins putative transport; Not classified b1452 4616 3729 1.24 0.093 894 1841 -2.06 -0.314 4172 1368 0.024620 0.008234 P23 2 1 960 2.99 0.476 b1452 b1452 putative receptor Putative factors putative factor; Not classified b1453 585 746 -1.28 -0.106 413 708 -1.42 -0.151 666 561 0.003928 0.003375 A16 4 1 729 1.16 0.066 ansP b1453 L-asparagine permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b1454 286 604 -1.21 -0.082 49 238 -1.00 0.000 445 144 0.002626 0.000865 D15 2 2 2458 1.00 0.000 b1454 b1454 putative transferase Putative enzymes putative enzyme; Not classified b1455 492 608 -1.22 -0.085 262 333 -1.00 0.000 550 297 0.003246 0.001790 G1 2 3 3172 1.08 0.034 b1455 b1455 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1456 9 661 -1.32 -0.121 165 879 -1.76 -0.245 335 522 0.001976 0.003145 I1 2 3 3173 -1.05 -0.020 rhsE b1456 rhsE protein in rhs element "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1457 252 370 -1.00 0.000 315 158 1.00 0.000 311 237 0.001835 0.001424 K1 2 3 3174 1.00 0.000 ydcD b1457 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1458 803 600 1.34 0.126 388 167 1.00 0.000 701 277 0.004138 0.001670 M1 2 3 3175 1.38 0.140 b1458 b1458 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1459 1812 1951 -1.08 -0.032 978 1120 -1.15 -0.059 1882 1049 0.011102 0.006317 O1 2 3 3176 1.76 0.245 b1459 b1459 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1460 47145 44643 1.06 0.024 42012 39213 1.07 0.030 45894 40613 0.270806 0.244511 B1 3 1 961 1.11 0.044 ydcC b1460 putative receptor Putative factors putative factor; Not classified b1461 355 550 -1.10 -0.042 223 385 -1.00 0.000 453 304 0.002673 0.001829 A3 2 3 3177 1.00 0.000 ydcE b1461 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1462 682 614 1.11 0.046 532 518 1.03 0.011 648 525 0.003825 0.003159 C3 2 3 3178 1.21 0.083 b1462 b1462 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1463 430 708 -1.42 -0.151 40 369 -1.00 0.000 569 205 0.003358 0.001231 F15 2 2 2459 1.12 0.049 b1463 b1463 putative N-hydroxyarylamine O-acetyltransferase Putative enzymes putative enzyme; Not classified b1464 450 553 -1.11 -0.044 312 427 -1.00 0.000 501 370 0.002959 0.002225 E3 2 3 3179 1.00 0.000 yddE b1464 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1465 726 544 1.33 0.125 793 625 1.27 0.104 635 709 0.003746 0.004270 H22 2 1 1332 -1.14 -0.057 narV b1465 "cryptic nitrate reductase 2, gamma subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1466 8756 9731 -1.11 -0.046 3735 4312 -1.15 -0.062 9243 4024 0.054543 0.024224 J22 2 1 1333 2.25 0.352 narW b1466 "cryptic nitrate reductase 2, delta subunit, assembly function" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1467 13365 14205 -1.06 -0.026 10050 12651 -1.26 -0.100 13785 11350 0.081342 0.068336 L22 2 1 1334 1.19 0.076 narY b1467 "cryptic nitrate reductase 2, beta subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1468 1359 1758 -1.29 -0.112 974 1552 -1.59 -0.202 1558 1263 0.009195 0.007605 N22 2 1 1335 1.21 0.082 narZ b1468 "cryptic nitrate reductase 2, alpha subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1469 1024 1516 -1.48 -0.170 1078 1062 1.02 0.007 1270 1070 0.007492 0.006440 P22 2 1 1336 1.16 0.066 narU b1469 nitrite extrusion protein 2 Transport and binding proteins transport; Transport of small molecules: Anions b1470 -143 211 -1.00 0.000 104 17 1.00 0.000 34 61 0.000202 0.000367 G3 2 3 3180 -1.00 0.000 b1470 b1470 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1471 182 377 -1.00 0.000 205 363 -1.00 0.000 280 284 0.001650 0.001709 K20 1 1 462 -1.00 0.000 b1471 b1471 putative glycoportein Putative cell structure putative structure; Not classified b1472 634 323 1.27 0.103 534 531 1.01 0.003 479 533 0.002826 0.003207 K2 3 1 582 -1.07 -0.029 b1472 b1472 putative outer membrane porin protein putative membrane protein putative membrane; Not classified b1473 2105 2286 -1.09 -0.036 1365 1516 -1.11 -0.045 2196 1440 0.012957 0.008671 I3 2 3 3181 1.49 0.174 yddG b1473 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1474 -22 226 -1.00 0.000 145 194 -1.00 0.000 102 170 0.000603 0.001021 B24 2 1 1337 -1.00 0.000 fdnG b1474 "formate dehydrogenase-N, nitrate-inducible, alpha subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1475 8232 8959 -1.09 -0.037 3990 4697 -1.18 -0.071 8595 4344 0.050719 0.026151 D24 2 1 1338 1.94 0.288 fdnH b1475 "formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1476 1398 1666 -1.19 -0.076 605 590 1.03 0.011 1532 597 0.009041 0.003597 F24 2 1 1339 2.51 0.400 fdnI b1476 "formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1477 74 817 -1.63 -0.214 384 527 -1.05 -0.023 446 456 0.002631 0.002744 K3 2 3 3182 -1.00 0.000 yddM b1477 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1478 494 956 -1.91 -0.281 309 527 -1.05 -0.023 725 418 0.004277 0.002517 H15 2 2 2460 1.43 0.154 adhP b1478 alcohol dehydrogenase Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b1479 2436 480 4.87 0.688 3275 2751 1.19 0.076 1458 3013 0.008603 0.018142 E10 3 2 2147 -2.11 -0.324 sfcA b1479 NAD-linked malate dehydrogenase (malic enzyme) Central intermediary metabolism enzyme; Central intermediary metabolism: Gluconeogenesis b1480 36414 28564 1.27 0.105 18610 20834 -1.12 -0.049 32489 19722 0.191707 0.118735 A21 2 2 1713 1.61 0.208 rpsV b1480 30S ribosomal subunit protein S22 Putative cell structure putative structure; Not classified b1481 1150 1116 1.03 0.013 1073 1207 -1.12 -0.051 1133 1140 0.006686 0.006865 M3 2 3 3183 -1.03 -0.011 b1481 b1481 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1482 8762 7512 1.17 0.067 350 456 -1.00 0.000 8137 403 0.048014 0.002425 H23 4 1 1148 16.00 1.204 osmC b1482 osmotically inducible protein Cell processes phenotype; Osmotic adaptation b1483 18570 19064 -1.03 -0.011 13829 14629 -1.06 -0.024 18817 14229 0.111032 0.085666 C16 4 1 730 1.30 0.113 b1483 b1483 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1484 9879 9904 -1.00 -0.001 3683 3626 1.02 0.007 9892 3655 0.058367 0.022004 E16 4 1 731 2.65 0.424 b1484 b1484 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1485 12503 12105 1.03 0.014 5323 5637 -1.06 -0.025 12304 5480 0.072602 0.032993 G16 4 1 732 2.20 0.343 b1485 b1485 putative transport protein Putative transport proteins putative transport; Not classified b1486 3534 3381 1.05 0.019 1230 1166 1.05 0.023 3458 1198 0.020402 0.007211 I16 4 1 733 2.83 0.452 b1486 b1486 putative transport system permease protein Putative transport proteins putative transport; Not classified b1487 4250 4377 -1.03 -0.013 2883 3134 -1.09 -0.036 4314 3009 0.025453 0.018115 D1 3 1 962 1.41 0.148 b1487 b1487 putative hemin-binding lipoprotein Putative factors putative factor; Not classified b1488 737 1106 -1.50 -0.177 788 919 -1.17 -0.067 922 854 0.005438 0.005141 O3 2 3 3184 1.06 0.024 b1488 b1488 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1489 326 501 -1.00 -0.001 127 241 -1.00 0.000 413 184 0.002439 0.001108 A5 2 3 3185 1.00 0.000 b1489 b1489 putative enzyme Putative enzymes putative enzyme; Not classified b1490 1424 1695 -1.19 -0.076 951 917 1.04 0.016 1559 934 0.009201 0.005622 C5 2 3 3186 1.64 0.214 b1490 b1490 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1491 1150 1486 -1.29 -0.111 1065 1074 -1.01 -0.004 1318 1070 0.007777 0.006440 E5 2 3 3187 1.21 0.082 b1491 b1491 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1492 5721 5592 1.02 0.010 1396 1519 -1.09 -0.037 5656 1458 0.033376 0.008777 L11 4 2 2638 3.80 0.580 xasA b1492 "acid sensitivity protein, putative transporter" Putative factors putative transport; Not classified b1493 17393 14554 1.20 0.077 396 192 1.00 0.000 15973 294 0.094254 0.001770 G10 3 2 2148 31.42 1.497 gadB b1493 glutamate decarboxylase isozyme Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1494 5170 5037 1.03 0.011 7482 7930 -1.06 -0.025 5103 7706 0.030114 0.046397 G5 2 3 3188 -1.54 -0.188 pqqL b1494 putative peptidase Putative enzymes putative enzyme; Not classified b1495 583 842 -1.44 -0.159 338 680 -1.36 -0.134 712 509 0.004203 0.003066 I5 2 3 3189 1.37 0.137 yddB b1495 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1496 4349 4326 1.01 0.002 3597 3783 -1.05 -0.022 4337 3690 0.025594 0.022217 F1 3 1 963 1.15 0.061 yddA b1496 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1497 240 30 1.00 0.000 302 32 1.00 0.000 135 167 0.000798 0.001007 A7 3 1 217 -1.00 0.000 b1497 b1497 putative enzyme Putative enzymes putative enzyme; Not classified b1498 1063 1498 -1.41 -0.149 537 739 -1.38 -0.139 1280 638 0.007555 0.003842 J15 2 2 2461 1.97 0.294 b1498 b1498 putative sulfatase Putative enzymes putative enzyme; Not classified b1499 118 222 -1.00 0.000 181 224 -1.00 0.000 170 203 0.001004 0.001219 K5 2 3 3190 -1.00 0.000 b1499 b1499 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b1500 363 1002 -2.00 -0.302 157 150 1.00 0.000 682 153 0.004025 0.000922 M5 2 3 3191 1.34 0.128 b1500 b1500 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1501 1969 1652 1.19 0.076 1402 1328 1.06 0.024 1811 1365 0.010683 0.008219 L15 2 2 2462 1.30 0.114 b1501 b1501 "putative oxidoreductase, major subunit" Putative enzymes putative enzyme; Not classified b1502 410 269 1.00 0.000 182 196 -1.00 0.000 339 189 0.002002 0.001138 M20 1 1 463 1.00 0.000 b1502 b1502 putative adhesin; similar to FimH protein Putative cell structure putative structure; Not classified b1503 47 242 -1.00 0.000 74 261 -1.00 0.000 144 168 0.000852 0.001009 O5 2 3 3192 -1.00 0.000 b1503 b1503 putative fimbrial-like protein Putative cell structure putative structure; Not classified b1504 493 735 -1.47 -0.167 203 325 -1.00 0.000 614 264 0.003623 0.001588 A7 2 3 3193 1.21 0.082 b1504 b1504 putative fimbrial-like protein Putative cell structure putative structure; Not classified b1505 300 194 1.00 0.000 235 80 1.00 0.000 247 157 0.001456 0.000947 E8 3 1 603 1.00 0.000 b1505 b1505 putative outer membrane protein putative membrane protein putative membrane; Not classified b1506 131 109 1.00 0.000 44 100 -1.00 0.000 120 72 0.000708 0.000434 C7 2 3 3194 1.00 0.000 b1506 b1506 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1507 1469 1270 1.16 0.063 1148 1426 -1.24 -0.094 1370 1287 0.008082 0.007750 O20 1 1 464 1.04 0.018 hipA b1507 "persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator" Regulatory function "regulator; Murein sacculus, peptidoglycan" b1508 700 693 1.01 0.005 310 335 -1.00 0.000 697 322 0.004111 0.001941 A22 1 1 465 1.37 0.137 hipB b1508 persistence to inhibition of murein or DNA biosynthesis; regulatory protein Regulatory function "regulator; Murein sacculus, peptidoglycan" b1509 1685 1892 -1.12 -0.050 1854 1833 1.01 0.005 1788 1844 0.010552 0.011099 E7 2 3 3195 -1.05 -0.022 b1509 b1509 putative ATP-binding component of a transport system and adhesin protein Putative transport proteins putative transport; Not classified b1510 251 577 -1.15 -0.062 97 341 -1.00 0.000 414 219 0.002442 0.001318 G7 2 3 3196 1.00 0.000 ydeK b1510 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1511 395 412 -1.00 0.000 320 616 -1.23 -0.091 404 468 0.002381 0.002820 I7 2 3 3197 -1.00 0.000 ydeV b1511 putative kinase Putative enzymes putative enzyme; Not classified b1512 4617 2931 1.58 0.197 7432 7441 -1.00 -0.001 3774 7437 0.022270 0.044772 C7 3 1 218 -2.01 -0.303 ydeW b1512 "putative transcriptional regulator, sorC family" Putative regulatory proteins putative regulator; Not classified b1513 5705 5127 1.11 0.046 4740 4667 1.02 0.007 5416 4704 0.031960 0.028318 H1 3 1 964 1.13 0.053 b1513 b1513 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1514 14473 16821 -1.16 -0.065 10194 10457 -1.03 -0.011 15647 10326 0.092330 0.062166 J1 3 1 965 1.49 0.172 ydeY b1514 putative transport system permease protein Putative transport proteins putative transport; Not classified b1515 7336 7125 1.03 0.013 3673 3526 1.04 0.018 7230 3600 0.042665 0.021671 L1 3 1 966 1.97 0.294 ydeZ b1515 putative transport system permease protein Putative transport proteins putative transport; Not classified b1516 361 500 -1.00 0.000 194 371 -1.00 0.000 430 283 0.002540 0.001702 K7 2 3 3198 1.00 0.000 b1516 b1516 putative LACI-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1517 304 340 -1.00 0.000 240 449 -1.00 0.000 322 345 0.001900 0.002075 M7 2 3 3199 -1.00 0.000 yneB b1517 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1518 309 290 1.00 0.000 31 117 -1.00 0.000 300 74 0.001768 0.000446 O7 2 3 3200 1.00 0.000 b1518 b1518 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1519 1054 1404 -1.33 -0.125 861 1622 -1.88 -0.275 1229 1241 0.007251 0.007474 A9 2 3 3201 -1.03 -0.013 b1519 b1519 putative enzyme Putative enzymes putative enzyme; Not classified b1520 328 678 -1.36 -0.132 780 1223 -1.57 -0.195 503 1002 0.002967 0.006030 C9 2 3 3202 -2.01 -0.303 b1520 b1520 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1521 1801 1895 -1.05 -0.022 1005 1175 -1.17 -0.068 1848 1090 0.010905 0.006562 I7 1 1 29 1.66 0.221 uxaB b1521 altronate oxidoreductase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b1522 10444 9795 1.07 0.028 5720 5947 -1.04 -0.017 10119 5834 0.059712 0.035121 E9 2 3 3203 1.70 0.230 b1522 b1522 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1523 7023 6464 1.09 0.036 9601 9572 1.00 0.001 6744 9587 0.039792 0.057717 G9 2 3 3204 -1.45 -0.162 b1523 b1523 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1524 270 359 -1.00 0.000 238 259 -1.00 0.000 315 248 0.001856 0.001496 N15 2 2 2463 1.00 0.000 yneH b1524 putative glutaminase Putative enzymes putative enzyme; Not classified b1525 1958 1867 1.05 0.021 1386 1339 1.04 0.015 1912 1363 0.011285 0.008205 P15 2 2 2464 1.38 0.138 b1525 b1525 putative aldehyde dehydrogenase Putative enzymes putative enzyme; Not classified b1526 8843 8394 1.05 0.023 9537 9362 1.02 0.008 8618 9450 0.050854 0.056891 E7 3 1 219 -1.12 -0.049 yneJ b1526 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b1527 1074 1178 -1.10 -0.040 975 1099 -1.13 -0.052 1126 1037 0.006646 0.006242 I9 2 3 3205 1.06 0.027 b1527 b1527 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1528 6870 6907 -1.01 -0.002 3892 4327 -1.11 -0.046 6889 4109 0.040648 0.024741 J23 4 1 1149 1.64 0.216 ydeA b1528 putative resistance / regulatory protein Putative transport proteins putative transport; Drug/analog sensitivity b1529 315 302 1.00 0.000 47 242 -1.00 0.000 309 145 0.001822 0.000872 K9 2 3 3206 1.00 0.000 ydeB b1529 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1530 467 410 1.00 0.000 423 614 -1.23 -0.089 438 519 0.002586 0.003124 L23 4 1 1150 -1.04 -0.018 marR b1530 multiple antibiotic resistance protein; repressor of mar operon Regulatory function regulator; Drug/analog sensitivity b1531 39 238 -1.00 0.000 374 472 -1.00 0.000 139 423 0.000817 0.002547 N23 4 1 1151 -1.00 0.000 marA b1531 multiple antibiotic resistance; transcriptional activator of defense systems Regulatory function regulator; Drug/analog sensitivity b1532 85 67 1.00 0.000 104 235 -1.00 0.000 76 169 0.000449 0.001020 P23 4 1 1152 -1.00 0.000 marB b1532 multiple antibiotic resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b1533 2706 2819 -1.04 -0.018 538 903 -1.68 -0.225 2763 721 0.016302 0.004338 M9 2 3 3207 3.76 0.575 ydeD b1533 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1534 1719 2071 -1.20 -0.081 866 1512 -1.75 -0.242 1895 1189 0.011182 0.007159 O9 2 3 3208 1.56 0.194 ydeF b1534 putative transport protein Putative transport proteins putative transport; Not classified b1535 884 1532 -1.73 -0.239 1072 1199 -1.12 -0.049 1208 1136 0.007129 0.006837 A11 2 3 3209 1.04 0.018 ydeH b1535 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1536 450 438 1.00 0.000 223 576 -1.15 -0.061 444 400 0.002619 0.002406 C11 2 3 3210 1.00 0.000 ydeI b1536 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1537 494 664 -1.33 -0.123 481 870 -1.74 -0.241 579 675 0.003415 0.004067 E11 2 3 3211 -1.19 -0.076 ydeJ b1537 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1538 2354 2428 -1.03 -0.014 1328 1672 -1.26 -0.100 2391 1500 0.014109 0.009033 C21 2 2 1714 1.56 0.194 dcp b1538 dipeptidyl carboxypeptidase II Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b1539 208 358 -1.00 0.000 322 488 -1.00 0.000 283 405 0.001672 0.002437 B17 2 2 2465 -1.00 0.000 ydfG b1539 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1540 576 791 -1.37 -0.138 396 742 -1.48 -0.172 683 569 0.004031 0.003427 G11 2 3 3212 1.18 0.071 ydfH b1540 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1541 213 221 -1.00 0.000 132 241 -1.00 0.000 217 186 0.001281 0.001123 I11 2 3 3213 1.00 0.000 b1541 b1541 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1542 462 537 -1.07 -0.031 555 512 1.08 0.034 500 534 0.002947 0.003212 D17 2 2 2466 -1.07 -0.030 ydfI b1542 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1543 4445 3773 1.18 0.071 2775 2437 1.14 0.056 4109 2606 0.024247 0.015689 N1 3 1 967 1.55 0.189 b1543 b1543 putative transport protein Putative transport proteins putative transport; Not classified b1544 132 166 -1.00 0.000 79 108 -1.00 0.000 149 93 0.000881 0.000561 K11 2 3 3214 1.00 0.000 ydfK b1544 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1545 285 370 -1.00 0.000 118 269 -1.00 0.000 327 193 0.001931 0.001163 M11 2 3 3215 1.00 0.000 b1545 b1545 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1546 2402 2604 -1.08 -0.035 1657 1908 -1.15 -0.061 2503 1782 0.014770 0.010732 O11 2 3 3216 1.38 0.139 ydfM b1546 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1547 282 421 -1.00 0.000 360 367 -1.00 0.000 351 364 0.002072 0.002189 A13 2 3 3217 -1.00 0.000 b1547 b1547 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1548 31280 33848 -1.08 -0.034 17363 18042 -1.04 -0.017 32564 17703 0.192151 0.106580 M17 4 1 359 1.80 0.256 nohA b1548 homolog of Qin prophage packaging protein NU1 "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b1549 21 147 -1.00 0.000 170 107 1.00 0.000 84 139 0.000497 0.000834 C13 2 3 3218 -1.00 0.000 ydfO b1549 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1550 97 144 -1.00 0.000 110 204 -1.00 0.000 120 157 0.000709 0.000944 E13 2 3 3219 -1.00 0.000 b1550 b1550 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1551 -114 115 -1.00 0.000 -109 93 -1.00 0.000 1 -8 0.000005 -0.000047 G13 2 3 3220 1.00 0.000 b1551 b1551 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1552 271 353 -1.00 0.000 361 457 -1.00 0.000 312 409 0.001839 0.002463 I13 2 3 3221 -1.00 0.000 cspI b1552 cold shock-like protein "Hypothetical, unclassified, unknown" phenotype; Not classified b1553 330 360 -1.00 0.000 226 218 1.00 0.000 345 222 0.002036 0.001335 K13 2 3 3222 1.00 0.000 b1553 b1553 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1554 3401 3189 1.07 0.028 2734 2835 -1.04 -0.016 3295 2784 0.019440 0.016763 M13 2 3 3223 1.16 0.064 b1554 b1554 putative lysozyme Putative enzymes putative enzyme; Not classified b1555 329 169 1.00 0.000 738 828 -1.12 -0.050 249 783 0.001469 0.004714 O13 2 3 3224 -1.57 -0.196 b1555 b1555 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1556 6390 7106 -1.11 -0.046 4072 5397 -1.33 -0.122 6748 4734 0.039818 0.028504 A15 2 3 3225 1.40 0.145 b1556 b1556 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1557 364 505 -1.01 -0.004 493 63 1.00 0.000 435 278 0.002565 0.001674 B2 1 1 1153 1.00 0.000 cspB b1557 cold shock protein; may affect transcription Cell processes "phenotype; Adaptations, atypical conditions" b1558 2212 1929 1.15 0.059 1657 1961 -1.18 -0.073 2071 1809 0.012219 0.010893 N11 4 2 2639 1.12 0.050 cspF b1558 cold shock protein Putative factors phenotype; Not classified b1559 606 758 -1.25 -0.097 272 344 -1.00 0.000 682 308 0.004025 0.001853 C15 2 3 3226 1.34 0.128 b1559 b1559 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1560 74 429 -1.00 0.000 218 294 -1.00 0.000 252 256 0.001484 0.001541 E15 2 3 3227 -1.00 0.000 b1560 b1560 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1561 -20 109 -1.00 0.000 86 -4 1.00 0.000 44 41 0.000262 0.000246 G15 2 3 3228 1.00 0.000 rem b1561 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1562 1799 1180 1.53 0.183 746 777 -1.04 -0.017 1489 762 0.008789 0.004585 D2 1 1 1154 1.92 0.283 relF b1562 polypeptide destructive to membrane potential Cell processes factor; Cell killing b1563 2207 1258 1.75 0.244 876 987 -1.13 -0.052 1733 931 0.010223 0.005606 I15 2 3 3229 1.82 0.261 relE b1563 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1564 8308 8626 -1.04 -0.016 4677 5613 -1.20 -0.079 8467 5145 0.049961 0.030974 I11 2 1 141 1.61 0.208 relB b1564 negative regulator of translation Regulatory function regulator; Global regulatory functions b1565 1390 1296 1.07 0.030 1650 2511 -1.52 -0.182 1343 2080 0.007923 0.012525 K15 2 3 3230 -1.58 -0.199 b1565 b1565 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1566 746 553 1.35 0.130 224 443 -1.00 0.000 650 334 0.003833 0.002009 M15 2 3 3231 1.28 0.106 flxA b1566 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1567 189 409 -1.00 0.000 309 193 1.00 0.000 299 251 0.001762 0.001512 O15 2 3 3232 1.00 0.000 b1567 b1567 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1568 459 390 1.00 0.000 103 354 -1.00 0.000 424 228 0.002503 0.001373 A17 2 3 3233 1.00 0.000 b1568 b1568 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1569 662 571 1.16 0.064 312 502 -1.00 -0.002 617 407 0.003639 0.002449 F2 1 1 1155 1.21 0.084 dicC b1569 regulator of dicB Regulatory function regulator; Cell division b1570 939 709 1.33 0.122 583 629 -1.08 -0.033 824 606 0.004862 0.003650 H2 1 1 1156 1.33 0.125 dicA b1570 regulator of dicB Regulatory function regulator; Cell division b1571 4846 5171 -1.07 -0.028 5667 5503 1.03 0.013 5008 5585 0.029553 0.033625 C17 2 3 3234 -1.14 -0.056 ydfA b1571 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1572 431 526 -1.05 -0.022 523 686 -1.31 -0.118 478 605 0.002823 0.003640 E17 2 3 3235 -1.21 -0.084 ydfB b1572 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1573 9 273 -1.00 0.000 5 80 -1.00 0.000 141 43 0.000832 0.000256 G17 2 3 3236 1.00 0.000 ydfC b1573 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1575 294 304 -1.00 0.000 130 35 1.00 0.000 299 83 0.001764 0.000497 J2 1 1 1157 1.00 0.000 dicB b1575 inhibition of cell division Regulatory function regulator; Cell division b1576 -187 -29 -1.00 0.000 -104 102 -1.00 0.000 -108 -1 -0.000639 -0.000004 I17 2 3 3237 -1.00 0.000 ydfD b1576 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1577 277 264 1.00 0.000 157 306 -1.00 0.000 270 231 0.001596 0.001393 K17 2 3 3238 1.00 0.000 ydfE b1577 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1578 641 860 -1.34 -0.128 295 699 -1.40 -0.145 751 497 0.004429 0.002992 M17 2 3 3239 1.48 0.169 b1578 b1578 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1579 184 388 -1.00 0.000 118 108 1.00 0.000 286 113 0.001687 0.000680 O17 4 1 360 1.00 0.000 b1579 b1579 putative transposase Putative enzymes putative enzyme; Not classified b1580 585 804 -1.37 -0.138 124 263 -1.00 0.000 694 194 0.004096 0.001166 K11 2 1 142 1.37 0.135 rspB b1580 starvation sensing protein Regulatory function enzyme; Global regulatory functions b1581 527 642 -1.22 -0.086 312 305 1.00 0.000 585 308 0.003450 0.001856 M11 2 1 143 1.15 0.061 rspA b1581 starvation sensing protein Cell processes phenotype; Global regulatory functions b1582 19931 18689 1.07 0.028 25480 27280 -1.07 -0.030 19310 26380 0.113942 0.158823 O17 2 3 3240 -1.39 -0.144 b1582 b1582 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1583 3036 1946 1.56 0.193 3016 3397 -1.13 -0.052 2491 3206 0.014700 0.019304 A19 2 3 3241 -1.31 -0.118 b1583 b1583 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1584 16182 16227 -1.00 -0.001 28682 32234 -1.12 -0.051 16205 30458 0.095620 0.183372 I10 3 2 2149 -1.92 -0.283 speG b1584 spermidine N1-acetyltransferase Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b1585 432 437 -1.00 0.000 198 227 -1.00 0.000 435 213 0.002565 0.001279 C19 2 3 3242 1.00 0.000 ynfC b1585 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1586 1599 1447 1.11 0.043 1387 1476 -1.06 -0.027 1523 1432 0.008987 0.008619 E19 2 3 3243 1.04 0.018 b1586 b1586 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1587 943 1148 -1.22 -0.085 754 965 -1.28 -0.107 1046 859 0.006171 0.005174 H24 2 1 1340 1.19 0.077 b1587 b1587 "putative oxidoreductase, major subunit" Putative enzymes putative enzyme; Not classified b1588 1667 2345 -1.41 -0.148 1165 1306 -1.12 -0.050 2006 1235 0.011838 0.007437 J24 2 1 1341 1.59 0.202 b1588 b1588 "putative oxidoreductase, major subunit" Putative enzymes putative enzyme; Not classified b1589 1441 1535 -1.07 -0.027 1378 1678 -1.22 -0.085 1488 1528 0.008778 0.009200 G19 2 3 3244 -1.05 -0.020 b1589 b1589 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b1590 125 269 -1.00 0.000 229 255 -1.00 0.000 197 242 0.001162 0.001458 L24 2 1 1342 -1.00 0.000 b1590 b1590 putative DMSO reductase anchor subunit Putative enzymes putative enzyme; Degradation of small molecules: Carbon compounds b1591 213 141 1.00 0.000 237 180 1.00 0.000 177 208 0.001044 0.001255 I19 2 3 3245 -1.00 0.000 b1591 b1591 putative oxidoreductase component Putative enzymes putative enzyme; Not classified b1592 3901 3990 -1.02 -0.010 4380 3832 1.14 0.058 3946 4106 0.023281 0.024721 F4 2 3 968 -1.06 -0.026 b1592 b1592 putative chloride channel Putative transport proteins putative transport; Not classified b1593 -65 83 -1.00 0.000 29 156 -1.00 0.000 9 93 0.000054 0.000558 K19 2 3 3246 -1.00 0.000 b1593 b1593 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1594 2961 2681 1.10 0.043 2028 1709 1.19 0.074 2821 1869 0.016646 0.011251 K7 1 1 30 1.48 0.170 mlc b1594 putative NAGC-like transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1595 1856 1697 1.09 0.039 1126 1495 -1.33 -0.123 1777 1311 0.010484 0.007890 G7 3 1 220 1.33 0.123 ynfL b1595 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b1596 948 1126 -1.19 -0.075 231 1115 -2.23 -0.348 1037 673 0.006118 0.004052 M19 2 3 3247 1.51 0.179 ynfM b1596 putative transport protein Putative transport proteins putative transport; Not classified b1597 599 591 1.01 0.006 448 576 -1.15 -0.061 595 512 0.003510 0.003082 P11 4 2 2640 1.14 0.056 asr b1597 acid shock protein Cell processes phenotype; Not classified b1598 1975 2131 -1.08 -0.033 2713 2970 -1.09 -0.039 2053 2841 0.012115 0.017107 O19 2 3 3248 -1.41 -0.150 b1598 b1598 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1599 667 821 -1.23 -0.090 659 674 -1.02 -0.009 744 667 0.004392 0.004013 A21 2 3 3249 1.09 0.039 b1599 b1599 possible chaperone Putative factors putative factor; Not classified b1600 383 198 1.00 0.000 126 269 -1.00 0.000 291 198 0.001715 0.001189 C21 2 3 3250 1.00 0.000 b1600 b1600 possible chaperone Putative factors putative factor; Not classified b1601 367 356 1.00 0.000 242 280 -1.00 0.000 361 261 0.002131 0.001570 E21 2 3 3251 1.00 0.000 b1601 b1601 putative transport protein Putative transport proteins putative transport; Not classified b1602 4304 4073 1.06 0.024 1864 1533 1.22 0.085 4188 1699 0.024715 0.010226 K10 3 2 2150 2.42 0.383 pntB b1602 "pyridine nucleotide transhydrogenase, beta subunit" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1603 2256 1416 1.59 0.202 1032 818 1.26 0.101 1836 925 0.010835 0.005569 M10 3 2 2151 1.95 0.289 pntA b1603 "pyridine nucleotide transhydrogenase, alpha subunit" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1604 1269 1486 -1.17 -0.069 1253 1426 -1.14 -0.056 1378 1339 0.008129 0.008064 G21 2 3 3252 1.01 0.003 b1604 b1604 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1605 11542 9525 1.21 0.083 3745 5257 -1.40 -0.147 10533 4501 0.062155 0.027100 E17 4 2 1891 2.29 0.361 b1605 b1605 putative arginine/ornithine antiporter Putative transport proteins putative transport; Not classified b1606 1495 1414 1.06 0.024 3087 2886 1.07 0.029 1455 2986 0.008583 0.017980 I21 2 3 3253 -2.09 -0.321 ydgB b1606 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1607 581 469 1.16 0.065 254 445 -1.00 0.000 525 349 0.003098 0.002104 K21 2 3 3254 1.03 0.014 ydgC b1607 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1608 911 596 1.53 0.184 841 759 1.11 0.044 754 800 0.004447 0.004815 I7 3 1 221 -1.08 -0.034 rstA b1608 response transcriptional regulatory protein (RstB sensor) Regulatory function regulator; Not classified b1609 1076 1497 -1.39 -0.144 619 659 -1.06 -0.027 1287 639 0.007592 0.003845 O11 2 1 144 1.97 0.296 rstB b1609 sensor histidine protein kinase (RstA regulator) Regulatory function regulator; Global regulatory functions b1610 3158 2524 1.25 0.097 2073 2100 -1.01 -0.006 2841 2086 0.016764 0.012560 C1 1 2 1538 1.33 0.125 tus b1610 DNA-binding protein; inhibition of replication at Ter sites "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b1611 772 999 -1.29 -0.112 1300 1258 1.03 0.014 886 1279 0.005226 0.007700 N24 2 1 1343 -1.47 -0.168 fumC b1611 fumarase C= fumarate hydratase Class II; isozyme Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b1612 2195 1679 1.31 0.116 3187 3206 -1.01 -0.003 1937 3196 0.011429 0.019245 L4 2 3 1344 -1.68 -0.226 fumA b1612 fumarase A = fumarate hydratase Class I; aerobic isozyme Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b1613 1903 1815 1.05 0.021 2042 1770 1.15 0.062 1859 1906 0.010968 0.011474 M7 1 1 31 -1.05 -0.020 manA b1613 mannose-6-phosphate isomerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b1614 7185 6984 1.03 0.012 6639 7819 -1.18 -0.071 7084 7229 0.041803 0.043523 M21 2 3 3255 -1.04 -0.018 ydgA b1614 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1615 449 519 -1.04 -0.016 448 512 -1.02 -0.010 484 480 0.002856 0.002888 M2 3 1 583 -1.00 0.000 uidC b1615 membrane-associated protein Cell structure membrane; Inner membrane b1616 403 599 -1.20 -0.079 293 291 1.00 0.000 501 292 0.002957 0.001758 K16 4 1 734 1.00 0.000 uidB b1616 glucuronide permease Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1617 35560 34319 1.04 0.015 33640 32831 1.02 0.011 34939 33235 0.206167 0.200095 O7 1 1 32 1.03 0.013 uidA b1617 beta-D-glucuronidase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b1618 576 813 -1.41 -0.150 670 585 1.15 0.059 695 627 0.004099 0.003777 K7 3 1 222 1.09 0.035 uidR b1618 repressor for uid operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b1619 30398 26268 1.16 0.063 24684 26642 -1.08 -0.033 28333 25663 0.167185 0.154504 O10 3 2 2152 1.08 0.034 hdhA b1619 "NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1620 3114 2713 1.15 0.060 2203 2052 1.07 0.031 2913 2128 0.017191 0.012810 A9 1 1 33 1.34 0.128 malI b1620 repressor of malX and Y genes Regulatory function regulator; Degradation of small molecules: Carbon compounds b1621 309 920 -1.84 -0.265 200 897 -1.79 -0.254 614 549 0.003623 0.003303 M16 4 1 735 1.10 0.040 malX b1621 "PTS system, maltose and glucose-specific II ABC" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1622 1635 1247 1.31 0.118 1680 1573 1.07 0.029 1441 1627 0.008503 0.009793 C9 1 1 34 -1.15 -0.061 malY b1622 "enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b1623 963 883 1.09 0.038 768 639 1.20 0.080 923 703 0.005446 0.004235 K22 1 2 2006 1.29 0.109 add b1623 adenosine deaminase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b1624 1059 1228 -1.16 -0.064 1165 2139 -1.84 -0.264 1143 1652 0.006746 0.009947 O21 2 3 3256 -1.47 -0.169 b1624 b1624 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1625 207 335 -1.00 0.000 298 776 -1.55 -0.191 271 537 0.001598 0.003233 A23 2 3 3257 -1.08 -0.033 b1625 b1625 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1626 473 360 1.00 0.000 587 700 -1.19 -0.077 416 644 0.002455 0.003875 C23 2 3 3258 -1.29 -0.111 b1626 b1626 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1627 370 637 -1.27 -0.105 509 721 -1.42 -0.151 503 615 0.002970 0.003704 E23 2 3 3259 -1.23 -0.092 b1627 b1627 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1628 302 392 -1.00 0.000 433 443 -1.00 0.000 347 438 0.002049 0.002636 G23 2 3 3260 -1.00 0.000 b1628 b1628 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1629 2129 2091 1.02 0.008 2198 2473 -1.12 -0.051 2110 2335 0.012453 0.014060 I23 2 3 3261 -1.13 -0.053 b1629 b1629 putative membrane protein putative membrane protein putative membrane; Not classified b1630 792 754 1.05 0.021 1091 1542 -1.41 -0.150 773 1317 0.004562 0.007928 K23 2 3 3262 -1.74 -0.240 ydgO b1630 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1631 461 319 1.00 0.000 401 538 -1.08 -0.032 390 470 0.002301 0.002829 M23 2 3 3263 -1.00 0.000 b1631 b1631 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1632 4784 4444 1.08 0.032 3987 4118 -1.03 -0.014 4614 4053 0.027228 0.024400 O23 2 3 3264 1.12 0.048 ydgQ b1632 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1633 543 613 -1.13 -0.052 545 689 -1.26 -0.102 578 617 0.003411 0.003713 G23 1 2 1628 -1.09 -0.037 nth b1633 endonuclease III; specific for apurinic and/or apyrimidinic sites "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b1634 10285 11092 -1.08 -0.033 4693 4957 -1.06 -0.024 10689 4825 0.063070 0.029050 O16 4 1 736 2.17 0.337 ydgR b1634 putative transport protein Putative transport proteins putative transport; Not classified b1635 2417 2068 1.17 0.068 660 728 -1.10 -0.043 2242 694 0.013232 0.004176 F5 1 2 2323 3.17 0.501 gst b1635 glutathionine S-transferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b1636 533 866 -1.62 -0.210 1598 1686 -1.06 -0.023 699 1642 0.004127 0.009886 F10 2 3 3265 -2.40 -0.379 pdxY b1636 pyridoxal kinase 2 / pyridoxine kinase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" b1637 1749 2174 -1.24 -0.094 1669 2442 -1.46 -0.165 1962 2056 0.011575 0.012377 E21 2 2 1715 -1.07 -0.029 tyrS b1637 tyrosine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1638 3679 3675 1.00 0.000 2502 2685 -1.07 -0.031 3677 2594 0.021695 0.015615 H5 1 2 2324 1.39 0.143 pdxH b1638 pyridoxinephosphate oxidase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" b1639 1930 1698 1.14 0.056 1499 1258 1.19 0.076 1814 1378 0.010703 0.008299 C1 3 3 3266 1.29 0.110 ydhA b1639 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1640 2002 1412 1.42 0.152 1880 1768 1.06 0.027 1707 1824 0.010074 0.010982 E1 3 3 3267 -1.09 -0.037 b1640 b1640 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1641 3776 3279 1.15 0.061 7394 7235 1.02 0.009 3527 7314 0.020813 0.044037 G1 3 3 3268 -2.12 -0.325 slyB b1641 putative outer membrane protein putative membrane protein putative membrane; Not classified b1642 913 2055 -2.25 -0.353 1429 1511 -1.06 -0.024 1484 1470 0.008756 0.008850 I1 3 3 3269 -1.01 -0.005 slyA b1642 transcriptional regulator for cryptic hemolysin Regulatory function "regulator; Adaptations, atypical conditions" b1643 540 175 1.08 0.033 231 231 -1.00 0.000 357 231 0.002109 0.001391 K1 3 3 3270 1.00 0.000 b1643 b1643 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1644 881 647 1.36 0.134 1334 1601 -1.20 -0.079 764 1467 0.004508 0.008834 M1 3 3 3271 -1.96 -0.292 b1644 b1644 putative membrane protein putative membrane protein putative membrane; Not classified b1645 4866 3534 1.38 0.139 3878 3149 1.23 0.090 4200 3513 0.024785 0.021153 O1 3 3 3272 1.17 0.069 b1645 b1645 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1646 1421 1313 1.08 0.034 485 338 1.00 0.000 1367 411 0.008066 0.002476 L2 1 1 1158 2.69 0.430 sodC b1646 superoxide dismutase precursor (Cu-Zn) Cell processes enzyme; Detoxification b1647 2169 1693 1.28 0.108 1307 1499 -1.15 -0.059 1931 1403 0.011396 0.008448 A3 3 3 3273 1.35 0.130 b1647 b1647 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1648 1861 1632 1.14 0.057 1082 1169 -1.08 -0.033 1747 1125 0.010307 0.006775 C3 3 3 3274 1.52 0.182 b1648 b1648 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1649 3414 2413 1.42 0.151 2387 2044 1.17 0.067 2914 2216 0.017193 0.013341 E3 3 3 3275 1.29 0.110 b1649 b1649 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1650 3196 2678 1.19 0.077 1881 1184 1.59 0.201 2937 1533 0.017328 0.009227 B2 3 1 1345 1.88 0.274 nemA b1650 N-ethylmaleimide reductase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1651 4741 5135 -1.08 -0.035 5572 6509 -1.17 -0.068 4938 6040 0.029135 0.036366 G3 3 3 3276 -1.25 -0.096 gloA b1651 lactoylglutathione lyase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b1652 1470 1357 1.08 0.035 1877 1289 1.46 0.163 1413 1583 0.008339 0.009531 E1 1 2 1539 -1.14 -0.058 rnt b1652 "RNase T, degrades tRNA" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b1653 2114 2131 -1.01 -0.003 925 665 1.39 0.144 2122 795 0.012523 0.004787 G1 1 2 1540 2.62 0.418 lhr b1653 member of ATP-dependent helicase superfamily II "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1654 4975 4920 1.01 0.005 4831 4942 -1.02 -0.010 4948 4887 0.029195 0.029420 I3 3 3 3277 -1.01 -0.003 ydhD b1654 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1655 979 828 1.18 0.073 677 461 1.35 0.131 904 569 0.005332 0.003424 K3 3 3 3278 1.56 0.192 ydhO b1655 putative lipoprotein putative membrane protein putative membrane; Not classified b1656 472 602 -1.20 -0.081 4127 4311 -1.04 -0.019 537 4219 0.003171 0.025400 N2 1 1 1159 -8.01 -0.904 sodB b1656 "superoxide dismutase, iron" Cell processes enzyme; Detoxification b1657 626 828 -1.32 -0.121 879 689 1.28 0.106 727 784 0.004290 0.004720 M3 3 3 3279 -1.10 -0.041 b1657 b1657 putative transport protein Putative transport proteins putative transport; Not classified b1658 583 589 -1.01 -0.005 706 692 1.02 0.009 586 699 0.003459 0.004210 M22 1 2 2007 -1.22 -0.085 purR b1658 "transcriptional repressor for pur regulon, glyA, glnB, prsA, speA" Regulatory function regulator; Purine ribonucleotide biosynthesis b1659 523 386 1.05 0.020 245 346 -1.00 0.000 455 295 0.002682 0.001778 M7 3 1 223 1.00 0.000 ydhB b1659 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b1660 1873 1877 -1.00 -0.001 697 1161 -1.67 -0.221 1875 929 0.011066 0.005592 B3 3 1 969 1.98 0.296 ydhC b1660 putative transport protein Putative transport proteins putative transport; Not classified b1661 5720 5901 -1.03 -0.014 1028 1714 -1.67 -0.222 5810 1371 0.034285 0.008253 I12 2 2 2061 4.15 0.618 cfa b1661 cyclopropane fatty acyl phospholipid synthase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b1662 5795 4788 1.21 0.083 3201 2964 1.08 0.033 5292 3083 0.031226 0.018559 J5 1 2 2325 1.68 0.226 ribE b1662 "riboflavin synthase, alpha chain" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Riboflavin" b1663 3251 3911 -1.20 -0.080 4015 3774 1.06 0.027 3581 3894 0.021128 0.023446 O3 3 3 3280 -1.11 -0.045 ydhE b1663 putative transport protein Putative transport proteins putative transport; Not classified b1664 2274 1695 1.34 0.128 2141 2344 -1.09 -0.039 1984 2243 0.011709 0.013503 A5 3 3 3281 -1.15 -0.062 b1664 b1664 possible enzyme Putative enzymes putative enzyme; Not classified b1667 447 265 1.00 0.000 164 212 -1.00 0.000 356 188 0.002102 0.001131 C5 3 3 3282 1.00 0.000 b1667 b1667 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1668 3115 2151 1.45 0.161 3267 2663 1.23 0.089 2633 2965 0.015537 0.017852 E5 3 3 3283 -1.15 -0.060 b1668 b1668 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1669 569 575 -1.01 -0.004 658 535 1.23 0.090 572 596 0.003374 0.003589 G5 3 3 3284 -1.06 -0.027 b1669 b1669 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1670 789 617 1.28 0.107 396 524 -1.05 -0.020 703 460 0.004149 0.002769 I5 3 3 3285 1.38 0.141 ydhU b1670 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1671 233 254 -1.00 0.000 244 174 1.00 0.000 243 209 0.001436 0.001258 K5 3 3 3286 1.00 0.000 b1671 b1671 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b1672 2149 1899 1.13 0.054 2666 2673 -1.00 -0.001 2024 2669 0.011941 0.016069 M5 3 3 3287 -1.35 -0.129 b1672 b1672 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1673 2941 2693 1.09 0.038 2432 2588 -1.06 -0.027 2817 2510 0.016622 0.015114 O5 3 3 3288 1.10 0.041 b1673 b1673 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1674 690 525 1.31 0.119 583 753 -1.29 -0.112 608 668 0.003586 0.004023 A7 3 3 3289 -1.12 -0.050 b1674 b1674 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b1675 685 615 1.11 0.047 907 988 -1.09 -0.037 650 948 0.003837 0.005705 C7 3 3 3290 -1.49 -0.172 b1675 b1675 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1676 4851 3599 1.35 0.130 4576 3860 1.19 0.074 4225 4218 0.024931 0.025396 D2 3 1 1346 -1.02 -0.008 pykF b1676 "pyruvate kinase I (formerly F), fructose stimulated" Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b1677 16217 14913 1.09 0.036 10853 9650 1.12 0.051 15565 10251 0.091844 0.061719 C22 1 1 466 1.49 0.173 lpp b1677 murein lipoprotein Cell structure "membrane; Murein sacculus, peptidoglycan" b1678 2967 1256 2.36 0.373 913 698 1.31 0.117 2112 805 0.012462 0.004849 E7 3 3 3291 2.57 0.410 ynhG b1678 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1679 2574 1930 1.33 0.125 1610 1496 1.08 0.032 2252 1553 0.013290 0.009352 G7 3 3 3292 1.42 0.153 ynhA b1679 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1680 632 796 -1.26 -0.100 95 352 -1.00 0.000 714 223 0.004212 0.001343 F17 2 2 2467 1.40 0.147 b1680 b1680 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1681 6143 6291 -1.02 -0.010 3294 3159 1.04 0.018 6217 3227 0.036685 0.019427 I7 3 3 3293 1.89 0.276 ynhC b1681 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1682 1670 1286 1.30 0.114 798 694 1.15 0.061 1478 746 0.008723 0.004491 K7 3 3 3294 1.94 0.288 ynhD b1682 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1683 4156 4115 1.01 0.004 881 769 1.15 0.059 4136 825 0.024405 0.004969 M7 3 3 3295 4.91 0.691 ynhE b1683 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1684 8368 9006 -1.08 -0.032 9190 9386 -1.02 -0.009 8687 9288 0.051260 0.055920 O7 3 3 3296 -1.09 -0.038 ydiC b1684 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1685 4595 4769 -1.04 -0.016 5929 5316 1.12 0.047 4682 5623 0.027629 0.033851 A9 3 3 3297 -1.23 -0.088 b1685 b1685 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1686 934 714 1.31 0.117 1271 1012 1.26 0.099 824 1142 0.004863 0.006873 C9 3 3 3298 -1.41 -0.150 b1686 b1686 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1687 2028 1301 1.56 0.193 1183 1026 1.15 0.062 1665 1104 0.009823 0.006650 E9 3 3 3299 1.48 0.169 ydiJ b1687 putative oxidase Putative enzymes putative enzyme; Not classified b1688 1498 1081 1.39 0.142 1331 1306 1.02 0.008 1290 1319 0.007611 0.007938 G9 3 3 3300 -1.04 -0.018 b1688 b1688 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1689 1270 899 1.41 0.150 882 946 -1.07 -0.030 1084 914 0.006397 0.005502 I9 3 3 3301 1.16 0.066 b1689 b1689 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1690 3833 3900 -1.02 -0.008 1774 1647 1.08 0.032 3866 1711 0.022815 0.010301 D3 3 1 970 2.21 0.345 b1690 b1690 putative transport system permease protein Putative transport proteins putative transport; Not classified b1691 1115 1027 1.09 0.036 1120 814 1.38 0.139 1071 967 0.006320 0.005824 F3 3 1 971 1.09 0.036 b1691 b1691 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b1692 1159 847 1.37 0.136 582 746 -1.28 -0.108 1003 664 0.005917 0.003997 H17 2 2 2468 1.48 0.170 ydiB b1692 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1693 3228 4144 -1.28 -0.108 2210 2127 1.04 0.017 3686 2168 0.021751 0.013055 G17 4 2 1892 1.67 0.222 aroD b1693 3-dehydroquinate dehydratase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Chorismate b1694 1147 1141 1.01 0.002 948 706 1.34 0.128 1144 827 0.006749 0.004981 K9 3 3 3302 1.35 0.132 ydiF b1694 putative enzyme Putative enzymes putative enzyme; Not classified b1695 -33 367 -1.00 0.000 137 267 -1.00 0.000 167 202 0.000986 0.001218 J17 2 2 2469 -1.00 0.000 b1695 b1695 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1696 544 352 1.09 0.037 325 435 -1.00 0.000 448 380 0.002646 0.002288 M9 3 3 3303 1.00 0.000 b1696 b1696 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b1697 4696 4721 -1.01 -0.002 3487 2784 1.25 0.098 4709 3136 0.027786 0.018878 F2 3 1 1347 1.47 0.168 ydiQ b1697 putative transport protein Putative transport proteins putative transport; Not classified b1698 425 472 -1.00 0.000 382 298 1.00 0.000 448 340 0.002646 0.002046 H2 3 1 1348 1.00 0.000 ydiR b1698 putative flavoprotein Putative enzymes putative enzyme; Not classified b1699 2433 2334 1.04 0.018 1672 1631 1.03 0.011 2383 1652 0.014064 0.009943 O9 3 3 3304 1.41 0.151 ydiS b1699 flavoprotein; probably electron transport Putative enzymes putative enzyme; Not classified b1700 3610 4173 -1.16 -0.063 1439 1293 1.11 0.047 3892 1366 0.022965 0.008221 A11 3 3 3305 2.79 0.446 ydiT b1700 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1701 223 126 1.00 0.000 99 30 1.00 0.000 175 64 0.001032 0.000386 A12 3 2 2153 1.00 0.000 ydiD b1701 putative ligase/synthetase Putative enzymes putative enzyme; Not classified b1702 989 701 1.41 0.150 191 213 -1.00 0.000 845 202 0.004986 0.001217 C12 3 2 2154 1.66 0.221 ppsA b1702 phosphoenolpyruvate synthase Central intermediary metabolism enzyme; Central intermediary metabolism: Gluconeogenesis b1703 853 705 1.21 0.083 908 924 -1.02 -0.008 779 916 0.004595 0.005517 C11 3 3 3306 -1.20 -0.079 ydiA b1703 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1704 2908 3778 -1.30 -0.114 2202 2056 1.07 0.030 3343 2129 0.019727 0.012819 I17 4 2 1893 1.54 0.187 aroH b1704 "3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible)" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tryptophan b1705 968 586 1.65 0.218 1458 1381 1.06 0.023 777 1419 0.004587 0.008544 E11 3 3 3307 -1.86 -0.270 ydiE b1705 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1706 6412 6876 -1.07 -0.030 4968 4335 1.15 0.059 6644 4651 0.039205 0.028003 G11 3 3 3308 1.40 0.146 b1706 b1706 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1707 2369 1639 1.45 0.160 1877 1902 -1.01 -0.006 2004 1889 0.011827 0.011374 I11 3 3 3309 1.04 0.017 b1707 b1707 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1708 3473 3982 -1.15 -0.059 2419 2324 1.04 0.017 3727 2372 0.021994 0.014278 O2 3 1 584 1.54 0.188 nlpC b1708 lipoprotein Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b1709 782 903 -1.15 -0.063 424 388 1.00 0.000 843 406 0.004973 0.002443 A18 4 1 737 1.66 0.220 btuD b1709 ATP-binding component of vitamin B12 transport system Transport and binding proteins transport; Transport of small molecules: Other b1710 1393 1680 -1.21 -0.081 223 432 -1.00 0.000 1537 327 0.009067 0.001969 C18 4 1 738 3.02 0.480 btuE b1710 vitamin B12 transport Transport and binding proteins transport; Transport of small molecules: Other b1711 1128 1481 -1.31 -0.118 715 848 -1.19 -0.074 1305 781 0.007698 0.004702 E18 4 1 739 1.64 0.214 btuC b1711 vitamin B12 transport permease protein Transport and binding proteins transport; Transport of small molecules: Other b1712 2520 2384 1.06 0.024 2642 2242 1.18 0.071 2452 2442 0.014467 0.014704 I1 1 2 1541 -1.02 -0.007 himA b1712 "integration host factor (IHF), alpha subunit; site specific recombination" "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b1713 13298 12910 1.03 0.013 7673 9311 -1.21 -0.084 13104 8492 0.077323 0.051127 G21 2 2 1716 1.51 0.180 pheT b1713 "phenylalanine tRNA synthetase, beta-subunit" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1714 1326 2132 -1.61 -0.206 2322 2582 -1.11 -0.046 1729 2452 0.010201 0.014761 I21 2 2 1717 -1.45 -0.160 pheS b1714 "phenylalanine tRNA synthetase, alpha-subunit" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1715 16 217 -1.00 0.000 26 239 -1.00 0.000 116 132 0.000687 0.000798 K21 2 2 1718 -1.00 0.000 pheM b1715 phenylalanyl-tRNA synthetase (pheST) operon leader peptide "Translation, post-translational modification" "leader; Aminoacyl tRNA synthetases, tRNA modification" b1716 5128 6113 -1.19 -0.076 11461 11629 -1.01 -0.006 5620 11545 0.033164 0.069509 M21 2 2 1719 -2.10 -0.321 rplT b1716 "50S ribosomal subunit protein L20, and regulator" "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b1717 13297 13150 1.01 0.005 24691 24114 1.02 0.010 13224 24402 0.078028 0.146916 O21 2 2 1720 -1.88 -0.275 rpmI b1717 50S ribosomal subunit protein A "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b1718 25706 23347 1.10 0.042 42777 44364 -1.04 -0.016 24526 43571 0.144723 0.262319 A23 2 2 1721 -1.81 -0.258 infC b1718 protein chain initiation factor IF-3 "Translation, post-translational modification" factor; Proteins - translation and modification b1719 21576 19972 1.08 0.034 20661 20290 1.02 0.008 20774 20476 0.122581 0.123274 C23 2 2 1722 -1.01 -0.002 thrS b1719 threonine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1720 768 611 1.26 0.100 467 416 1.00 0.000 689 441 0.004067 0.002658 K11 3 3 3310 1.36 0.132 b1720 b1720 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1721 1720 1396 1.23 0.091 1170 1209 -1.03 -0.014 1558 1190 0.009196 0.007162 M11 3 3 3311 1.28 0.109 b1721 b1721 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1722 848 899 -1.06 -0.025 1892 1516 1.25 0.096 873 1704 0.005154 0.010258 O11 3 3 3312 -1.99 -0.299 b1722 b1722 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1723 2788 2285 1.22 0.086 1021 854 1.20 0.077 2536 938 0.014967 0.005646 J2 3 1 1349 2.65 0.423 pfkB b1723 6-phosphofructokinase II; suppressor of pfkA Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b1724 2983 3554 -1.19 -0.076 273 241 1.00 0.000 3269 257 0.019289 0.001548 A13 3 3 3313 6.43 0.808 b1724 b1724 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1725 1169 1304 -1.11 -0.047 533 481 1.07 0.028 1237 507 0.007297 0.003055 C13 3 3 3314 2.39 0.378 b1725 b1725 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1726 437 325 1.00 0.000 409 334 1.00 0.000 381 371 0.002248 0.002236 E13 3 3 3315 1.00 0.000 b1726 b1726 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1727 1606 1850 -1.15 -0.062 1729 1697 1.02 0.008 1728 1713 0.010196 0.010315 G13 3 3 3316 -1.01 -0.005 yniC b1727 putative phosphatase Putative enzymes putative enzyme; Not classified b1728 393 210 1.00 0.000 462 332 1.00 0.000 302 397 0.001780 0.002388 I13 3 3 3317 -1.00 0.000 b1728 b1728 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1729 2491 2408 1.03 0.015 1509 1623 -1.08 -0.032 2449 1566 0.014454 0.009428 H3 3 1 972 1.53 0.186 b1729 b1729 part of a kinase Putative enzymes putative enzyme; Not classified b1730 401 622 -1.24 -0.095 141 147 -1.00 0.000 511 144 0.003017 0.000867 K13 3 3 3318 1.01 0.003 b1730 b1730 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1731 5744 4344 1.32 0.121 3645 3430 1.06 0.026 5044 3538 0.029764 0.021298 M13 3 3 3319 1.40 0.145 b1731 b1731 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1732 4351 3590 1.21 0.084 671 229 1.34 0.127 3971 450 0.023430 0.002708 P2 1 1 1160 7.81 0.893 katE b1732 catalase; hydroperoxidase HPII(III) Cell processes enzyme; Detoxification b1733 14758 13128 1.12 0.051 15951 16677 -1.05 -0.019 13943 16314 0.082274 0.098218 O13 3 3 3320 -1.19 -0.077 ydjC b1733 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1734 869 902 -1.04 -0.016 444 631 -1.26 -0.101 885 537 0.005224 0.003236 E9 1 1 35 1.61 0.208 celF b1734 phospho-beta-glucosidase; cryptic Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b1735 214 337 -1.00 0.000 206 203 1.00 0.000 275 205 0.001625 0.001232 G9 1 1 36 1.00 0.000 celD b1735 negative transcriptional regulator of cel operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b1736 3299 3388 -1.03 -0.012 1809 1436 1.26 0.100 3344 1622 0.019729 0.009767 G18 4 1 740 2.02 0.305 celC b1736 "PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1737 1724 1713 1.01 0.003 661 781 -1.18 -0.073 1718 721 0.010140 0.004339 I18 4 1 741 2.34 0.369 celB b1737 "PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1738 883 893 -1.01 -0.005 459 624 -1.25 -0.096 888 541 0.005239 0.003259 K18 4 1 742 1.61 0.206 celA b1738 "PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1739 6446 5338 1.21 0.082 2345 2813 -1.20 -0.079 5892 2579 0.034767 0.015527 A13 2 1 145 2.24 0.350 osmE b1739 activator of ntrL gene Regulatory function regulator; Global regulatory functions b1740 1958 1426 1.37 0.138 949 950 -1.00 0.000 1692 950 0.009982 0.005719 L5 1 2 2326 1.75 0.242 nadE b1740 "NAD synthetase, prefers NH3 over glutamine" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" b1741 9150 9384 -1.03 -0.011 8860 8520 1.04 0.017 9267 8690 0.054681 0.052321 A15 3 3 3321 1.05 0.019 b1741 b1741 putative excinuclease subunit Putative enzymes putative enzyme; Not classified b1742 739 570 1.30 0.113 634 606 1.05 0.020 654 620 0.003862 0.003732 C15 3 3 3322 1.03 0.015 b1742 b1742 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1743 652 413 1.30 0.115 255 386 -1.00 0.000 532 321 0.003139 0.001932 E15 3 3 3323 1.05 0.020 spy b1743 periplasmic protein related to spheroblast formation "Hypothetical, unclassified, unknown" phenotype; Not classified b1744 1028 859 1.20 0.078 473 490 -1.00 0.000 943 482 0.005566 0.002900 G15 3 3 3324 1.86 0.268 ydjS b1744 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1745 56927 58184 -1.02 -0.009 37552 40697 -1.08 -0.035 57556 39124 0.339618 0.235551 I15 3 3 3325 1.44 0.159 b1745 b1745 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1746 211 340 -1.00 0.000 192 262 -1.00 0.000 276 227 0.001626 0.001366 L17 2 2 2470 1.00 0.000 b1746 b1746 putative aldehyde dehydrogenase Putative enzymes putative enzyme; Not classified b1747 3931 3232 1.22 0.085 2446 3035 -1.24 -0.094 3581 2740 0.021133 0.016499 K15 3 3 3326 1.28 0.108 b1747 b1747 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1748 2613 2332 1.12 0.049 953 1204 -1.26 -0.102 2473 1079 0.014589 0.006493 K17 4 2 1894 2.25 0.352 cstC b1748 acetylornithine delta-aminotransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b1749 1083 1056 1.03 0.011 1094 1103 -1.01 -0.003 1069 1099 0.006310 0.006614 I23 1 2 1629 -1.05 -0.020 xthA b1749 exonuclease III "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b1750 3722 3824 -1.03 -0.012 2288 2181 1.05 0.021 3773 2234 0.022261 0.013452 M15 3 3 3327 1.65 0.219 ydjX b1750 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1751 659 763 -1.16 -0.064 632 467 1.26 0.102 711 550 0.004198 0.003311 O15 3 3 3328 1.27 0.103 ydjY b1751 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1752 13222 12080 1.09 0.039 7325 7382 -1.01 -0.003 12651 7353 0.074650 0.044272 A17 3 3 3329 1.69 0.227 ydjZ b1752 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1753 293 427 -1.00 0.000 298 490 -1.00 0.000 360 394 0.002124 0.002373 C17 3 3 3330 -1.00 0.000 ynjA b1753 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1754 1614 1315 1.23 0.089 1031 1129 -1.10 -0.039 1465 1080 0.008643 0.006501 E17 3 3 3331 1.33 0.124 b1754 b1754 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1755 6835 6406 1.07 0.028 4390 4115 1.07 0.028 6620 4252 0.039065 0.025601 G17 3 3 3332 1.53 0.184 b1755 b1755 putative transport system permease protein Putative transport proteins putative transport; Not classified b1756 1577 1162 1.36 0.133 587 449 1.17 0.069 1369 518 0.008078 0.003119 J3 3 1 973 2.59 0.413 b1756 b1756 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1757 6132 6404 -1.04 -0.019 5458 5592 -1.02 -0.011 6268 5525 0.036988 0.033264 E12 3 2 2155 1.11 0.046 b1757 b1757 putative thiosulfate sulfur transferase Putative enzymes putative enzyme; Central intermediary metabolism: Sulfur metabolism b1758 612 639 -1.04 -0.018 474 468 1.00 0.000 626 471 0.003692 0.002834 L2 3 1 1350 1.23 0.090 b1758 b1758 putative cytochrome oxidase Putative enzymes putative enzyme; Not classified b1759 1492 1782 -1.19 -0.077 688 903 -1.31 -0.118 1637 795 0.009661 0.004789 G12 3 2 2156 2.02 0.305 b1759 b1759 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1760 4781 4097 1.17 0.067 4107 4396 -1.07 -0.030 4439 4252 0.026192 0.025598 I17 3 3 3333 1.02 0.010 b1760 b1760 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1761 4835 5420 -1.12 -0.050 1332 1710 -1.28 -0.109 5127 1521 0.030256 0.009156 M17 4 2 1895 3.30 0.519 gdhA b1761 NADP-specific glutamate dehydrogenase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Glutamate b1762 821 560 1.47 0.166 566 410 1.13 0.054 691 488 0.004076 0.002938 K17 3 3 3334 1.36 0.133 b1762 b1762 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1763 7243 6958 1.04 0.017 5718 5997 -1.05 -0.021 7101 5858 0.041899 0.035266 K1 1 2 1542 1.19 0.075 topB b1763 DNA topoisomerase III "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1764 1061 1415 -1.33 -0.125 1771 1970 -1.11 -0.046 1238 1870 0.007307 0.011261 E23 2 2 1723 -1.54 -0.188 selD b1764 "selenophosphate synthase, H(2)Se added to acrylyl-tRNA" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1765 1711 1742 -1.02 -0.008 1559 1653 -1.06 -0.025 1726 1606 0.010187 0.009667 M17 3 3 3335 1.05 0.023 ydjA b1765 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1766 1690 1776 -1.05 -0.022 2403 2752 -1.15 -0.059 1733 2577 0.010228 0.015516 G23 2 2 1724 -1.52 -0.181 sppA b1766 "protease IV, a signal peptide peptidase" Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b1767 3688 3985 -1.08 -0.034 3581 3902 -1.09 -0.037 3837 3741 0.022639 0.022526 O17 4 2 1896 1.01 0.002 ansA b1767 cytoplasmic L-asparaginase I Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b1768 37324 34111 1.09 0.039 42098 41518 1.01 0.006 35718 41808 0.210760 0.251708 O17 3 3 3336 -1.19 -0.077 ydjB b1768 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1769 2528 1241 2.04 0.309 1895 1912 -1.01 -0.004 1885 1904 0.011120 0.011462 A19 3 3 3337 -1.03 -0.013 ydjE b1769 putative transport protein Putative transport proteins putative transport; Not classified b1770 1373 1398 -1.02 -0.008 1165 1203 -1.03 -0.014 1386 1184 0.008178 0.007128 O7 3 1 224 1.15 0.060 b1770 b1770 putative DEOR-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1771 4669 4821 -1.03 -0.014 3056 3432 -1.12 -0.050 4745 3244 0.027998 0.019530 C19 3 3 3338 1.43 0.156 b1771 b1771 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1772 336 173 1.00 0.000 1 155 -1.00 0.000 255 78 0.001503 0.000472 I9 1 1 37 1.00 0.000 b1772 b1772 putative kinase Putative enzymes putative enzyme; Not classified b1773 1724 2257 -1.31 -0.117 1509 1447 1.04 0.018 1991 1478 0.011746 0.008897 N2 3 1 1351 1.32 0.121 b1773 b1773 putative aldolase Putative enzymes putative enzyme; Not classified b1774 478 513 -1.03 -0.011 374 473 -1.00 0.000 495 423 0.002922 0.002549 N17 2 2 2471 1.00 0.000 ydjJ b1774 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1775 415 216 1.00 0.000 354 58 1.00 0.000 315 206 0.001861 0.001238 E19 3 3 3339 1.00 0.000 b1775 b1775 putative transport protein Putative transport proteins putative transport; Not classified b1776 14399 14626 -1.02 -0.007 4997 5489 -1.10 -0.041 14512 5243 0.085633 0.031566 P17 2 2 2472 2.71 0.433 b1776 b1776 putative oxidoreductase Putative enzymes putative enzyme; Not classified b1777 1122 814 1.38 0.139 874 696 1.26 0.099 968 785 0.005711 0.004724 G19 3 3 3340 1.21 0.082 b1777 b1777 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1778 2061 1813 1.14 0.056 1186 1320 -1.11 -0.047 1937 1253 0.011431 0.007544 I19 3 3 3341 1.52 0.180 yeaA b1778 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1779 16220 12517 1.30 0.113 18682 20132 -1.08 -0.032 14369 19407 0.084785 0.116841 P2 3 1 1352 -1.38 -0.139 gapA b1779 glyceraldehyde-3-phosphate dehydrogenase A Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b1780 1418 1306 1.09 0.036 1355 1355 -1.00 0.000 1362 1355 0.008038 0.008157 K19 3 3 3342 -1.01 -0.006 yeaD b1780 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1781 222 487 -1.00 0.000 342 416 -1.00 0.000 354 379 0.002090 0.002281 B19 2 2 2473 -1.00 0.000 b1781 b1781 putative an aldehyde reductase Putative enzymes putative enzyme; Not classified b1782 1706 1572 1.09 0.036 5695 5097 1.12 0.048 1639 5396 0.009671 0.032488 M19 3 3 3343 -3.36 -0.526 yeaF b1782 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1783 8873 8210 1.08 0.034 6723 6608 1.02 0.007 8542 6665 0.050401 0.040128 O19 3 3 3344 1.26 0.099 yeaG b1783 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1784 5914 4806 1.23 0.090 3485 3431 1.02 0.007 5360 3458 0.031628 0.020820 A21 3 3 3345 1.52 0.182 yeaH b1784 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1785 2857 2419 1.18 0.072 1916 2077 -1.08 -0.035 2638 1996 0.015567 0.012018 C21 3 3 3346 1.30 0.112 yeaI b1785 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1786 977 702 1.39 0.143 884 823 1.07 0.031 839 853 0.004953 0.005137 E21 3 3 3347 -1.04 -0.016 yeaJ b1786 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1787 965 665 1.45 0.162 473 549 -1.10 -0.040 815 511 0.004811 0.003076 G21 3 3 3348 1.56 0.194 yeaK b1787 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1788 194 91 1.00 0.000 184 171 1.00 0.000 143 178 0.000843 0.001070 I21 3 3 3349 -1.00 0.000 b1788 b1788 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1789 471 456 1.00 0.000 337 303 1.00 0.000 464 320 0.002735 0.001928 K21 3 3 3350 1.00 0.000 yeaL b1789 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1790 4497 3971 1.13 0.054 7132 5735 1.24 0.095 4234 6434 0.024982 0.038735 M21 3 3 3351 -1.55 -0.190 yeaM b1790 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b1791 5888 5093 1.16 0.063 8643 8202 1.05 0.023 5491 8422 0.032398 0.050707 O21 3 3 3352 -1.57 -0.195 yeaN b1791 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b1792 1125 866 1.30 0.114 844 1072 -1.27 -0.104 995 958 0.005873 0.005765 A23 3 3 3353 1.02 0.008 yeaO b1792 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1793 2020 1568 1.29 0.110 1082 1054 1.03 0.011 1794 1068 0.010586 0.006431 C23 3 3 3354 1.65 0.216 yoaF b1793 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1794 1633 1739 -1.07 -0.027 531 452 1.06 0.026 1686 492 0.009948 0.002961 E23 3 3 3355 3.32 0.521 yeaP b1794 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1795 6436 4992 1.29 0.110 525 640 -1.22 -0.086 5714 583 0.033715 0.003509 G23 3 3 3356 9.61 0.983 yeaQ b1795 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1796 191 38 1.00 0.000 56 89 -1.00 0.000 114 73 0.000675 0.000437 I23 3 3 3357 1.00 0.000 yoaG b1796 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1797 1858 1518 1.22 0.088 662 793 -1.20 -0.078 1688 728 0.009959 0.004382 K23 3 3 3358 2.27 0.357 yeaR b1797 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1798 2612 1783 1.46 0.166 3560 3694 -1.04 -0.016 2198 3627 0.012968 0.021837 M23 3 3 3359 -1.68 -0.226 yeaS b1798 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1799 863 842 1.03 0.011 575 697 -1.21 -0.084 853 636 0.005031 0.003827 A9 3 1 225 1.31 0.119 yeaT b1799 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b1800 970 516 1.88 0.274 6321 5177 1.22 0.087 743 5749 0.004385 0.034612 A19 4 2 1897 -7.89 -0.897 yeaU b1800 putative tartrate dehydrogenase Putative enzymes putative enzyme; Not classified b1801 2616 3323 -1.27 -0.104 3659 3937 -1.08 -0.032 2969 3798 0.017522 0.022867 L3 3 1 974 -1.31 -0.116 yeaV b1801 putative transport protein Putative transport proteins putative transport; Not classified b1802 5533 4873 1.14 0.055 8060 7424 1.09 0.036 5203 7742 0.030701 0.046610 O23 3 3 3360 -1.52 -0.181 yeaW b1802 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1803 316 835 -1.67 -0.223 433 652 -1.30 -0.116 575 543 0.003395 0.003267 D19 2 2 2474 1.04 0.017 yeaX b1803 putative diogenase beta subunit Putative enzymes putative enzyme; Not classified b1804 644 468 1.29 0.110 606 570 1.06 0.026 556 588 0.003280 0.003540 M1 1 2 1543 -1.08 -0.033 rnd b1804 "RNase D, processes tRNA precursor" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b1805 378 588 -1.18 -0.070 852 884 -1.04 -0.016 483 868 0.002849 0.005225 K12 2 2 2062 -1.74 -0.241 fadD b1805 "acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase" Fatty acid and phospholipid metabolism enzyme; Degradation of small molecules: Fatty acids b1806 402 344 1.00 0.000 676 515 1.31 0.118 373 595 0.002200 0.003585 H10 2 3 3361 -1.20 -0.077 b1806 b1806 putative outer membrane protein putative membrane protein putative membrane; Not classified b1807 3068 4154 -1.35 -0.132 3194 3699 -1.16 -0.064 3611 3447 0.021308 0.020750 C1 4 3 3362 1.03 0.012 yeaZ b1807 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1808 536 474 1.07 0.030 269 345 -1.00 0.000 505 307 0.002980 0.001846 O1 1 2 1544 1.00 0.000 b1808 b1808 putative enzyme Putative enzymes putative enzyme; Not classified b1809 423 1377 -2.75 -0.440 1536 1601 -1.04 -0.018 900 1568 0.005310 0.009442 E1 4 3 3363 -1.78 -0.250 b1809 b1809 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1810 2530 2787 -1.10 -0.042 963 1261 -1.31 -0.117 2659 1112 0.015688 0.006697 G1 4 3 3364 2.34 0.370 b1810 b1810 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1811 451 1237 -2.47 -0.393 575 744 -1.29 -0.112 844 659 0.004978 0.003970 I1 4 3 3365 1.25 0.098 b1811 b1811 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1812 797 585 1.36 0.134 498 578 -1.16 -0.063 691 538 0.004076 0.003240 N5 1 2 2327 1.26 0.100 pabB b1812 "p-aminobenzoate synthetase, component I" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b1813 846 727 1.16 0.066 839 797 1.05 0.022 786 818 0.004639 0.004922 K1 4 3 3366 -1.06 -0.026 yeaB b1813 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1814 577 729 -1.26 -0.101 1186 1350 -1.14 -0.056 653 1268 0.003855 0.007636 C19 4 2 1898 -1.98 -0.297 sdaA b1814 L-serine deaminase Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b1815 177 207 -1.00 0.000 2081 1312 1.59 0.200 192 1697 0.001134 0.010214 M1 4 3 3367 -3.40 -0.532 b1815 b1815 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1816 6606 6613 -1.00 0.000 6768 8209 -1.21 -0.084 6609 7488 0.039000 0.045085 O1 4 3 3368 -1.16 -0.063 yoaE b1816 putative transport protein Putative transport proteins putative transport; Not classified b1817 2613 3368 -1.29 -0.110 1791 1854 -1.03 -0.015 2991 1822 0.017648 0.010971 M18 4 1 743 1.61 0.206 manX b1817 "PTS enzyme IIAB, mannose-specific" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1818 2096 2338 -1.12 -0.047 1376 1289 1.07 0.029 2217 1332 0.013083 0.008022 O18 4 1 744 1.63 0.212 manY b1818 "PTS enzyme IIC, mannose-specific" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1819 14161 12862 1.10 0.042 14082 15304 -1.09 -0.036 13511 14693 0.079726 0.088459 A20 4 1 745 -1.11 -0.045 manZ b1819 "PTS enzyme IID, mannose-specific" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1820 143 222 -1.00 0.000 425 316 1.00 0.000 183 370 0.001078 0.002230 A3 4 3 3369 -1.00 0.000 b1820 b1820 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1821 2320 2287 1.01 0.006 3178 3116 1.02 0.009 2303 3147 0.013592 0.018948 C3 4 3 3370 -1.39 -0.144 b1821 b1821 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1822 342 360 -1.00 0.000 213 653 -1.31 -0.116 351 433 0.002071 0.002607 E3 4 3 3371 -1.00 0.000 yebH b1822 putative enzyme Putative enzymes putative enzyme; Not classified b1823 8999 8726 1.03 0.013 16347 16960 -1.04 -0.016 8862 16654 0.052293 0.100265 B13 4 2 2641 -1.92 -0.283 cspC b1823 cold shock protein Cell processes phenotype; Not classified b1824 2163 2460 -1.14 -0.056 1613 2826 -1.75 -0.243 2312 2220 0.013640 0.013365 G3 4 3 3372 1.02 0.009 b1824 b1824 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1825 484 488 -1.00 0.000 304 578 -1.16 -0.063 486 441 0.002867 0.002655 I3 4 3 3373 1.00 0.000 b1825 b1825 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1826 248 340 -1.00 0.000 335 399 -1.00 0.000 294 367 0.001733 0.002208 K3 4 3 3374 -1.00 0.000 b1826 b1826 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1827 2292 2288 1.00 0.001 1919 1817 1.06 0.024 2290 1868 0.013511 0.011246 C9 3 1 226 1.20 0.080 b1827 b1827 putative regulator Putative regulatory proteins putative regulator; Not classified b1828 1965 2102 -1.07 -0.029 1269 1540 -1.21 -0.084 2034 1404 0.012001 0.008454 B4 1 1 1161 1.42 0.152 b1828 b1828 putative transport protein Putative transport proteins putative transport; Not classified b1829 3876 3794 1.02 0.009 2586 2884 -1.12 -0.047 3835 2735 0.022630 0.016466 D4 1 1 1162 1.37 0.138 htpX b1829 "heat shock protein, integral membrane protein" Cell processes "orf; Adaptations, atypical conditions" b1830 19539 17800 1.10 0.041 33698 35338 -1.05 -0.021 18670 34518 0.110163 0.207818 I23 2 2 1725 -1.89 -0.276 prc b1830 carboxy-terminal protease for penicillin-binding protein 3 Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b1831 250 300 -1.00 0.000 223 477 -1.00 0.000 275 350 0.001625 0.002107 M3 4 3 3375 -1.00 0.000 yebJ b1831 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1832 1273 1762 -1.38 -0.141 723 873 -1.21 -0.082 1518 798 0.008956 0.004807 O3 4 3 3376 1.86 0.270 b1832 b1832 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1833 2914 2796 1.04 0.018 3373 3961 -1.17 -0.070 2855 3667 0.016847 0.022076 A5 4 3 3377 -1.31 -0.117 b1833 b1833 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1834 2388 2797 -1.17 -0.069 3643 3566 1.02 0.009 2592 3605 0.015297 0.021702 C5 4 3 3378 -1.42 -0.152 b1834 b1834 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1835 1003 636 1.58 0.198 924 550 1.68 0.225 819 737 0.004833 0.004435 G8 3 1 604 1.09 0.037 yebU b1835 putative nucleolar proteins Putative cell structure putative structure; Not classified b1836 3395 2937 1.16 0.063 214 310 -1.00 0.000 3166 262 0.018684 0.001577 E5 4 3 3379 6.23 0.794 b1836 b1836 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1837 942 802 1.17 0.070 503 504 -1.00 -0.001 872 503 0.005145 0.003030 G5 4 3 3380 1.70 0.230 b1837 b1837 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1838 359 209 1.00 0.000 217 98 1.00 0.000 284 158 0.001675 0.000949 I5 4 3 3381 1.00 0.000 pphA b1838 "protein phosphatase 1 modulates phosphoproteins, signals protein misfolding" Regulatory function regulator; Not classified b1839 737 761 -1.03 -0.014 793 579 1.37 0.137 749 686 0.004420 0.004130 K5 4 3 3382 1.07 0.029 b1839 b1839 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1840 1904 1160 1.64 0.215 1620 1268 1.28 0.106 1532 1444 0.009040 0.008695 F4 1 1 1163 1.04 0.017 b1840 b1840 putative resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b1841 550 642 -1.17 -0.067 567 393 1.13 0.055 596 480 0.003516 0.002892 M5 4 3 3383 1.17 0.069 b1841 b1841 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1842 1679 2078 -1.24 -0.093 1450 1775 -1.22 -0.088 1879 1613 0.011085 0.009710 A3 1 2 1545 1.14 0.058 holE b1842 "DNA polymerase III, theta subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1843 525 380 1.05 0.021 470 391 1.00 0.000 453 430 0.002671 0.002591 O5 4 3 3384 1.00 0.000 b1843 b1843 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1844 330 598 -1.20 -0.078 203 333 -1.00 0.000 464 268 0.002739 0.001614 A7 4 3 3385 1.00 0.000 b1844 b1844 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1845 -32 81 -1.00 0.000 -100 63 -1.00 0.000 24 -18 0.000143 -0.000109 K23 2 2 1726 1.00 0.000 ptrB b1845 protease II Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b1846 196 500 -1.00 0.000 458 462 -1.00 0.000 348 460 0.002055 0.002769 C7 4 3 3386 -1.00 0.000 yebE b1846 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1847 10707 8657 1.24 0.092 7852 7892 -1.01 -0.002 9682 7872 0.057131 0.047393 E7 4 3 3387 1.21 0.081 yebF b1847 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1848 805 1075 -1.34 -0.126 1501 1269 1.18 0.073 940 1385 0.005548 0.008337 G7 4 3 3388 -1.50 -0.177 yebG b1848 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1849 2325 3101 -1.33 -0.125 2002 1805 1.11 0.045 2713 1903 0.016007 0.011458 O22 1 2 2008 1.40 0.145 purT b1849 phosphoribosylglycinamide formyltransferase 2 Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b1850 1418 429 2.84 0.453 1526 692 2.20 0.343 924 1109 0.005450 0.006679 I12 3 2 2157 -1.23 -0.088 eda b1850 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase Central intermediary metabolism enzyme; Central intermediary metabolism: Entner-Douderoff b1851 1241 987 1.26 0.100 1543 1542 1.00 0.000 1114 1543 0.006572 0.009288 K12 3 2 2158 -1.41 -0.150 edd b1851 6-phosphogluconate dehydratase Central intermediary metabolism enzyme; Central intermediary metabolism: Entner-Douderoff b1852 5882 4863 1.21 0.083 2055 1254 1.64 0.214 5372 1654 0.031699 0.009961 B4 3 1 1353 3.18 0.503 zwf b1852 glucose-6-phosphate dehydrogenase Central intermediary metabolism "enzyme; Energy metabolism, carbon: Oxidative branch, pentose pathway" b1853 360 180 1.00 0.000 184 189 -1.00 0.000 270 187 0.001594 0.001124 I7 4 3 3389 1.00 0.000 yebK b1853 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1854 2685 2285 1.18 0.070 1726 1452 1.19 0.075 2485 1589 0.014663 0.009566 D4 3 1 1354 1.53 0.186 pykA b1854 "pyruvate kinase II, glucose stimulated" Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b1855 1657 1474 1.12 0.051 1101 958 1.15 0.060 1565 1029 0.009237 0.006198 H4 1 1 1164 1.49 0.173 msbB b1855 "suppressor of htrB, heat shock protein" Putative factors "putative factor; Adaptations, atypical conditions" b1856 7002 6049 1.16 0.064 9435 10783 -1.14 -0.058 6526 10109 0.038506 0.060861 K7 4 3 3390 -1.58 -0.199 yebA b1856 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1857 941 890 1.06 0.024 1973 2191 -1.11 -0.045 916 2082 0.005403 0.012533 M7 4 3 3391 -2.32 -0.365 yebL b1857 putative adhesin Putative factors putative factor; Not classified b1858 1037 716 1.45 0.161 1312 1186 1.11 0.044 877 1249 0.005173 0.007519 O7 4 3 3392 -1.45 -0.162 yebM b1858 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1859 1214 1290 -1.06 -0.026 1271 1381 -1.09 -0.036 1252 1326 0.007385 0.007983 A9 4 3 3393 -1.08 -0.034 yebI b1859 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1860 1954 1881 1.04 0.017 1317 1398 -1.06 -0.026 1918 1357 0.011315 0.008172 C3 1 2 1546 1.38 0.141 ruvB b1860 Holliday junction helicase subunit A; branch migration; repair "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1861 365 238 1.00 0.000 169 336 -1.00 0.000 302 252 0.001782 0.001520 E3 1 2 1547 1.00 0.000 ruvA b1861 Holliday junction helicase subunit B; branch migration; repair "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1862 2301 2034 1.13 0.054 1479 1393 1.06 0.026 2167 1436 0.012789 0.008646 C9 4 3 3394 1.48 0.170 yebB b1862 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1863 10686 8346 1.28 0.107 10494 10495 -1.00 0.000 9516 10495 0.056149 0.063183 G3 1 2 1548 -1.13 -0.051 ruvC b1863 Holliday junction nuclease; resolution of structures; repair "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1864 1638 1324 1.24 0.092 2506 2703 -1.08 -0.033 1481 2605 0.008741 0.015681 E9 4 3 3395 -1.79 -0.254 yebC b1864 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1865 766 691 1.11 0.044 803 786 1.02 0.010 729 794 0.004299 0.004782 M12 3 2 2159 -1.11 -0.046 ntpA b1865 dATP pyrophosphohydrolase Central intermediary metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b1866 4530 4704 -1.04 -0.016 6205 6743 -1.09 -0.036 4617 6474 0.027244 0.038977 M23 2 2 1727 -1.43 -0.156 aspS b1866 aspartate tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1867 1330 1676 -1.26 -0.100 1244 1520 -1.22 -0.087 1503 1382 0.008870 0.008319 G9 4 3 3396 1.07 0.028 yecD b1867 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1868 551 433 1.10 0.042 459 602 -1.20 -0.081 492 531 0.002905 0.003196 I9 4 3 3397 -1.07 -0.028 yecE b1868 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1869 231 142 1.00 0.000 113 270 -1.00 0.000 187 192 0.001101 0.001153 K9 4 3 3398 -1.00 0.000 yecN b1869 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1870 490 846 -1.69 -0.228 649 804 -1.24 -0.093 668 726 0.003942 0.004373 M9 4 3 3399 -1.11 -0.045 yecO b1870 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1871 2864 2305 1.24 0.094 2418 2597 -1.07 -0.031 2585 2508 0.015251 0.015098 O9 4 3 3400 1.01 0.004 yecP b1871 putative enzyme Putative enzymes putative enzyme; Not classified b1872 828 337 1.66 0.219 895 517 1.73 0.238 582 706 0.003437 0.004248 O12 3 2 2160 -1.24 -0.092 bisZ b1872 biotin sulfoxide reductase 2 Central intermediary metabolism enzyme; Central intermediary metabolism b1873 2006 1502 1.34 0.126 636 656 -1.03 -0.014 1754 646 0.010350 0.003887 F4 3 1 1355 2.66 0.425 yecK b1873 putative cytochrome C-type protein Putative enzymes putative enzyme; Not classified b1874 4978 4398 1.13 0.054 2508 2413 1.04 0.017 4688 2461 0.027661 0.014814 J4 1 1 1165 1.87 0.271 cutC b1874 copper homeostasis protein Putative transport proteins putative transport; Detoxification b1875 576 688 -1.19 -0.077 669 750 -1.12 -0.050 632 709 0.003730 0.004270 A11 4 3 3401 -1.14 -0.059 yecM b1875 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1876 1702 2402 -1.41 -0.150 3720 4043 -1.09 -0.036 2052 3882 0.012106 0.023369 O23 2 2 1728 -1.93 -0.286 argS b1876 arginine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b1877 106 93 1.00 0.000 192 178 1.00 0.000 100 185 0.000587 0.001113 C11 4 3 3402 -1.00 0.000 yecT b1877 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1878 156 338 -1.00 0.000 163 437 -1.00 0.000 247 300 0.001457 0.001805 E11 4 3 3403 -1.00 0.000 flhE b1878 flagellar protein Cell processes structural component; Surface structures b1879 26499 28638 -1.08 -0.034 22417 22235 1.01 0.004 27569 22326 0.162675 0.134415 E22 1 1 467 1.21 0.083 flhA b1879 flagellar biosynthesis; possible export of flagellar proteins Cell processes structural component; Surface structures b1880 10576 10588 -1.00 0.000 5486 5211 1.05 0.022 10582 5349 0.062439 0.032202 L4 1 1 1166 1.94 0.288 flhB b1880 putative part of export apparatus for flagellar proteins Cell processes structural component; Not classified b1881 1473 1845 -1.25 -0.098 1249 1051 1.19 0.075 1659 1150 0.009788 0.006924 N4 1 1 1167 1.41 0.150 cheZ b1881 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator Regulatory function regulator; Chemotaxis and mobility b1882 662 605 1.09 0.039 340 241 1.00 0.000 634 290 0.003739 0.001749 P4 1 1 1168 1.25 0.096 cheY b1882 chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components Regulatory function regulator; Chemotaxis and mobility b1883 2209 1926 1.15 0.059 2018 1497 1.35 0.130 2068 1757 0.012201 0.010580 B6 1 1 1169 1.15 0.062 cheB b1883 response regulator for chemotaxis (cheA sensor); protein methylesterase Cell processes enzyme; Chemotaxis and mobility b1884 1701 1674 1.02 0.007 839 835 1.00 0.002 1687 837 0.009955 0.005039 D6 1 1 1170 1.98 0.296 cheR b1884 response regulator for chemotaxis; protein glutamate methyltransferase Cell processes enzyme; Chemotaxis and mobility b1885 2438 2123 1.15 0.060 1068 906 1.18 0.071 2280 987 0.013455 0.005941 F6 1 1 1171 2.26 0.355 tap b1885 "methyl-accepting chemotaxis protein IV, peptide sensor receptor" Regulatory function regulator; Chemotaxis and mobility b1886 9534 10121 -1.06 -0.026 3314 3321 -1.00 -0.001 9827 3318 0.057988 0.019974 H6 1 1 1172 2.90 0.463 tar b1886 "methyl-accepting chemotaxis protein II, aspartate sensor receptor" Regulatory function regulator; Chemotaxis and mobility b1887 15604 14673 1.06 0.027 11832 11609 1.02 0.008 15138 11720 0.089327 0.070563 J6 1 1 1173 1.27 0.102 cheW b1887 positive regulator of CheA protein activity Regulatory function regulator; Chemotaxis and mobility b1888 2770 2984 -1.08 -0.032 2181 3322 -1.52 -0.183 2877 2752 0.016975 0.016567 L6 1 1 1174 1.02 0.011 cheA b1888 sensory transducer kinase between chemo- signal receptors and CheB and CheY Cell processes enzyme; Chemotaxis and mobility b1889 2914 3504 -1.20 -0.080 2487 2250 1.11 0.043 3209 2368 0.018935 0.014259 N6 1 1 1175 1.33 0.123 motB b1889 "enables flagellar motor rotation, linking torque machinery to cell wall" Cell processes structural component; Chemotaxis and mobility b1890 9088 8795 1.03 0.014 3335 2786 1.20 0.078 8942 3061 0.052762 0.018426 P6 1 1 1176 2.86 0.457 motA b1890 proton conductor component of motor; no effect on switching Cell processes phenotype; Chemotaxis and mobility b1891 315 340 -1.00 0.000 321 154 1.00 0.000 327 237 0.001932 0.001429 G22 1 1 468 1.00 0.000 flhC b1891 regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor? Regulatory function regulator; Surface structures b1892 3115 3191 -1.02 -0.010 3726 3557 1.05 0.020 3153 3641 0.018606 0.021922 I22 1 1 469 -1.18 -0.071 flhD b1892 "regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor?" Regulatory function regulator; Surface structures b1893 1252 1166 1.07 0.031 1435 1690 -1.18 -0.071 1209 1563 0.007132 0.009408 A19 4 1 361 -1.32 -0.120 insB_5 b1893 IS1 protein InsB "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1894 21079 22387 -1.06 -0.026 17985 18037 -1.00 -0.001 21733 18011 0.128239 0.108436 C19 4 1 362 1.18 0.073 insA_5 b1894 IS1 protein InsA "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1895 330 361 -1.00 0.000 96 33 1.00 0.000 346 64 0.002041 0.000388 G11 4 3 3404 1.00 0.000 yecG b1895 putative regulator Putative regulatory proteins putative regulator; Not classified b1896 1843 1819 1.01 0.006 313 360 -1.00 0.000 1831 336 0.010804 0.002025 B8 1 1 1177 3.60 0.556 otsA b1896 trehalose-6-phosphate synthase Cell processes enzyme; Osmotic adaptation b1897 3264 2824 1.16 0.063 355 334 1.00 0.000 3044 345 0.017962 0.002076 D8 1 1 1178 5.99 0.777 otsB b1897 "trehalose-6-phosphate phophatase, biosynthetic" Cell processes enzyme; Osmotic adaptation b1898 1052 901 1.17 0.067 575 576 -1.00 -0.001 977 576 0.005763 0.003466 C20 4 1 746 1.66 0.221 araH_2 b1898 "high-affinity L-arabinose transport system; membrane protein, fragment 2" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1899 1087 909 1.20 0.078 785 1078 -1.37 -0.138 998 931 0.005888 0.005608 I11 4 3 3405 1.05 0.021 araH_1 b1899 "high-affinity L-arabinose transport system; membrane protein, interrupted" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1900 515 475 1.03 0.013 423 670 -1.34 -0.127 495 547 0.002921 0.003291 E20 4 1 747 -1.10 -0.040 araG b1900 ATP-binding component of high-affinity L-arabinose transport system Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1901 279 305 -1.00 0.000 188 297 -1.00 0.000 292 243 0.001723 0.001461 G20 4 1 748 1.00 0.000 araF b1901 L-arabinose-binding periplasmic protein Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b1902 1088 924 1.18 0.071 1690 1851 -1.10 -0.040 1006 1771 0.005936 0.010660 K11 4 3 3406 -1.80 -0.254 yecI b1902 ferritin-like protein Putative transport proteins putative carrier; Transport of small molecules: Cations b1903 475 545 -1.09 -0.038 1190 1172 1.02 0.007 510 1181 0.003011 0.007111 M11 4 3 3407 -2.36 -0.373 b1903 b1903 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1904 411 336 1.00 0.000 536 485 1.07 0.030 374 510 0.002206 0.003073 O11 4 3 3408 -1.02 -0.010 b1904 b1904 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1905 1197 1267 -1.06 -0.025 1860 1926 -1.04 -0.015 1232 1893 0.007271 0.011395 I20 4 1 749 -1.57 -0.195 ftn b1905 cytoplasmic ferritin (an iron storage protein) Transport and binding proteins carrier; Transport of small molecules: Cations b1906 -1 122 -1.00 0.000 151 188 -1.00 0.000 60 169 0.000356 0.001020 A13 4 3 3409 -1.00 0.000 yecH b1906 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1907 1910 2136 -1.12 -0.048 2331 2606 -1.12 -0.048 2023 2469 0.011937 0.014864 K20 4 1 750 -1.25 -0.095 tyrP b1907 tyrosine-specific transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b1908 203 394 -1.00 0.000 65 154 -1.00 0.000 298 110 0.001760 0.000660 C13 4 3 3410 1.00 0.000 yecA b1908 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1912 962 841 1.14 0.058 750 728 1.03 0.013 901 739 0.005319 0.004448 M12 2 2 2063 1.20 0.078 pgsA b1912 "phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase" Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b1913 1649 1820 -1.10 -0.043 1158 1134 1.02 0.009 1735 1146 0.010236 0.006900 K23 1 2 1630 1.48 0.171 uvrC b1913 "excinuclease ABC, subunit C; repair of UV damage to DNA" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b1914 2205 1726 1.28 0.106 1357 1310 1.04 0.015 1966 1333 0.011601 0.008026 E9 3 1 227 1.45 0.160 uvrY b1914 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1915 -57 42 -1.00 0.000 268 295 -1.00 0.000 -8 282 -0.000044 0.001695 E13 4 3 3411 -1.00 0.000 yecF b1915 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1916 6370 6422 -1.01 -0.004 2580 2495 1.03 0.015 6396 2537 0.037741 0.015276 F8 1 1 1179 2.47 0.393 sdiA b1916 transcriptional regulator of ftsQAZ gene cluster Regulatory function regulator; Cell division b1917 258 633 -1.27 -0.102 165 198 -1.00 0.000 445 182 0.002627 0.001095 G13 4 3 3412 1.00 0.000 yecC b1917 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b1918 1552 1192 1.30 0.115 700 809 -1.15 -0.063 1372 755 0.008097 0.004544 I13 4 3 3413 1.78 0.251 yecS b1918 putative transport system permease protein (former yecC) Putative transport proteins putative transport; Not classified b1919 2169 3067 -1.41 -0.150 2661 3131 -1.18 -0.071 2618 2896 0.015450 0.017433 F19 2 2 2475 -1.13 -0.052 yedO b1919 putative 1-aminocyclopropane-1-carboxylate deaminase Putative enzymes putative enzyme; Not classified b1920 14482 11361 1.27 0.105 1977 1824 1.08 0.035 12921 1900 0.076244 0.011442 H8 1 1 1180 6.66 0.824 fliY b1920 putative periplasmic binding transport protein Putative transport proteins putative transport; Not classified b1921 252 203 1.00 0.000 266 164 1.00 0.000 228 215 0.001344 0.001292 K13 4 3 3414 1.00 0.000 fliZ b1921 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" structural component; Unknown b1922 351 334 1.00 0.000 261 266 -1.00 0.000 343 263 0.002022 0.001585 K22 1 1 470 1.00 0.000 fliA b1922 flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons Regulatory function factor; Surface structures b1923 1973 1781 1.11 0.044 1034 1048 -1.01 -0.006 1877 1041 0.011078 0.006268 M22 1 1 471 1.77 0.247 fliC b1923 "flagellar biosynthesis; flagellin, filament structural protein" Cell processes structural component; Surface structures b1924 278 299 -1.00 0.000 395 526 -1.05 -0.022 288 461 0.001701 0.002773 O22 1 1 472 -1.00 0.000 fliD b1924 flagellar biosynthesis; filament capping protein; enables filament assembly Cell processes putative structure; Surface structures b1925 387 469 -1.00 0.000 800 650 1.23 0.090 428 725 0.002527 0.004364 J2 2 3 473 -1.45 -0.163 fliS b1925 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) Regulatory function regulator; Surface structures b1926 414 231 1.00 0.000 234 274 -1.00 0.000 322 254 0.001903 0.001527 C24 1 1 474 1.00 0.000 fliT b1926 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) Regulatory function regulator; Surface structures b1927 5076 5075 1.00 0.000 1092 989 1.10 0.043 5075 1041 0.029948 0.006265 K9 1 1 38 4.78 0.679 amyA b1927 cytoplasmic alpha-amylase Carbon compound catabolism enzyme; Degradation of polysaccharides b1928 476 536 -1.07 -0.030 1546 1738 -1.12 -0.051 506 1642 0.002984 0.009885 M13 4 3 3415 -3.29 -0.518 yedD b1928 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1929 1153 1004 1.15 0.060 890 1012 -1.14 -0.056 1078 951 0.006363 0.005727 O13 4 3 3416 1.11 0.046 yedE b1929 putative transport system permease protein Putative transport proteins putative transport; Not classified b1930 24 -27 1.00 0.000 40 94 -1.00 0.000 -1 67 -0.000009 0.000404 A15 4 3 3417 -1.00 0.000 yedF b1930 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1931 1006 923 1.09 0.037 445 552 -1.10 -0.043 964 498 0.005689 0.003001 C15 4 3 3418 1.90 0.278 yedK b1931 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1932 229 218 1.00 0.000 123 80 1.00 0.000 224 102 0.001319 0.000612 E15 4 3 3419 1.00 0.000 yedL b1932 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1933 80 30 1.00 0.000 35 156 -1.00 0.000 55 95 0.000324 0.000573 G15 4 3 3420 -1.00 0.000 b1933 b1933 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1934 2368 977 2.42 0.385 984 350 1.97 0.294 1672 667 0.009869 0.004014 I15 4 3 3421 2.46 0.391 yedN b1934 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1935 64 197 -1.00 0.000 94 314 -1.00 0.000 131 204 0.000770 0.001228 K15 4 3 3422 -1.00 0.000 yedM b1935 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1936 623 678 -1.09 -0.037 668 655 1.02 0.009 651 662 0.003839 0.003983 M15 4 3 3423 -1.04 -0.016 b1936 b1936 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1937 95 63 1.00 0.000 105 15 1.00 0.000 79 60 0.000469 0.000359 E24 1 1 475 1.00 0.000 fliE b1937 "flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction" Cell processes structural component; Surface structures b1938 443 404 1.00 0.000 527 439 1.05 0.022 423 483 0.002499 0.002908 G24 1 1 476 -1.00 0.000 fliF b1938 flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein Cell processes structural component; Surface structures b1939 1183 1088 1.09 0.036 1145 1159 -1.01 -0.006 1136 1152 0.006703 0.006935 I24 1 1 477 -1.03 -0.015 fliG b1939 "flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction" Cell processes structural component; Surface structures b1940 4369 3739 1.17 0.068 4143 3571 1.16 0.065 4054 3857 0.023920 0.023220 K24 1 1 478 1.03 0.013 fliH b1940 flagellar biosynthesis; export of flagellar proteins? Cell processes transport; Surface structures b1941 319 278 1.00 0.000 177 157 1.00 0.000 299 167 0.001763 0.001008 J8 1 1 1181 1.00 0.000 fliI b1941 flagellum-specific ATP synthase Cell processes enzyme; Surface structures b1942 3560 3284 1.08 0.035 1962 2085 -1.06 -0.026 3422 2023 0.020191 0.012180 L8 1 1 1182 1.66 0.220 fliJ b1942 flagellar fliJ protein Cell processes structural component; Surface structures b1943 1289 1562 -1.21 -0.083 819 993 -1.21 -0.083 1426 906 0.008412 0.005456 N8 1 1 1183 1.54 0.188 fliK b1943 flagellar hook-length control protein Cell processes structural component; Surface structures b1944 223 143 1.00 0.000 297 199 1.00 0.000 183 248 0.001079 0.001495 M24 1 1 479 -1.00 0.000 fliL b1944 flagellar biosynthesis Cell processes putative structure; Surface structures b1945 644 331 1.29 0.110 639 743 -1.16 -0.066 487 691 0.002875 0.004162 O24 1 1 480 -1.39 -0.142 fliM b1945 "flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction" Cell processes structural component; Surface structures b1946 1313 1461 -1.11 -0.046 957 1111 -1.16 -0.065 1387 1034 0.008183 0.006225 A2 2 1 481 1.31 0.119 fliN b1946 "flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction" Cell processes structural component; Surface structures b1947 -177 369 -1.00 0.000 -56 450 -1.00 0.000 96 197 0.000567 0.001187 C2 2 1 482 -1.00 0.000 fliO b1947 flagellar biosynthesis Cell processes putative structure; Surface structures b1948 997 1100 -1.10 -0.043 254 625 -1.25 -0.097 1048 440 0.006184 0.002646 E2 2 1 483 2.06 0.314 fliP b1948 flagellar biosynthesis Cell processes putative structure; Surface structures b1949 843 554 1.52 0.183 365 511 -1.02 -0.010 698 438 0.004122 0.002636 G2 2 1 484 1.37 0.138 fliQ b1949 flagellar biosynthesis Cell processes putative structure; Surface structures b1950 1996 1824 1.09 0.039 1467 1817 -1.24 -0.093 1910 1642 0.011270 0.009885 I2 2 1 485 1.14 0.057 fliR b1950 flagellar biosynthesis Cell processes putative enzyme; Surface structures b1951 111 373 -1.00 0.000 -138 245 -1.00 0.000 242 53 0.001429 0.000322 K2 2 1 486 1.00 0.000 rcsA b1951 "positive regulator for ctr capsule biosynthesis, positive transcription factor" Regulatory function regulator; Surface polysaccharides & antigens b1952 983 956 1.03 0.012 417 376 1.00 0.000 969 397 0.005719 0.002389 O15 4 3 3424 1.91 0.280 dsrB b1952 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1953 8 170 -1.00 0.000 32 155 -1.00 0.000 89 93 0.000527 0.000562 A17 4 3 3425 -1.00 0.000 b1953 b1953 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1955 606 595 1.02 0.008 261 292 -1.00 0.000 600 277 0.003542 0.001665 C17 4 3 3426 1.18 0.072 b1955 b1955 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1956 584 895 -1.53 -0.185 593 606 -1.02 -0.010 740 600 0.004364 0.003611 E17 4 3 3427 1.21 0.082 b1956 b1956 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1957 39109 34964 1.12 0.049 31147 34428 -1.11 -0.044 37036 32787 0.218539 0.197398 G17 4 3 3428 1.11 0.044 b1957 b1957 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1958 1949 1752 1.11 0.046 1369 1426 -1.04 -0.018 1850 1398 0.010918 0.008414 I17 4 3 3429 1.30 0.113 yedI b1958 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1959 1287 1193 1.08 0.033 832 952 -1.14 -0.058 1240 892 0.007318 0.005373 K17 4 3 3430 1.36 0.134 yedA b1959 putative transmembrane subunit putative membrane protein putative membrane; Not classified b1960 2195 2002 1.10 0.040 1803 1685 1.07 0.029 2098 1744 0.012380 0.010502 M23 1 2 1631 1.18 0.071 vsr b1960 "DNA mismatch endonuclease, patch repair protein" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b1961 1662 2021 -1.22 -0.085 1674 1641 1.02 0.009 1841 1657 0.010866 0.009979 I3 1 2 1549 1.09 0.037 dcm b1961 DNA cytosine methylase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b1962 831 705 1.18 0.071 445 425 1.00 0.000 768 435 0.004532 0.002621 M17 4 3 3431 1.51 0.179 yedJ b1962 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1963 2598 1537 1.69 0.228 1945 1825 1.07 0.028 2068 1885 0.012201 0.011348 O17 4 3 3432 1.08 0.031 b1963 b1963 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1964 -21 74 -1.00 0.000 98 83 1.00 0.000 27 90 0.000158 0.000545 A19 4 3 3433 -1.00 0.000 b1964 b1964 putative outer membrane protein putative membrane protein putative membrane; Not classified b1965 -68 33 -1.00 0.000 -103 26 -1.00 0.000 -17 -39 -0.000103 -0.000233 C19 4 3 3434 1.00 0.000 b1965 b1965 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1966 2723 2219 1.23 0.089 3572 3713 -1.04 -0.017 2471 3643 0.014580 0.021932 E19 4 3 3435 -1.50 -0.177 b1966 b1966 putative outer membrane protein putative membrane protein putative membrane; Not classified b1967 11676 11026 1.06 0.025 10123 11194 -1.11 -0.044 11351 10658 0.066980 0.064169 G19 4 3 3436 1.04 0.019 yedU b1967 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1968 287 306 -1.00 0.000 187 261 -1.00 0.000 296 224 0.001749 0.001347 I19 4 3 3437 1.00 0.000 yedV b1968 putative 2-component sensor protein Putative regulatory proteins putative regulator; Not classified b1969 357 216 1.00 0.000 168 277 -1.00 0.000 286 223 0.001688 0.001340 K19 4 3 3438 1.00 0.000 yedW b1969 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b1970 179 124 1.00 0.000 257 271 -1.00 0.000 151 264 0.000893 0.001590 M19 4 3 3439 -1.00 0.000 b1970 b1970 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1971 472 1415 -2.83 -0.452 242 802 -1.60 -0.205 943 522 0.005566 0.003143 H19 2 2 2476 1.77 0.248 b1971 b1971 putative reductase Putative enzymes putative enzyme; Not classified b1972 348 312 1.00 0.000 187 290 -1.00 0.000 330 239 0.001949 0.001437 O19 4 3 3440 1.00 0.000 b1972 b1972 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1973 372 328 1.00 0.000 516 664 -1.29 -0.110 350 590 0.002064 0.003551 A21 4 3 3441 -1.18 -0.073 b1973 b1973 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1974 531 486 1.06 0.026 412 470 -1.00 0.000 509 441 0.003001 0.002654 C21 4 3 3442 1.00 0.000 yodB b1974 putative cytochrome Putative enzymes putative enzyme; Not classified b1976 641 820 -1.28 -0.107 593 540 1.10 0.041 731 566 0.004312 0.003409 E21 4 3 3443 1.26 0.102 b1976 b1976 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1978 222 165 1.00 0.000 141 229 -1.00 0.000 194 185 0.001144 0.001116 G21 4 3 3444 1.00 0.000 b1978 b1978 putative factor Putative factors putative factor; Not classified b1979 17 111 -1.00 0.000 160 85 1.00 0.000 64 122 0.000377 0.000735 I21 4 3 3445 -1.00 0.000 b1979 b1979 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1980 206 172 1.00 0.000 42 21 1.00 0.000 189 32 0.001116 0.000192 K21 4 3 3446 1.00 0.000 b1980 b1980 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1981 5762 5592 1.03 0.013 2579 2701 -1.05 -0.020 5677 2640 0.033498 0.015893 P8 1 1 1184 2.11 0.324 shiA b1981 "putative transport protein, shikimate" Putative transport proteins putative transport; Not classified b1982 2821 2679 1.05 0.023 1084 1087 -1.00 -0.001 2750 1086 0.016228 0.006537 J6 2 3 2009 2.48 0.395 amn b1982 AMP nucleosidase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b1983 1216 1272 -1.05 -0.020 2669 3185 -1.19 -0.077 1244 2927 0.007339 0.017620 M21 4 3 3447 -2.40 -0.380 b1983 b1983 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1985 1883 1538 1.22 0.088 2111 2135 -1.01 -0.005 1711 2123 0.010093 0.012782 O21 4 3 3448 -1.27 -0.103 yeeO b1985 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1987 330 338 -1.00 0.000 133 128 1.00 0.000 334 131 0.001972 0.000787 G9 3 1 228 1.00 0.000 cbl b1987 transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM Regulatory function regulator; Amino acid biosynthesis: Cysteine b1988 1313 914 1.44 0.157 547 791 -1.44 -0.160 1114 669 0.006571 0.004029 I9 3 1 229 1.63 0.212 nac b1988 nitrogen assimilation control protein Regulatory function regulator; Central intermediary metabolism b1990 678 541 1.25 0.098 465 919 -1.84 -0.264 609 692 0.003596 0.004165 A23 4 3 3449 -1.16 -0.064 erfK b1990 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1991 294 311 -1.00 0.000 211 208 1.00 0.000 302 210 0.001784 0.001263 P5 1 2 2328 1.00 0.000 cobT b1991 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Cobalamin" b1992 420 251 1.00 0.000 518 389 1.04 0.015 336 454 0.001982 0.002731 B7 1 2 2329 -1.00 0.000 cobS b1992 cobalamin 5'-phosphate synthase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Cobalamin" b1993 199 195 1.00 0.000 130 161 -1.00 0.000 197 145 0.001163 0.000875 D7 1 2 2330 1.00 0.000 cobU b1993 cobinamide kinase/cobinamide phosphate guanylyltransferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Cobalamin" b1994 4255 4547 -1.07 -0.029 6709 6619 1.01 0.006 4401 6664 0.025970 0.040121 C23 4 3 3450 -1.54 -0.189 trs5_6 b1994 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1995 525 708 -1.35 -0.130 489 664 -1.33 -0.123 616 576 0.003637 0.003471 E23 4 3 3451 1.05 0.020 b1995 b1995 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1996 967 1368 -1.42 -0.151 1022 1240 -1.21 -0.084 1168 1131 0.006890 0.006808 G23 4 3 3452 1.01 0.005 yi22_3 b1996 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1997 3851 3837 1.00 0.002 2069 2140 -1.03 -0.015 3844 2105 0.022684 0.012671 I23 4 3 3453 1.79 0.253 yi21_3 b1997 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b1998 337 454 -1.00 0.000 359 332 1.00 0.000 395 346 0.002334 0.002080 K23 4 3 3454 1.00 0.000 b1998 b1998 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b1999 89 24 1.00 0.000 105 23 1.00 0.000 56 64 0.000333 0.000385 I8 3 1 605 -1.00 0.000 yeeP b1999 putative histone Putative cell structure putative structure; Not classified b2000 6880 7561 -1.10 -0.041 14048 15344 -1.09 -0.038 7220 14696 0.042604 0.088476 M23 4 3 3455 -2.08 -0.317 flu b2000 "outer membrane fluffing protein, similar to adhesin" Cell structure membrane; Outer membrane constituents b2001 2454 2342 1.05 0.020 2959 3089 -1.04 -0.019 2398 3024 0.014149 0.018206 O23 4 3 3456 -1.29 -0.109 b2001 b2001 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2002 522 691 -1.32 -0.122 810 1063 -1.31 -0.118 606 937 0.003577 0.005639 K3 1 2 1550 -1.58 -0.198 yeeS b2002 "putative DNA repair protein, RADC family" Putative enzymes putative enzyme; Not classified b2003 5759 4998 1.15 0.062 3874 4169 -1.08 -0.032 5379 4021 0.031738 0.024211 A2 1 3 3457 1.31 0.118 yeeT b2003 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2004 1399 811 1.73 0.237 991 848 1.17 0.068 1105 919 0.006518 0.005535 K8 3 1 606 1.18 0.071 yeeU b2004 putative structural protein Putative cell structure putative structure; Not classified b2005 26503 29376 -1.11 -0.045 14379 13742 1.05 0.020 27939 14061 0.164861 0.084652 C2 1 3 3458 1.95 0.289 yeeV b2005 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2006 1797 1768 1.02 0.007 1096 1211 -1.10 -0.043 1782 1153 0.010518 0.006942 E2 1 3 3459 1.52 0.180 yeeW b2006 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2007 6910 3357 2.06 0.314 5028 5300 -1.05 -0.023 5133 5164 0.030290 0.031092 M8 3 1 607 -1.03 -0.011 yeeX b2007 putative alpha helix protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2008 1705 1215 1.40 0.147 1063 1279 -1.20 -0.080 1460 1171 0.008616 0.007051 G2 1 3 3460 1.22 0.087 yeeA b2008 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2009 3838 3455 1.11 0.046 5509 4264 1.29 0.111 3647 4887 0.021519 0.029421 D13 4 2 2642 -1.37 -0.136 sbmC b2009 SbmC protein Putative factors orf; Unknown function b2010 288 247 1.00 0.000 -22 203 -1.00 0.000 268 91 0.001579 0.000545 M2 2 1 487 1.00 0.000 dacD b2010 penicillin binding protein 6b Cell processes "putative enzyme; Murein sacculus, peptidoglycan" b2011 639 721 -1.13 -0.053 1023 805 1.27 0.104 680 914 0.004011 0.005502 O23 1 2 1632 -1.37 -0.137 sbcB b2011 "exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2012 5714 5304 1.08 0.032 3203 3088 1.04 0.016 5509 3145 0.032508 0.018937 I2 1 3 3461 1.72 0.235 yeeD b2012 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2013 1902 2080 -1.09 -0.039 1145 1163 -1.02 -0.007 1991 1154 0.011749 0.006948 K2 1 3 3462 1.69 0.228 yeeE b2013 putative transport system permease protein Putative transport proteins putative transport; Not classified b2014 1800 1859 -1.03 -0.014 6348 7042 -1.11 -0.045 1830 6695 0.010796 0.040307 N3 3 1 975 -3.73 -0.572 yeeF b2014 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b2015 626 326 1.25 0.098 285 225 1.00 0.000 476 255 0.002810 0.001536 K9 3 1 230 1.00 0.000 yeeY b2015 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b2016 1802 1692 1.06 0.027 754 978 -1.30 -0.113 1747 866 0.010308 0.005212 J19 2 2 2477 1.98 0.296 b2016 b2016 putative enzyme of sugar metabolism Putative enzymes putative enzyme; Not classified b2017 10851 14318 -1.32 -0.120 13605 13961 -1.03 -0.011 12585 13783 0.074259 0.082981 M2 1 3 3463 -1.12 -0.048 yefM b2017 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2018 1603 1639 -1.02 -0.010 864 966 -1.12 -0.049 1621 915 0.009564 0.005509 E19 4 2 1899 1.74 0.240 hisL b2018 his operon leader peptide Amino acid biosynthesis leader; Amino acid biosynthesis: Histidine b2019 4364 6049 -1.39 -0.142 2759 3226 -1.17 -0.068 5206 2993 0.030720 0.018017 G19 4 2 1900 1.71 0.232 hisG b2019 ATP phosphoribosyltransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2020 4933 5038 -1.02 -0.009 2207 2705 -1.23 -0.088 4986 2456 0.029418 0.014787 I19 4 2 1901 1.99 0.299 hisD b2020 L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2021 3315 3564 -1.08 -0.031 1794 1913 -1.07 -0.028 3440 1854 0.020297 0.011160 K19 4 2 1902 1.82 0.260 hisC b2021 histidinol-phosphate aminotransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2022 2744 2876 -1.05 -0.020 1470 1473 -1.00 -0.001 2810 1471 0.016581 0.008859 M19 4 2 1903 1.87 0.272 hisB b2022 imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2023 1548 1864 -1.20 -0.081 649 812 -1.25 -0.097 1706 731 0.010066 0.004398 O19 4 2 1904 2.29 0.360 hisH b2023 glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2024 1484 1131 1.31 0.118 1436 1445 -1.01 -0.003 1308 1441 0.007717 0.008673 A21 4 2 1905 -1.12 -0.051 hisA b2024 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2025 15575 13945 1.12 0.048 9208 10228 -1.11 -0.046 14760 9718 0.087094 0.058507 C21 4 2 1906 1.49 0.173 hisF b2025 imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2026 2795 2319 1.21 0.081 1894 1742 1.09 0.036 2557 1818 0.015090 0.010944 E21 4 2 1907 1.38 0.139 hisI b2026 phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Histidine b2027 16840 17516 -1.04 -0.017 22567 21791 1.04 0.015 17178 22179 0.101363 0.133532 O2 1 3 3464 -1.32 -0.120 wzzB b2027 regulator of length of O-antigen component of lipopolysaccharide chains Regulatory function regulator; Outer membrane constituents b2028 1413 1624 -1.15 -0.061 1159 1241 -1.07 -0.030 1519 1200 0.008961 0.007226 A4 1 3 3465 1.24 0.093 ugd b2028 UDP-glucose 6-dehydrogenase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2029 6525 6724 -1.03 -0.013 9757 9325 1.05 0.020 6624 9541 0.039088 0.057440 H4 3 1 1356 -1.47 -0.167 gnd b2029 "gluconate-6-phosphate dehydrogenase, decarboxylating" Central intermediary metabolism "enzyme; Energy metabolism, carbon: Oxidative branch, pentose pathway" b2030 4699 3638 1.29 0.111 6430 6932 -1.08 -0.033 4169 6681 0.024598 0.040225 E19 4 1 363 -1.64 -0.214 trs5_7 b2030 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b2031 4430 4653 -1.05 -0.021 3941 4076 -1.03 -0.015 4542 4008 0.026801 0.024132 L19 2 2 2478 1.11 0.046 yefJ b2031 putative creatinase (EC 3.5.-) Putative enzymes putative enzyme; Not classified b2032 771 722 1.07 0.029 1555 1473 1.06 0.024 747 1514 0.004407 0.009117 C4 1 3 3466 -2.07 -0.316 wbbK b2032 putative glucose transferase Putative enzymes putative enzyme; Not classified b2033 866 1459 -1.68 -0.226 1232 1332 -1.08 -0.034 1163 1282 0.006861 0.007720 N19 2 2 2479 -1.13 -0.051 wbbJ b2033 putative O-acetyl transferase Putative enzymes putative enzyme; Not classified b2034 1257 1096 1.15 0.060 3054 3171 -1.04 -0.016 1176 3112 0.006941 0.018737 E4 1 3 3467 -2.70 -0.431 wbbI b2034 putative Galf transferase Putative enzymes putative enzyme; Not classified b2035 606 1171 -1.93 -0.286 690 1005 -1.46 -0.163 889 848 0.005243 0.005103 O2 2 1 488 1.03 0.012 wbbH b2035 O-antigen polymerase Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b2036 4339 3579 1.21 0.084 3279 3228 1.02 0.007 3959 3254 0.023362 0.019588 G4 1 3 3468 1.19 0.077 glf b2036 UDP-galactopyranose mutase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2037 -278 94 -1.00 0.000 -442 186 -1.00 0.000 -92 -128 -0.000543 -0.000772 A4 2 1 489 1.00 0.000 rfbX b2037 putative O-antigen transporter Putative transport proteins putative transport; Surface polysaccharides & antigens b2038 1892 1236 1.53 0.185 2120 1554 1.36 0.135 1564 1837 0.009228 0.011059 A14 3 2 2161 -1.20 -0.079 rfbC b2038 "dTDP-6-deoxy-D-glucose-3,5 epimerase" Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2039 2276 1525 1.49 0.174 2711 2483 1.09 0.038 1900 2597 0.011212 0.015633 C14 3 2 2162 -1.39 -0.144 rfbA b2039 glucose-1-phosphate thymidylyltransferase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2040 2223 1659 1.34 0.127 3980 3212 1.24 0.093 1941 3596 0.011456 0.021652 E14 3 2 2163 -1.89 -0.276 rfbD b2040 dTDP-6-deoxy-L-mannose-dehydrogenase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2041 17043 16177 1.05 0.023 9007 8075 1.12 0.047 16610 8541 0.098010 0.051423 G14 3 2 2164 1.91 0.280 rfbB b2041 "dTDP-glucose 4,6 dehydratase" Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2042 2039 1341 1.52 0.182 2232 2003 1.11 0.047 1690 2118 0.009971 0.012749 I14 3 2 2165 -1.28 -0.107 galF b2042 "homolog of Salmonella UTP--glucose-1-P uridyltransferase, probably a UDP-gal transferase" Putative enzymes "putative enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2043 2897 2876 1.01 0.003 2256 1879 1.20 0.080 2887 2068 0.017034 0.012448 I4 1 3 3469 1.37 0.136 wcaM b2043 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2044 3544 3624 -1.02 -0.010 1868 1809 1.03 0.014 3584 1838 0.021147 0.011069 P19 2 2 2480 1.91 0.281 wcaL b2044 putative colanic acid biosynthesis glycosyl transferase Putative enzymes putative enzyme; Not classified b2045 8620 9073 -1.05 -0.022 5591 5226 1.07 0.029 8847 5408 0.052201 0.032562 M9 1 1 39 1.60 0.205 wcaK b2045 putative galactokinase (EC 2.7.1.6). Putative enzymes putative enzyme; Not classified b2046 3173 3211 -1.01 -0.005 2274 2077 1.10 0.039 3192 2175 0.018836 0.013098 K4 1 3 3470 1.44 0.158 wzxC b2046 probable export protein Putative transport proteins "putative transport; Protein, peptide secretion" b2047 6165 8324 -1.35 -0.130 3313 3515 -1.06 -0.026 7245 3414 0.042749 0.020554 B21 2 2 2481 2.08 0.318 wcaJ b2047 putative colanic acid biosynthsis UDP-glucose lipid carrier transferase Putative enzymes putative enzyme; Not classified b2048 1734 1881 -1.08 -0.035 1977 1910 1.03 0.015 1807 1943 0.010665 0.011700 K14 3 2 2166 -1.10 -0.040 cpsG b2048 phosphomannomutase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2049 1282 906 1.41 0.151 2335 2083 1.12 0.050 1094 2209 0.006454 0.013300 M14 3 2 2167 -2.06 -0.314 cpsB b2049 mannose-1-phosphate guanyltransferase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2050 1660 1503 1.10 0.043 1016 1339 -1.32 -0.120 1582 1178 0.009332 0.007090 M4 1 3 3471 1.32 0.119 wcaI b2050 putative colanic biosynthesis glycosyl transferase Putative enzymes putative enzyme; Not classified b2051 7242 8119 -1.12 -0.050 13937 12679 1.10 0.041 7680 13308 0.045319 0.080123 O4 1 3 3472 -1.77 -0.247 wcaH b2051 GDP-mannose mannosyl hydrolase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2052 1148 1202 -1.05 -0.020 890 1050 -1.18 -0.072 1175 970 0.006934 0.005841 A6 1 3 3473 1.19 0.074 wcaG b2052 putative nucleotide di-P-sugar epimerase or dehydratase Putative enzymes putative enzyme; Not classified b2053 3059 3503 -1.15 -0.059 4861 4628 1.05 0.021 3281 4744 0.019359 0.028564 D21 2 2 2482 -1.48 -0.169 gmd b2053 GDP-D-mannose dehydratase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b2054 1592 2236 -1.40 -0.148 435 911 -1.82 -0.261 1914 673 0.011296 0.004053 F21 2 2 2483 2.79 0.445 wcaF b2054 putative transferase Putative enzymes putative enzyme; Not classified b2055 2679 3218 -1.20 -0.080 1434 1503 -1.05 -0.020 2949 1468 0.017399 0.008840 H21 2 2 2484 1.97 0.294 wcaE b2055 putative colanic acid biosynthesis glycosyl transferase Putative enzymes putative enzyme; Not classified b2056 1305 1116 1.17 0.068 739 553 1.34 0.126 1210 646 0.007140 0.003889 M9 3 1 231 1.84 0.264 wcaD b2056 putative colanic acid polymerase Putative enzymes putative enzyme; Phage-related functions and prophages b2057 468 345 1.00 0.000 470 326 1.00 0.000 406 398 0.002398 0.002396 C6 1 3 3474 1.00 0.000 wcaC b2057 putative glycosyl transferase Putative enzymes putative enzyme; Not classified b2058 6769 7219 -1.07 -0.028 4016 4852 -1.21 -0.082 6994 4434 0.041268 0.026696 G21 4 2 1908 1.55 0.189 wcaB b2058 putative transferase Putative enzymes putative enzyme; Not classified b2059 19749 20909 -1.06 -0.025 5386 6335 -1.18 -0.070 20329 5860 0.119956 0.035281 C4 2 1 490 3.40 0.531 wcaA b2059 putative regulator Putative regulatory proteins putative regulator; Not classified b2060 806 617 1.31 0.116 377 412 -1.00 0.000 711 395 0.004197 0.002376 E6 1 3 3475 1.40 0.146 b2060 b2060 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2061 1120 947 1.18 0.073 598 448 1.20 0.078 1034 523 0.006100 0.003149 O9 3 1 232 1.94 0.287 wzb b2061 probable protein-tyrosine-phosphatase Putative regulatory proteins putative enzyme; Not classified b2062 2380 4772 -2.01 -0.302 2662 4552 -1.71 -0.233 3576 3607 0.021101 0.021717 E4 2 1 491 -1.03 -0.012 wza b2062 putative polysaccharide export protein Putative transport proteins putative transport; Not classified b2063 6175 5983 1.03 0.014 3403 3632 -1.07 -0.028 6079 3518 0.035871 0.021178 G6 1 3 3476 1.69 0.229 yegH b2063 putative transport protein Putative transport proteins putative transport; Not classified b2064 1115 1637 -1.47 -0.167 852 990 -1.16 -0.065 1376 921 0.008120 0.005543 J21 2 2 2485 1.46 0.166 asmA b2064 suppressor of ompF assembly mutants Cell processes phenotype; Outer membrane constituents b2065 3763 3547 1.06 0.026 5315 5468 -1.03 -0.012 3655 5391 0.021568 0.032459 C24 1 2 2010 -1.50 -0.178 dcd b2065 2'-deoxycytidine 5'-triphosphate deaminase Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b2066 650 742 -1.14 -0.057 828 781 1.06 0.026 696 804 0.004108 0.004843 O14 3 2 2168 -1.18 -0.071 udk b2066 uridine/cytidine kinase Nucleotide biosynthesis and metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b2067 542 385 1.08 0.035 1085 837 1.30 0.113 464 961 0.002735 0.005784 A11 3 1 233 -1.93 -0.285 yegE b2067 putative sensor-type protein Putative regulatory proteins putative regulator; Not classified b2068 3503 3870 -1.10 -0.043 3503 4214 -1.20 -0.080 3687 3858 0.021755 0.023229 M3 1 2 1551 -1.07 -0.028 alkA b2068 "3-methyl-adenine DNA glycosylase II, inducible" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2069 1814 2399 -1.32 -0.121 1456 2114 -1.45 -0.162 2106 1785 0.012429 0.010748 F2 2 1 1251 1.16 0.063 yegD b2069 putative heat shock protein Putative regulatory proteins putative regulator; Not classified b2070 3249 3616 -1.11 -0.047 1903 2138 -1.12 -0.051 3432 2020 0.020254 0.012162 L21 2 2 2486 1.67 0.221 b2070 b2070 putative chaperonin Putative factors putative factor; Not classified b2071 2711 2505 1.08 0.034 1490 1320 1.13 0.052 2608 1405 0.015388 0.008460 I6 1 3 3477 1.82 0.260 b2071 b2071 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2072 2792 2097 1.33 0.124 1537 1815 -1.18 -0.072 2445 1676 0.014424 0.010090 K6 1 3 3478 1.43 0.155 b2072 b2072 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2073 2112 1385 1.52 0.183 1203 1463 -1.22 -0.085 1749 1333 0.010320 0.008027 M6 1 3 3479 1.29 0.109 b2073 b2073 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2074 2425 2547 -1.05 -0.021 2350 2170 1.08 0.035 2486 2260 0.014669 0.013609 P3 3 1 976 1.08 0.033 b2074 b2074 putative membrane protein putative membrane protein putative membrane; Not classified b2075 6992 6464 1.08 0.034 5179 5871 -1.13 -0.054 6728 5525 0.039700 0.033262 O6 1 3 3480 1.19 0.077 yegN b2075 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2076 1977 1990 -1.01 -0.003 1497 1451 1.03 0.013 1984 1474 0.011704 0.008874 A8 1 3 3481 1.32 0.120 yegO b2076 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2077 13396 8836 1.52 0.181 8636 9259 -1.07 -0.030 11116 8947 0.065593 0.053868 B5 3 1 977 1.22 0.086 yegB b2077 putative transport protein Putative transport proteins putative transport; Not classified b2078 556 624 -1.12 -0.050 533 478 1.07 0.028 590 506 0.003481 0.003044 D6 2 3 1633 1.14 0.058 baeS b2078 sensor protein (for BaeR) "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b2079 448 763 -1.53 -0.184 976 625 1.56 0.193 606 801 0.003574 0.004820 C1 2 2 1634 -1.35 -0.130 baeR b2079 transcriptional response regulatory protein (sensor BaeS) Regulatory function "regulator; RNA synthesis, modification, DNA transcription" b2080 3925 3423 1.15 0.059 451 398 1.00 0.000 3674 424 0.021680 0.002554 C8 1 3 3482 7.23 0.859 b2080 b2080 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2081 855 908 -1.06 -0.026 1202 1291 -1.07 -0.031 881 1247 0.005201 0.007505 E8 1 3 3483 -1.44 -0.159 yegQ b2081 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2082 3320 2725 1.22 0.086 1216 1413 -1.16 -0.065 3022 1314 0.017834 0.007913 G19 4 1 364 2.25 0.353 ogrK b2082 prophage P2 ogr protein "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b2083 362 391 -1.00 0.000 98 247 -1.00 0.000 376 172 0.002221 0.001038 G8 1 3 3484 1.00 0.000 b2083 b2083 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2084 493 608 -1.22 -0.085 457 419 1.00 0.000 550 438 0.003246 0.002638 I8 1 3 3485 1.08 0.034 b2084 b2084 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2085 160 218 -1.00 0.000 46 75 -1.00 0.000 189 61 0.001115 0.000366 K8 1 3 3486 1.00 0.000 b2085 b2085 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2086 1352 1432 -1.06 -0.025 651 617 1.05 0.023 1392 634 0.008212 0.003818 M8 1 3 3487 2.15 0.333 b2086 b2086 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2087 427 522 -1.04 -0.019 542 549 -1.01 -0.005 474 546 0.002799 0.003284 O9 1 1 40 -1.09 -0.039 gatR_1 b2087 "split galactitol utilization operon repressor, interrupted" Regulatory function regulator; Degradation of small molecules: Carbon compounds b2088 4478 3178 1.41 0.149 2082 2661 -1.28 -0.107 3828 2371 0.022585 0.014277 P16 1 3 4288 1.58 0.199 b2088 b2088 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2089 2817 2128 1.32 0.122 1025 1328 -1.30 -0.112 2472 1176 0.014588 0.007082 I19 4 1 365 2.06 0.314 tra5_4 b2089 IS3 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b2090 3646 3392 1.07 0.031 3007 3008 -1.00 0.000 3519 3007 0.020766 0.018105 A11 1 1 41 1.15 0.060 gatR_2 b2090 "split galactitol utilization operon repressor, fragment 2" Regulatory function regulator; Degradation of small molecules: Carbon compounds b2091 6302 5852 1.08 0.032 4865 4688 1.04 0.016 6077 4776 0.035857 0.028756 C11 1 1 42 1.25 0.096 gatD b2091 galactitol-1-phosphate dehydrogenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2092 1662 1764 -1.06 -0.026 848 1008 -1.19 -0.075 1713 928 0.010107 0.005586 M20 4 1 751 1.81 0.257 gatC b2092 PTS system galactitol-specific enzyme IIC Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2093 1207 1520 -1.26 -0.100 379 449 -1.00 0.000 1363 414 0.008044 0.002494 O20 4 1 752 2.68 0.428 gatB b2093 galactitol-specific enzyme IIB of phosphotransferase system Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2094 1966 2269 -1.15 -0.062 1161 1405 -1.21 -0.083 2118 1283 0.012495 0.007723 A22 4 1 753 1.62 0.209 gatA b2094 galactitol-specific enzyme IIA of phosphotransferase system Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2095 30573 28986 1.05 0.023 19292 18901 1.02 0.009 29779 19096 0.175719 0.114971 E11 1 1 43 1.53 0.184 gatZ b2095 putative tagatose 6-phosphate kinase 1 Putative enzymes putative enzyme; Not classified b2096 20528 18313 1.12 0.050 11140 9994 1.11 0.047 19421 10567 0.114595 0.063618 G11 1 1 44 1.80 0.256 gatY b2096 tagatose-bisphosphate aldolase 1 Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2097 5326 5519 -1.04 -0.016 2617 2865 -1.10 -0.039 5423 2741 0.031997 0.016502 O8 1 3 3488 1.94 0.288 b2097 b2097 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2098 4494 4126 1.09 0.037 3467 3045 1.14 0.056 4310 3256 0.025433 0.019604 D5 3 1 978 1.30 0.113 yegT b2098 putative nucleoside permease protein Putative transport proteins putative transport; Not classified b2099 1192 1372 -1.15 -0.061 1092 1164 -1.07 -0.028 1282 1128 0.007563 0.006793 A10 1 3 3489 1.11 0.047 b2099 b2099 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2100 1615 1848 -1.14 -0.059 1907 1791 1.06 0.027 1731 1849 0.010214 0.011130 N21 2 2 2487 -1.09 -0.037 b2100 b2100 putative kinase Putative enzymes putative enzyme; Not classified b2101 33338 35867 -1.08 -0.032 27069 27013 1.00 0.001 34602 27041 0.204179 0.162801 C10 1 3 3490 1.25 0.098 yegW b2101 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2102 631 449 1.26 0.101 505 635 -1.26 -0.100 540 570 0.003186 0.003434 E10 1 3 3491 -1.08 -0.033 yegX b2102 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2103 885 739 1.20 0.078 662 569 1.16 0.066 812 615 0.004792 0.003706 G10 1 3 3492 1.29 0.112 thiD b2103 phosphomethylpyrimidine kinase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b2104 17136 18739 -1.09 -0.039 10939 10656 1.03 0.011 17937 10798 0.105843 0.065008 P21 2 2 2488 1.63 0.212 thiM b2104 hydoxyethylthiazole kinase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b2105 443 892 -1.78 -0.251 343 663 -1.33 -0.122 667 503 0.003938 0.003027 I10 1 3 3493 1.30 0.114 yohL b2105 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2106 281 307 -1.00 0.000 292 201 1.00 0.000 294 246 0.001734 0.001482 K10 1 3 3494 1.00 0.000 yohM b2106 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2107 4726 4785 -1.01 -0.005 9178 8616 1.07 0.027 4755 8897 0.028059 0.053566 M10 1 3 3495 -1.91 -0.281 b2107 b2107 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2108 192 601 -1.20 -0.080 145 282 -1.00 0.000 397 214 0.002340 0.001286 G4 2 1 492 1.00 0.000 yehA b2108 putative type-1 fimbrial protein Putative cell structure putative structure; Not classified b2109 78532 72131 1.09 0.037 155415 160521 -1.03 -0.014 75331 157968 0.444508 0.951055 O10 1 3 3496 -2.14 -0.330 yehB b2109 putative outer membrane protein putative membrane protein putative membrane; Not classified b2110 124 385 -1.00 0.000 145 76 1.00 0.000 255 111 0.001503 0.000667 H2 2 1 1252 1.00 0.000 yehC b2110 putative chaperone Putative factors putative factor; Not classified b2111 -163 371 -1.00 0.000 -244 34 -1.00 0.000 104 -105 0.000612 -0.000632 I4 2 1 493 1.00 0.000 yehD b2111 putative fimbrial-like protein Putative cell structure putative structure; Not classified b2112 413 448 -1.00 0.000 295 386 -1.00 0.000 431 340 0.002541 0.002049 A12 1 3 3497 1.00 0.000 yehE b2112 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2113 1370 815 1.68 0.225 2388 2350 1.02 0.007 1092 2369 0.006446 0.014263 A16 3 2 2169 -2.21 -0.345 mrp b2113 putative ATPase Putative enzymes putative enzyme; Not classified b2114 16573 16708 -1.01 -0.004 22218 22482 -1.01 -0.005 16640 22350 0.098191 0.134560 F6 2 3 1729 -1.37 -0.137 metG b2114 methionine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b2115 1650 1783 -1.08 -0.034 553 461 1.11 0.044 1717 507 0.010130 0.003054 C22 4 1 754 3.32 0.521 molR_1 b2115 "molybdate metabolism regulator, first fragment" Regulatory function "regulator; Biosynthesis of cofactors, carriers: Molybdopterin" b2116 2940 2851 1.03 0.013 2110 1867 1.13 0.053 2895 1989 0.017083 0.011973 E22 4 1 755 1.43 0.154 molR_2 b2116 "molybdate metabolism regulator, second fragment 2" Regulatory function "regulator; Biosynthesis of cofactors, carriers: Molybdopterin" b2117 1153 1230 -1.07 -0.028 830 1159 -1.40 -0.145 1192 994 0.007031 0.005987 G22 4 1 756 1.17 0.070 molR_3 b2117 "molybdate metabolism regulator, third fragment" Regulatory function "regulator; Biosynthesis of cofactors, carriers: Molybdopterin" b2118 57551 39700 1.45 0.161 55612 56809 -1.02 -0.009 48625 56211 0.286924 0.338420 C12 1 3 3498 -1.18 -0.072 yehI b2118 putative regulator Putative regulatory proteins putative regulator; Not classified b2119 4012 3764 1.07 0.028 4858 4767 1.02 0.008 3888 4813 0.022944 0.028975 E12 1 3 3499 -1.26 -0.101 yehL b2119 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2120 1933 1270 1.52 0.182 1121 1108 1.01 0.005 1602 1114 0.009451 0.006710 G12 1 3 3500 1.41 0.149 yehM b2120 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2121 837 620 1.35 0.131 844 815 1.04 0.015 729 829 0.004299 0.004994 I12 1 3 3501 -1.16 -0.065 yehP b2121 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2122 669 527 1.27 0.103 429 463 -1.00 0.000 598 446 0.003527 0.002685 K12 1 3 3502 1.18 0.070 yehQ b2122 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2123 259 185 1.00 0.000 156 247 -1.00 0.000 222 201 0.001311 0.001212 M12 1 3 3503 1.00 0.000 yehR b2123 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2124 1216 1027 1.18 0.073 1640 1847 -1.13 -0.051 1122 1743 0.006620 0.010496 O12 1 3 3504 -1.59 -0.200 yehS b2124 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2125 552 597 -1.08 -0.034 619 628 -1.02 -0.007 575 624 0.003390 0.003754 A14 1 3 3505 -1.11 -0.044 yehT b2125 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2126 25698 24898 1.03 0.014 26943 27088 -1.01 -0.002 25298 27015 0.149277 0.162646 C14 1 3 3506 -1.09 -0.037 yehU b2126 putative 2-component sensor protein Putative regulatory proteins putative regulator; Not classified b2127 911 1043 -1.14 -0.059 841 875 -1.04 -0.017 977 858 0.005763 0.005166 E14 1 3 3507 1.12 0.047 yehV b2127 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2128 1208 730 1.65 0.218 662 443 1.32 0.122 969 553 0.005718 0.003328 F5 3 1 979 1.72 0.235 yehW b2128 putative transport system permease protein Putative transport proteins putative transport; Not classified b2129 2695 3519 -1.31 -0.116 1971 1810 1.09 0.037 3107 1891 0.018331 0.011383 H5 3 1 980 1.61 0.207 yehX b2129 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b2130 2371 2036 1.16 0.066 2137 2002 1.07 0.028 2204 2069 0.013003 0.012458 G14 1 3 3508 1.04 0.019 yehY b2130 putative transport system permease protein Putative transport proteins putative transport; Not classified b2131 12308 11209 1.10 0.041 6533 5763 1.13 0.054 11759 6148 0.069385 0.037013 J5 3 1 981 1.87 0.273 yehZ b2131 putative transport system permease protein Putative transport proteins putative transport; Not classified b2132 3704 3289 1.13 0.052 1560 1575 -1.01 -0.004 3496 1567 0.020631 0.009436 I11 1 1 45 2.19 0.340 bglX b2132 "beta-D-glucoside glucohydrolase, periplasmic" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2133 4019 3530 1.14 0.056 651 741 -1.14 -0.056 3774 696 0.022272 0.004190 J4 3 1 1357 5.32 0.726 dld b2133 "D-lactate dehydrogenase, FAD protein, NADH independent" Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2134 3052 3249 -1.06 -0.027 972 1455 -1.50 -0.175 3151 1213 0.018591 0.007306 K4 2 1 494 2.54 0.406 pbpG b2134 penicillin-binding protein 7 Cell processes "putative enzyme; Murein sacculus, peptidoglycan" b2135 536 526 1.02 0.008 141 344 -1.00 0.000 531 243 0.003133 0.001462 I14 1 3 3509 1.04 0.019 yohC b2135 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2136 1687 2006 -1.19 -0.075 3233 3198 1.01 0.005 1847 3216 0.010896 0.019359 K14 1 3 3510 -1.78 -0.250 yohD b2136 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2137 779 1364 -1.75 -0.243 1073 1394 -1.30 -0.114 1071 1233 0.006322 0.007426 B23 2 2 2489 -1.17 -0.070 yohF b2137 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2138 23992 17795 1.35 0.130 24530 23927 1.03 0.011 20894 24229 0.123287 0.145869 L5 3 1 982 -1.18 -0.073 yohG b2138 putative channel/filament proteins "Hypothetical, unclassified, unknown" orf; Not classified b2139 145 157 -1.00 0.000 283 179 1.00 0.000 151 231 0.000890 0.001392 M14 1 3 3511 -1.00 0.000 yohH b2139 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2140 546 419 1.09 0.038 1051 1005 1.05 0.019 483 1028 0.002848 0.006189 C11 3 1 234 -2.06 -0.314 yohI b2140 putative regulator protein Putative regulatory proteins putative regulator; Not classified b2141 1312 991 1.32 0.122 1781 1562 1.14 0.057 1152 1671 0.006795 0.010063 O14 1 3 3512 -1.48 -0.171 yohJ b2141 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2142 1396 1132 1.23 0.091 1018 1147 -1.13 -0.052 1264 1082 0.007457 0.006517 N5 3 1 983 1.14 0.059 yohK b2142 putative seritonin transporter Putative transport proteins putative transport; Not classified b2143 1133 1323 -1.17 -0.067 1823 1930 -1.06 -0.025 1228 1876 0.007246 0.011296 E24 1 2 2011 -1.56 -0.193 cdd b2143 cytidine/deoxycytidine deaminase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b2144 1439 1477 -1.03 -0.011 869 594 1.46 0.165 1458 732 0.008605 0.004406 B10 1 1 1185 1.95 0.291 sanA b2144 vancomycin sensitivity Cell processes transport; Drug/analog sensitivity b2145 922 1026 -1.11 -0.046 769 656 1.17 0.069 974 712 0.005748 0.004289 A16 1 3 3513 1.34 0.127 b2145 b2145 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2146 3630 4345 -1.20 -0.078 2344 2679 -1.14 -0.058 3988 2511 0.023530 0.015121 D23 2 2 2490 1.56 0.192 b2146 b2146 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2147 10998 9235 1.19 0.076 5464 6328 -1.16 -0.064 10116 5896 0.059694 0.035498 F23 2 2 2491 1.68 0.226 yeiA b2147 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2148 918 1189 -1.30 -0.112 1150 1270 -1.10 -0.043 1053 1210 0.006215 0.007286 I22 4 1 757 -1.17 -0.069 mglC b2148 methyl-galactoside transport and galactose taxis Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2149 211 213 -1.00 0.000 196 336 -1.00 0.000 212 266 0.001253 0.001602 K22 4 1 758 -1.00 0.000 mglA b2149 ATP-binding component of methyl-galactoside transport and galactose taxis Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2150 726 944 -1.30 -0.114 1280 1205 1.06 0.026 835 1242 0.004927 0.007480 M22 4 1 759 -1.52 -0.181 mglB b2150 galactose-binding transport protein; receptor for galactose taxis Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2151 710 673 1.05 0.023 424 499 -1.00 0.000 691 462 0.004079 0.002780 K11 1 1 46 1.36 0.133 galS b2151 "mgl repressor, galactose operon inducer" Regulatory function regulator; Degradation of small molecules: Carbon compounds b2152 727 634 1.15 0.059 351 438 -1.00 0.000 680 395 0.004014 0.002377 C16 1 3 3514 1.34 0.126 yeiB b2152 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2153 4092 3461 1.18 0.073 1213 1189 1.02 0.009 3776 1201 0.022284 0.007231 F7 1 2 2331 3.08 0.489 folE b2153 GTP cyclohydrolase I "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b2154 1466 1254 1.17 0.068 1720 913 1.88 0.275 1360 1317 0.008024 0.007927 C16 3 2 2170 1.01 0.005 yeiG b2154 putative esterase (EC 3.1.1.-). "Hypothetical, unclassified, unknown" orf; Not classified b2155 7482 9449 -1.26 -0.101 957 951 1.01 0.002 8465 954 0.049952 0.005743 O22 4 1 760 8.70 0.939 cirA b2155 outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product Transport and binding proteins membrane; Outer membrane constituents b2156 2135 2036 1.05 0.021 2305 2221 1.04 0.016 2085 2263 0.012305 0.013625 P2 2 3 761 -1.11 -0.044 lysP b2156 lysine-specific permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2157 1428 685 2.09 0.319 1243 893 1.39 0.144 1056 1068 0.006232 0.006429 E11 3 1 235 -1.03 -0.013 yeiE b2157 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b2158 1447 1237 1.17 0.068 1682 1549 1.09 0.036 1342 1616 0.007918 0.009727 E16 1 3 3515 -1.23 -0.089 yeiH b2158 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2159 1811 3185 -1.76 -0.245 1744 2350 -1.35 -0.129 2498 2047 0.014741 0.012324 E1 2 2 1635 1.20 0.078 nfo b2159 endonuclease IV "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2160 1179 992 1.19 0.075 662 639 1.04 0.015 1085 651 0.006404 0.003917 M11 1 1 47 1.63 0.213 yeiI b2160 putative kinase Putative enzymes putative enzyme; Not classified b2161 672 664 1.01 0.005 609 348 1.22 0.086 668 479 0.003940 0.002881 P5 3 1 984 1.31 0.118 yeiJ b2161 putative transport system permease protein Putative transport proteins putative transport; Not classified b2162 4217 4262 -1.01 -0.005 6242 7003 -1.12 -0.050 4239 6623 0.025015 0.039871 G16 1 3 3516 -1.59 -0.202 yeiK b2162 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2163 561 419 1.12 0.050 173 243 -1.00 0.000 490 208 0.002892 0.001253 G11 3 1 236 1.00 0.000 yeiL b2163 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2164 930 892 1.04 0.018 1222 970 1.26 0.100 911 1096 0.005375 0.006600 B7 3 1 985 -1.23 -0.089 yeiM b2164 putative transport system permease protein Putative transport proteins putative transport; Not classified b2165 1011 1252 -1.24 -0.093 2053 1783 1.15 0.061 1131 1918 0.006674 0.011547 I16 1 3 3517 -1.73 -0.238 yeiN b2165 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2166 5922 7188 -1.21 -0.084 3614 3808 -1.05 -0.023 6555 3711 0.038678 0.022344 H23 2 2 2492 1.73 0.238 yeiC b2166 putative kinase Putative enzymes putative enzyme; Not classified b2167 2833 3605 -1.27 -0.105 1997 2048 -1.03 -0.011 3219 2022 0.018994 0.012174 O11 1 1 48 1.56 0.193 fruA b2167 "PTS system, fructose-specific transport protein" Regulatory function regulator; Degradation of small molecules: Carbon compounds b2168 1181 954 1.24 0.093 419 588 -1.18 -0.071 1067 503 0.006299 0.003030 L4 3 1 1358 2.08 0.318 fruK b2168 fructose-1-phosphate kinase Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b2169 1082 1250 -1.16 -0.063 1397 1423 -1.02 -0.008 1166 1410 0.006880 0.008490 C24 4 1 762 -1.23 -0.091 fruB b2169 "PTS system, fructose-specific IIA/fpr component" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2170 1820 997 1.83 0.262 1760 1507 1.17 0.067 1408 1633 0.008310 0.009834 D7 3 1 986 -1.18 -0.073 yeiO b2170 putative transport "Hypothetical, unclassified, unknown" orf; Not classified b2171 754 692 1.09 0.037 704 1146 -1.63 -0.212 723 925 0.004268 0.005569 K16 1 3 3518 -1.30 -0.116 yeiP b2171 putative elongation factor Putative factors putative factor; Not classified b2172 3552 3613 -1.02 -0.007 2504 2847 -1.14 -0.056 3582 2676 0.021139 0.016108 A13 1 1 49 1.31 0.118 yeiQ b2172 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2173 623 722 -1.16 -0.064 420 300 1.00 0.000 672 360 0.003967 0.002169 M16 1 3 3519 1.32 0.121 yeiR b2173 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2174 569 706 -1.24 -0.094 669 803 -1.20 -0.079 638 736 0.003762 0.004431 O16 1 3 3520 -1.18 -0.071 b2174 b2174 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2175 5828 6001 -1.03 -0.013 6825 7728 -1.13 -0.054 5914 7276 0.034899 0.043807 O8 3 1 608 -1.26 -0.099 spr b2175 putative lipoprotein putative membrane protein putative membrane; Not classified b2176 6835 5138 1.33 0.124 7217 7207 1.00 0.001 5986 7212 0.035323 0.043422 A18 1 3 3521 -1.23 -0.090 rtn b2176 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2177 7744 7488 1.03 0.015 8522 8566 -1.01 -0.002 7616 8544 0.044938 0.051440 C18 1 3 3522 -1.14 -0.059 yejA b2177 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2178 3869 3442 1.12 0.051 2916 2677 1.09 0.037 3656 2796 0.021571 0.016836 E18 1 3 3523 1.28 0.108 yejB b2178 putative transport system permease protein Putative transport proteins putative transport; Not classified b2179 1921 1589 1.21 0.082 1541 1375 1.12 0.049 1755 1458 0.010356 0.008777 E24 4 1 763 1.18 0.072 yejE b2179 putative transport system permease protein Putative transport proteins putative transport; Not classified b2180 1913 2377 -1.24 -0.094 2040 2121 -1.04 -0.017 2145 2081 0.012659 0.012526 G24 4 1 764 1.01 0.005 yejF b2180 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b2181 591 333 1.18 0.072 334 266 1.00 0.000 462 300 0.002724 0.001804 G18 1 3 3524 1.00 0.000 yejG b2181 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2182 9014 8303 1.09 0.036 5765 6086 -1.06 -0.024 8658 5926 0.051089 0.035676 D10 1 1 1186 1.43 0.156 bcr b2182 bicyclomycin resistance protein; transmembrane protein Cell processes transport; Drug/analog sensitivity b2183 964 1094 -1.13 -0.055 1203 1490 -1.24 -0.093 1029 1346 0.006074 0.008105 I18 1 3 3525 -1.33 -0.125 rsuA b2183 16S pseudouridylate 516 synthase "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b2184 3050 2630 1.16 0.064 2159 2235 -1.04 -0.015 2840 2197 0.016758 0.013227 O3 1 2 1552 1.27 0.103 yejH b2184 putative ATP-dependent helicase Putative enzymes putative enzyme; Not classified b2185 11944 6702 1.78 0.251 25424 20973 1.21 0.084 9323 23198 0.055014 0.139667 C1 3 2 1730 -2.54 -0.405 rplY b2185 50S ribosomal subunit protein L25 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b2186 4726 3076 1.54 0.187 4630 3889 1.19 0.076 3901 4260 0.023020 0.025646 K18 1 3 3526 -1.11 -0.047 yejK b2186 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2187 1290 1091 1.18 0.073 1211 1066 1.14 0.056 1191 1139 0.007025 0.006856 M18 1 3 3527 1.02 0.011 yejL b2187 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2188 1367 968 1.41 0.150 1163 859 1.35 0.131 1167 1011 0.006888 0.006087 E16 3 2 2171 1.13 0.054 yejM b2188 putative sulfatase Putative enzymes putative enzyme; Not classified b2190 11767 9534 1.23 0.091 23192 19446 1.19 0.077 10651 21319 0.062846 0.128352 E1 3 2 1731 -2.04 -0.310 yejO b2190 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b2191 800 719 1.11 0.046 879 813 1.08 0.034 759 846 0.004481 0.005094 O18 1 3 3528 -1.14 -0.056 b2191 b2191 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2192 3813 5021 -1.32 -0.120 6351 7747 -1.22 -0.086 4417 7049 0.026063 0.042441 K19 4 1 366 -1.63 -0.212 trs5_8 b2192 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b2193 13813 12418 1.11 0.046 5148 4101 1.26 0.099 13116 4625 0.077391 0.027842 N4 3 1 1359 2.78 0.444 narP b2193 nitrate/nitrite response regulator (sensor NarQ) Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b2194 2015 1623 1.24 0.094 1319 1158 1.14 0.057 1819 1239 0.010734 0.007458 P4 3 1 1360 1.44 0.158 ccmH b2194 possible subunit of heme lyase Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b2195 9038 8053 1.12 0.050 4573 1826 2.50 0.399 8546 3200 0.050425 0.019264 B6 3 1 1361 2.62 0.418 dsbE b2195 disulfide oxidoreductase (in biogenesis of cytochrome c? Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b2196 3557 3715 -1.04 -0.019 2194 2492 -1.14 -0.055 3636 2343 0.021452 0.014106 D6 3 1 1362 1.52 0.182 ccmF b2196 cytochrome c-type biogenesis protein Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b2197 327 421 -1.00 0.000 382 424 -1.00 0.000 374 403 0.002206 0.002426 F6 3 1 1363 -1.00 0.000 ccmE b2197 "cytochrome c biogenesis, possible subunit of a heme lyase" Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b2198 562 175 1.12 0.051 299 117 1.00 0.000 368 208 0.002174 0.001250 H6 3 1 1364 1.00 0.000 ccmD b2198 heme exporter protein C Transport and binding proteins "transport; Protein, peptide secretion" b2199 642 288 1.28 0.109 441 643 -1.29 -0.109 465 542 0.002746 0.003262 J6 3 1 1365 -1.09 -0.036 ccmC b2199 heme exporter protein C Transport and binding proteins "transport; Protein, peptide secretion" b2200 888 293 1.78 0.249 1406 1749 -1.24 -0.095 590 1578 0.003483 0.009499 L6 3 1 1366 -2.73 -0.436 ccmB b2200 "heme exporter protein B, cytochrome c-type biogenesis protein" Transport and binding proteins "transport; Protein, peptide secretion" b2201 50976 45450 1.12 0.050 15122 14802 1.02 0.009 48213 14962 0.284492 0.090080 N6 3 1 1367 3.16 0.499 ccmA b2201 ATP binding protein of heme exporter A Transport and binding proteins "transport; Protein, peptide secretion" b2202 952 798 1.19 0.076 543 422 1.09 0.036 875 483 0.005164 0.002905 P6 3 1 1368 1.72 0.236 napC b2202 cytochrome c-type protein Putative enzymes "putative enzyme; Energy metabolism, carbon: Electron transport" b2203 220 -15 1.00 0.000 173 72 1.00 0.000 103 123 0.000605 0.000738 B8 3 1 1369 -1.00 0.000 napB b2203 cytochrome c-type protein Energy metabolism "carrier; Energy metabolism, carbon: Electron transport" b2204 924 1151 -1.25 -0.096 670 261 1.34 0.127 1037 465 0.006120 0.002800 D8 3 1 1370 2.04 0.310 napH b2204 ferredoxin-type protein: electron transfer Energy metabolism "carrier; Energy metabolism, carbon: Electron transport" b2205 39310 37479 1.05 0.021 26857 23480 1.14 0.058 38395 25169 0.226555 0.151529 F8 3 1 1371 1.50 0.175 napG b2205 ferredoxin-type protein: electron transfer Energy metabolism "carrier; Energy metabolism, carbon: Electron transport" b2206 2794 1871 1.49 0.174 1736 894 1.94 0.288 2332 1315 0.013763 0.007918 H8 3 1 1372 1.74 0.240 napA b2206 probable nitrate reductase 3 Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b2207 6519 4980 1.31 0.117 4404 4723 -1.07 -0.030 5749 4564 0.033925 0.027476 A20 1 3 3529 1.23 0.092 napD b2207 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2208 235 233 1.00 0.000 201 76 1.00 0.000 234 139 0.001381 0.000835 J8 3 1 1373 1.00 0.000 napF b2208 ferredoxin-type protein: electron transfer Energy metabolism "carrier; Energy metabolism, carbon: Electron transport" b2209 5360 3544 1.51 0.180 10395 8404 1.24 0.092 4452 9399 0.026267 0.056589 G1 3 2 1732 -2.15 -0.333 eco b2209 "ecotin, a serine protease inhibitor" Regulatory function "regulator; Degradation of proteins, peptides, glyco" b2210 1912 1948 -1.02 -0.008 1609 1856 -1.15 -0.062 1930 1733 0.011387 0.010432 C20 1 3 3530 1.09 0.038 yojH b2210 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2211 3802 4265 -1.12 -0.050 3982 4062 -1.02 -0.009 4033 4022 0.023798 0.024215 F7 3 1 987 -1.02 -0.008 yojI b2211 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b2212 1137 1184 -1.04 -0.017 676 703 -1.04 -0.017 1160 689 0.006847 0.004151 A5 1 2 1553 1.65 0.217 alkB b2212 DNA repair system specific for alkylated DNA "DNA replication, repair, restriction/modification" "putative enzyme; DNA - replication, repair, restriction/modification" b2213 997 742 1.34 0.128 437 407 1.00 0.000 869 422 0.005130 0.002540 C5 1 2 1554 1.71 0.233 ada b2213 O6-methylguanine-DNA methyltransferase; transcription activator/repressor "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2214 713 539 1.32 0.121 825 673 1.23 0.088 626 749 0.003695 0.004510 E20 1 3 3531 -1.22 -0.086 yojL b2214 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2215 22351 23697 -1.06 -0.025 26282 28495 -1.08 -0.035 23024 27389 0.135857 0.164895 M4 2 1 495 -1.21 -0.084 ompC b2215 outer membrane protein 1b (Ib;c) Cell structure membrane; Outer membrane constituents b2216 2751 2468 1.11 0.047 1563 1425 1.10 0.040 2610 1494 0.015398 0.008994 I11 3 1 237 1.71 0.234 yojN b2216 putative 2-component sensor protein Putative regulatory proteins putative regulator; Not classified b2217 1401 1935 -1.38 -0.140 539 716 -1.33 -0.123 1668 627 0.009843 0.003778 O4 2 1 496 2.61 0.416 rcsB b2217 "positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)" Regulatory function regulator; Surface polysaccharides & antigens b2218 1709 2501 -1.46 -0.165 1232 2005 -1.63 -0.211 2105 1618 0.012419 0.009744 A6 2 1 497 1.27 0.105 rcsC b2218 "sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB" Cell structure enzyme; Surface polysaccharides & antigens b2219 2423 2330 1.04 0.017 664 561 1.18 0.073 2377 612 0.014025 0.003685 K11 3 1 238 3.81 0.580 atoS b2219 sensor protein AtoS for response regulator AtoC Regulatory function regulator; Not classified b2220 1444 1470 -1.02 -0.008 1267 1240 1.02 0.010 1457 1254 0.008598 0.007548 O12 2 2 2064 1.14 0.057 atoC b2220 "response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS)" Regulatory function regulator; Degradation of small molecules: Fatty acids b2221 5493 5765 -1.05 -0.021 2544 3003 -1.18 -0.072 5629 2773 0.033215 0.016697 J23 2 2 2493 1.99 0.299 atoD b2221 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit Fatty acid and phospholipid metabolism enzyme; Degradation of small molecules: Fatty acids b2222 3515 3026 1.16 0.065 1732 1872 -1.08 -0.034 3270 1802 0.019296 0.010850 L23 2 2 2494 1.78 0.250 atoA b2222 acetyl-CoA:acetoacetyl-CoA transferase beta subunit Fatty acid and phospholipid metabolism enzyme; Degradation of small molecules: Fatty acids b2223 590 234 1.18 0.072 790 586 1.35 0.129 412 688 0.002429 0.004143 G20 1 3 3532 -1.38 -0.140 atoE b2223 short chain fatty acid transporter Transport and binding proteins transport; Degradation of small molecules: Fatty acids b2224 8034 8674 -1.08 -0.033 5041 4793 1.05 0.022 8354 4917 0.049296 0.029601 N23 2 2 2495 1.67 0.222 atoB b2224 acetyl-CoA acetyltransferase Fatty acid and phospholipid metabolism enzyme; Degradation of small molecules: Fatty acids b2225 913 609 1.50 0.176 639 641 -1.00 -0.001 761 640 0.004490 0.003852 I20 1 3 3533 1.17 0.067 b2225 b2225 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2226 567 587 -1.03 -0.015 386 401 -1.00 0.000 577 393 0.003405 0.002369 K20 1 3 3534 1.13 0.055 b2226 b2226 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2227 4364 3522 1.24 0.093 3921 4040 -1.03 -0.013 3943 3980 0.023268 0.023964 M20 1 3 3535 -1.03 -0.013 b2227 b2227 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2228 227 265 -1.00 0.000 520 628 -1.21 -0.082 246 574 0.001451 0.003454 O20 1 3 3536 -1.15 -0.061 b2228 b2228 putative membrane protein putative membrane protein putative membrane; Not classified b2229 2097 1867 1.12 0.051 1254 1448 -1.15 -0.062 1982 1351 0.011695 0.008133 A22 1 3 3537 1.44 0.158 b2229 b2229 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2230 1555 891 1.74 0.242 1305 995 1.31 0.118 1223 1150 0.007217 0.006923 C22 1 3 3538 1.04 0.018 yfaA b2230 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2231 7174 6419 1.12 0.048 6878 7503 -1.09 -0.038 6797 7190 0.040106 0.043291 E5 1 2 1555 -1.08 -0.033 gyrA b2231 "DNA gyrase, subunit A, type II topoisomerase" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2232 3379 4720 -1.40 -0.145 3017 3236 -1.07 -0.030 4049 3127 0.023895 0.018825 H7 1 2 2332 1.27 0.104 ubiG b2232 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b2233 127 45 1.00 0.000 36 94 -1.00 0.000 86 65 0.000507 0.000392 E22 1 3 3539 1.00 0.000 yfaL b2233 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b2234 9406 9637 -1.02 -0.011 12551 12017 1.04 0.019 9521 12284 0.056183 0.073957 G24 1 2 2012 -1.32 -0.119 nrdA b2234 "ribonucleoside diphosphate reductase 1, alpha subunit, B1" Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b2235 800 890 -1.11 -0.046 1724 1440 1.20 0.078 845 1582 0.004988 0.009523 I24 1 2 2013 -1.91 -0.281 nrdB b2235 "ribonucleoside-diphosphate reductase 1, beta subunit, B2" Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b2236 662 610 1.09 0.036 670 874 -1.30 -0.115 636 772 0.003753 0.004647 G22 1 3 3540 -1.24 -0.093 yfaE b2236 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2237 486 417 1.00 0.000 403 268 1.00 0.000 451 336 0.002664 0.002020 F10 1 1 1187 1.00 0.000 inaA b2237 pH-inducible protein involved in stress response Cell processes "phenotype; Adaptations, atypical conditions" b2238 196 166 1.00 0.000 156 95 1.00 0.000 181 126 0.001067 0.000756 I22 1 3 3541 1.00 0.000 yfaH b2238 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2239 504 858 -1.70 -0.231 549 129 1.10 0.041 681 339 0.004021 0.002041 G16 3 2 2172 1.34 0.127 glpQ b2239 "glycerophosphodiester phosphodiesterase, periplasmic" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2240 13324 16500 -1.24 -0.093 15603 15597 1.00 0.000 14912 15600 0.087993 0.093919 I24 4 1 765 -1.07 -0.028 glpT b2240 sn-glycerol-3-phosphate permease Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2241 771 379 1.54 0.188 667 533 1.25 0.097 575 600 0.003395 0.003614 L8 3 1 1374 -1.06 -0.027 glpA b2241 "sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2242 6250 5687 1.10 0.041 3566 4069 -1.14 -0.057 5968 3817 0.035217 0.022983 N8 3 1 1375 1.53 0.185 glpB b2242 "sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2243 3245 2963 1.10 0.040 1608 1671 -1.04 -0.017 3104 1639 0.018314 0.009869 P8 3 1 1376 1.86 0.268 glpC b2243 "sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2244 213 263 -1.00 0.000 387 259 1.00 0.000 238 323 0.001403 0.001946 K22 1 3 3542 -1.00 0.000 yfaD b2244 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2245 247 302 -1.00 0.000 462 296 1.00 0.000 275 379 0.001621 0.002283 M22 1 3 3543 -1.00 0.000 b2245 b2245 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2246 3699 3392 1.09 0.038 2021 1889 1.07 0.029 3546 1955 0.020923 0.011769 H7 3 1 988 1.78 0.250 b2246 b2246 putative transport protein Putative transport proteins putative transport; Not classified b2247 3939 2196 1.79 0.254 2798 3156 -1.13 -0.052 3068 2977 0.018103 0.017923 P23 2 2 2496 1.01 0.004 b2247 b2247 putative racemase Putative enzymes putative enzyme; Not classified b2248 628 554 1.13 0.054 235 335 -1.00 0.000 591 285 0.003487 0.001715 M11 3 1 239 1.16 0.065 b2248 b2248 putative regulator Putative regulatory proteins putative regulator; Not classified b2249 658 892 -1.36 -0.132 1258 1357 -1.08 -0.033 775 1308 0.004572 0.007872 O22 1 3 3544 -1.72 -0.236 b2249 b2249 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2250 6225 4609 1.35 0.131 4310 4730 -1.10 -0.040 5417 4520 0.031964 0.027212 J10 2 3 3545 1.17 0.070 b2250 b2250 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2251 630 500 1.26 0.100 384 282 1.00 0.000 565 333 0.003333 0.002004 C24 1 3 3546 1.11 0.046 yfaO b2251 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2252 2277 2510 -1.10 -0.042 1194 1289 -1.08 -0.033 2393 1242 0.014123 0.007476 F13 4 2 2643 1.89 0.276 ais b2252 protein induced by aluminum Putative factors phenotype; Not classified b2253 -205 662 -1.32 -0.122 -53 702 -1.40 -0.147 229 325 0.001348 0.001955 C6 2 1 498 -1.00 0.000 b2253 b2253 putative enzyme Putative enzymes putative enzyme; Not classified b2254 1118 1371 -1.23 -0.089 834 752 1.11 0.045 1245 793 0.007344 0.004774 B1 3 2 2497 1.54 0.187 b2254 b2254 putative sugar transferase Putative enzymes putative enzyme; Not classified b2255 1887 1193 1.58 0.199 1336 1288 1.04 0.016 1540 1312 0.009087 0.007899 D1 3 2 2498 1.15 0.061 b2255 b2255 putative transformylase Putative enzymes putative enzyme; Not classified b2256 472 468 1.00 0.000 233 368 -1.00 0.000 470 301 0.002775 0.001809 E24 1 3 3547 1.00 0.000 b2256 b2256 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2257 1319 1149 1.15 0.060 467 654 -1.31 -0.116 1234 560 0.007281 0.003374 G24 1 3 3548 2.16 0.334 b2257 b2257 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2258 2072 1654 1.25 0.098 1779 1525 1.17 0.067 1863 1652 0.010993 0.009945 J7 3 1 989 1.11 0.044 b2258 b2258 putative transport/receptor protein Putative transport proteins putative transport; Not classified b2259 492 411 1.00 0.000 69 240 -1.00 0.000 451 154 0.002663 0.000929 H10 1 1 1188 1.00 0.000 pmrD b2259 polymyxin resistance protein B Putative transport proteins putative transport; Drug/analog sensitivity b2260 5046 4323 1.17 0.067 5239 5130 1.02 0.009 4685 5185 0.027642 0.031216 J7 1 2 2333 -1.13 -0.053 menE b2260 o-succinylbenzoate-CoA ligase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b2261 1639 1740 -1.06 -0.026 1293 884 1.46 0.165 1689 1088 0.009969 0.006553 L7 1 2 2334 1.52 0.182 menC b2261 o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b2262 1935 1780 1.09 0.036 1913 1948 -1.02 -0.008 1858 1930 0.010961 0.011621 N7 1 2 2335 -1.06 -0.025 menB b2262 dihydroxynaphtoic acid synthetase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b2263 2250 2092 1.08 0.032 1636 1509 1.08 0.035 2171 1573 0.012810 0.009468 F1 3 2 2499 1.35 0.131 yfbB b2263 putative enzyme Putative enzymes putative enzyme; Not classified b2264 319 432 -1.00 0.000 376 295 1.00 0.000 376 335 0.002216 0.002019 P7 1 2 2336 1.00 0.000 menD b2264 2-oxoglutarate decarboxylase; SHCHC synthase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b2265 256 222 1.00 0.000 259 450 -1.00 0.000 239 355 0.001409 0.002135 B9 1 2 2337 -1.00 0.000 menF b2265 "isochorismate hydroxymutase 2, menaquinone biosynthesis" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b2266 5349 3997 1.34 0.127 744 671 1.11 0.045 4673 707 0.027574 0.004258 I24 1 3 3549 6.48 0.811 elaB b2266 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2267 1368 1034 1.32 0.122 637 539 1.18 0.072 1201 588 0.007087 0.003539 K24 1 3 3550 2.00 0.302 elaA b2267 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2268 2067 1987 1.04 0.017 586 512 1.15 0.059 2027 549 0.011959 0.003303 M24 1 3 3551 3.62 0.559 elaC b2268 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2269 1116 887 1.26 0.100 971 768 1.26 0.102 1002 869 0.005911 0.005234 H1 3 2 2500 1.13 0.053 elaD b2269 putative sulfatase / phosphatase Putative enzymes putative enzyme; Not classified b2270 680 614 1.11 0.045 444 628 -1.26 -0.099 647 536 0.003818 0.003226 O24 1 3 3552 1.18 0.073 yfbK b2270 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2271 797 658 1.21 0.083 334 507 -1.01 -0.006 727 420 0.004291 0.002529 G5 1 2 1556 1.43 0.155 yfbL b2271 putative aminopeptidase Putative enzymes putative enzyme; Not classified b2272 1377 1784 -1.30 -0.113 1148 1455 -1.27 -0.103 1581 1302 0.009326 0.007836 A2 2 3 3553 1.19 0.076 yfbM b2272 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2273 1181 1159 1.02 0.008 456 748 -1.50 -0.175 1170 602 0.006903 0.003624 C2 2 3 3554 1.91 0.280 yfbN b2273 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2274 353 506 -1.01 -0.005 233 337 -1.00 0.000 430 285 0.002536 0.001716 E2 2 3 3555 1.00 0.000 b2274 b2274 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2275 1025 833 1.23 0.090 319 743 -1.49 -0.172 929 531 0.005482 0.003196 G2 2 3 3556 1.72 0.234 b2275 b2275 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2276 1345 402 2.69 0.430 2419 1998 1.21 0.083 873 2209 0.005154 0.013298 B10 3 1 1377 -2.58 -0.412 nuoN b2276 NADH dehydrogenase I chain N Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2277 762 817 -1.07 -0.030 2571 2757 -1.07 -0.030 790 2664 0.004659 0.016039 D10 3 1 1378 -3.44 -0.537 nuoM b2277 NADH dehydrogenase I chain M Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2278 882 623 1.41 0.151 1933 1581 1.22 0.087 752 1757 0.004440 0.010577 F10 3 1 1379 -2.38 -0.377 nuoL b2278 NADH dehydrogenase I chain L Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2279 411 154 1.00 0.000 817 570 1.43 0.156 283 693 0.001670 0.004175 H10 3 1 1380 -1.39 -0.143 nuoK b2279 NADH dehydrogenase I chain K Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2280 13898 12384 1.12 0.050 4879 4945 -1.01 -0.006 13141 4912 0.077542 0.029573 J10 3 1 1381 2.62 0.419 nuoJ b2280 NADH dehydrogenase I chain J Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2281 1803 1496 1.20 0.081 2652 3038 -1.15 -0.059 1649 2845 0.009733 0.017130 L10 3 1 1382 -1.76 -0.246 nuoI b2281 NADH dehydrogenase I chain I Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2282 2246 2110 1.06 0.027 4509 4370 1.03 0.014 2178 4440 0.012850 0.026729 N10 3 1 1383 -2.08 -0.318 nuoH b2282 NADH dehydrogenase I chain H Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2283 7762 9222 -1.19 -0.075 7645 7331 1.04 0.018 8492 7488 0.050109 0.045081 P10 3 1 1384 1.11 0.046 nuoG b2283 NADH dehydrogenase I chain G Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2284 3982 2369 1.68 0.225 4863 4674 1.04 0.017 3176 4768 0.018740 0.028708 B12 3 1 1385 -1.53 -0.185 nuoF b2284 NADH dehydrogenase I chain F Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2285 2195 2606 -1.19 -0.075 3782 3043 1.24 0.094 2400 3413 0.014164 0.020546 D12 3 1 1386 -1.45 -0.162 nuoE b2285 NADH dehydrogenase I chain E Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2286 16389 15707 1.04 0.018 14515 13744 1.06 0.024 16048 14129 0.094694 0.085067 I2 2 3 3557 1.11 0.047 nuoC b2286 "NADH dehydrogenase I chain C, D" Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2287 2311 1547 1.49 0.174 4311 4442 -1.03 -0.013 1929 4376 0.011383 0.026347 F12 3 1 1387 -2.31 -0.364 nuoB b2287 NADH dehydrogenase I chain B Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2288 2118 1787 1.18 0.074 2077 1840 1.13 0.053 1952 1959 0.011520 0.011793 H12 3 1 1388 -1.02 -0.010 nuoA b2288 NADH dehydrogenase I chain A Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2289 1414 641 2.21 0.344 323 -55 1.00 0.000 1027 134 0.006061 0.000806 J12 3 1 1389 2.02 0.305 lrhA b2289 "NADH dehydrogenase transcriptional regulator, LysR family" Regulatory function "regulator; Energy metabolism, carbon: Aerobic respiration" b2290 5585 4360 1.28 0.108 4505 4228 1.07 0.028 4973 4367 0.029342 0.026291 J1 3 2 2501 1.12 0.048 b2290 b2290 putative aminotransferase Putative enzymes putative enzyme; Not classified b2291 521 649 -1.24 -0.095 334 498 -1.00 0.000 585 416 0.003453 0.002504 A10 3 1 609 1.15 0.061 b2291 b2291 putative alpha helix protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2292 341 268 1.00 0.000 250 234 1.00 0.000 304 242 0.001795 0.001457 M19 4 1 367 1.00 0.000 yfbS b2292 putative transport protein Putative transport proteins putative transport; Not classified b2293 4115 3982 1.03 0.014 2370 2455 -1.04 -0.015 4049 2412 0.023890 0.014523 L1 3 2 2502 1.65 0.216 yfbT b2293 putative phosphatase Putative enzymes putative enzyme; Not classified b2294 836 1252 -1.50 -0.176 762 749 1.02 0.007 1044 755 0.006161 0.004547 K2 2 3 3558 1.35 0.132 b2294 b2294 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2295 -152 411 -1.00 0.000 -473 466 -1.00 0.000 130 -3 0.000764 -0.000020 M2 2 3 3559 1.00 0.000 b2295 b2295 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2296 3352 3040 1.10 0.042 8790 8697 1.01 0.005 3196 8743 0.018860 0.052640 L12 3 1 1390 -2.79 -0.446 ackA b2296 acetate kinase Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b2297 3541 3280 1.08 0.033 3933 4100 -1.04 -0.018 3410 4016 0.020124 0.024180 C13 1 1 50 -1.20 -0.080 pta b2297 phosphotransacetylase Energy metabolism enzyme; Degradation of small molecules: Carbon compounds b2298 2063 1017 2.03 0.307 2064 1662 1.24 0.094 1540 1863 0.009088 0.011215 N1 3 2 2503 -1.23 -0.091 yfcC b2298 putative S-transferase Putative enzymes putative enzyme; Not classified b2299 5240 4354 1.20 0.080 1675 1826 -1.09 -0.038 4797 1751 0.028308 0.010541 O11 3 1 240 2.69 0.429 b2299 b2299 putative regulator Putative regulatory proteins putative regulator; Not classified b2300 1376 1068 1.29 0.110 987 1529 -1.55 -0.190 1222 1258 0.007211 0.007575 O2 2 3 3560 -1.05 -0.021 yfcE b2300 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2301 1354 1346 1.01 0.003 1181 1955 -1.66 -0.219 1350 1568 0.007967 0.009440 A4 2 3 3561 -1.18 -0.074 yfcF b2301 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2302 893 686 1.30 0.115 558 362 1.12 0.048 789 460 0.004658 0.002768 I16 3 2 2173 1.55 0.191 yfcG b2302 putative S-transferase Putative enzymes putative enzyme; Not classified b2303 1392 1379 1.01 0.004 1166 629 1.85 0.268 1386 897 0.008176 0.005401 D9 1 2 2338 1.51 0.180 folX b2303 "D-erythro-7,8-dihydroneopterin tri P epimerase" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2304 19115 18815 1.02 0.007 16335 16961 -1.04 -0.016 18965 16648 0.111907 0.100231 F8 2 3 2504 1.12 0.048 b2304 b2304 putative sugar nucleotide epimerase Putative enzymes putative enzyme; Not classified b2305 273 699 -1.40 -0.146 190 454 -1.00 0.000 486 322 0.002870 0.001937 C4 2 3 3562 1.00 0.000 yfcI b2305 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2306 429 373 1.00 0.000 447 359 1.00 0.000 401 403 0.002367 0.002427 K24 4 1 766 -1.00 0.000 hisP b2306 ATP-binding component of histidine transport Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2307 180 341 -1.00 0.000 237 165 1.00 0.000 261 201 0.001539 0.001210 M24 4 1 767 1.00 0.000 hisM b2307 "histidine transport, membrane protein M" Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2308 520 324 1.04 0.017 720 552 1.31 0.116 422 636 0.002490 0.003828 K16 3 2 2174 -1.28 -0.106 hisQ b2308 histidine transport system permease protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2309 1704 1737 -1.02 -0.008 1686 1602 1.05 0.022 1720 1644 0.010152 0.009899 O24 4 1 768 1.03 0.011 hisJ b2309 histidine-binding periplasmic protein of high-affinity histidine transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2310 1350 1053 1.28 0.108 1174 987 1.19 0.075 1201 1080 0.007089 0.006504 B1 1 1 769 1.09 0.037 argT b2310 "lysine-, arginine-, ornithine-binding periplasmic protein" Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2311 9732 7611 1.28 0.107 5667 5839 -1.03 -0.013 8672 5753 0.051169 0.034635 F9 1 2 2339 1.48 0.169 ubiX b2311 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Putative enzymes putative enzyme; Not classified b2312 3242 2826 1.15 0.060 2081 2581 -1.24 -0.093 3034 2331 0.017901 0.014034 K24 1 2 2014 1.28 0.106 purF b2312 amidophosphoribosyltransferase = PRPP amidotransferase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2313 536 322 1.07 0.030 290 490 -1.00 0.000 429 390 0.002530 0.002350 O19 4 1 368 1.00 0.000 cvpA b2313 membrane protein required for colicin V production Cell processes membrane; Colicin-related functions b2314 805 1128 -1.40 -0.146 927 1022 -1.10 -0.043 966 974 0.005703 0.005867 E4 2 3 3563 -1.03 -0.012 dedD b2314 putative lipoprotein putative membrane protein putative membrane; Not classified b2315 14496 10319 1.40 0.148 11697 11412 1.02 0.011 12408 11555 0.073213 0.069567 H9 1 2 2340 1.05 0.022 folC b2315 dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b2316 10935 12394 -1.13 -0.054 12904 13196 -1.02 -0.010 11665 13050 0.068830 0.078566 A14 2 2 2065 -1.14 -0.057 accD b2316 "acetylCoA carboxylase, carboxytransferase component, beta subunit" Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b2317 2478 2638 -1.06 -0.027 2452 3307 -1.35 -0.130 2558 2880 0.015093 0.017338 G4 2 3 3564 -1.15 -0.060 dedA b2317 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2318 5148 5577 -1.08 -0.035 11041 10758 1.03 0.011 5362 10900 0.031641 0.065622 I1 3 2 1733 -2.07 -0.317 truA b2318 pseudouridylate synthase I "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b2319 3767 3794 -1.01 -0.003 2095 2115 -1.01 -0.004 3780 2105 0.022306 0.012673 J10 1 1 1189 1.76 0.246 usg b2319 putative PTS system enzyme II A component Putative transport proteins putative transport; Not classified b2320 1887 2191 -1.16 -0.065 1827 1627 1.12 0.051 2039 1727 0.012032 0.010397 J9 1 2 2341 1.16 0.063 pdxB b2320 erythronate-4-phosphate dehyrogenase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" b2321 2020 1942 1.04 0.017 1543 1320 1.17 0.068 1981 1431 0.011690 0.008618 L10 1 1 1190 1.36 0.132 div b2321 cell division protein Cell processes factor; Cell division b2322 2155 1902 1.13 0.054 2738 1557 1.76 0.245 2029 2148 0.011970 0.012930 L7 3 1 990 -1.08 -0.033 b2322 b2322 putative transport protein Putative transport proteins putative transport; Not classified b2323 2911 3611 -1.24 -0.094 4560 5325 -1.17 -0.067 3261 4943 0.019241 0.029758 C14 2 2 2066 -1.55 -0.189 fabB b2323 3-oxoacyl-[acyl-carrier-protein] synthase I Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b2324 12373 11167 1.11 0.045 6339 6529 -1.03 -0.013 11770 6434 0.069451 0.038736 B3 3 2 2505 1.79 0.254 b2324 b2324 putative peptidase Putative enzymes putative enzyme; Not classified b2325 2449 3081 -1.26 -0.100 3134 3475 -1.11 -0.045 2765 3304 0.016316 0.019894 I4 2 3 3565 -1.22 -0.086 b2325 b2325 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2326 1400 995 1.41 0.148 1912 2013 -1.05 -0.022 1198 1963 0.007067 0.011816 A13 3 1 241 -1.67 -0.223 b2326 b2326 putative transporting ATPase Putative enzymes putative enzyme; Not classified b2327 442 579 -1.16 -0.064 391 423 -1.00 0.000 510 407 0.003011 0.002449 C10 3 1 610 1.00 0.002 yfcA b2327 putative structural protein Putative cell structure putative structure; Not classified b2328 1206 1723 -1.43 -0.155 606 989 -1.63 -0.212 1464 798 0.008641 0.004801 E6 2 1 499 1.80 0.255 mepA b2328 "murein DD-endopeptidase, penicillin-insensitive" Cell structure "enzyme; Murein sacculus, peptidoglycan" b2329 1910 2492 -1.30 -0.116 1612 1466 1.10 0.041 2201 1539 0.012986 0.009264 I21 4 2 1909 1.40 0.147 aroC b2329 chorismate synthase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Chorismate b2330 26701 25954 1.03 0.012 14335 14531 -1.01 -0.006 26328 14433 0.155352 0.086894 D3 3 2 2506 1.79 0.252 yfcB b2330 putative adenine-specific methylase Putative enzymes putative enzyme; Not classified b2331 1063 1350 -1.27 -0.104 1015 1417 -1.40 -0.145 1207 1216 0.007120 0.007319 K4 2 3 3566 -1.03 -0.012 b2331 b2331 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2332 718 687 1.04 0.019 394 758 -1.52 -0.181 703 576 0.004146 0.003467 M4 2 3 3567 1.20 0.078 b2332 b2332 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2333 180 400 -1.00 0.000 107 261 -1.00 0.000 290 184 0.001714 0.001108 G6 2 1 500 1.00 0.000 b2333 b2333 putative fimbrial-like protein Putative cell structure putative structure; Not classified b2334 816 1231 -1.51 -0.178 786 1338 -1.70 -0.231 1024 1062 0.006039 0.006393 O4 2 3 3568 -1.06 -0.025 b2334 b2334 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2335 421 543 -1.09 -0.036 211 233 -1.00 0.000 482 222 0.002844 0.001334 I6 2 1 501 1.00 0.000 b2335 b2335 putative fimbrial protein Putative cell structure putative structure; Not classified b2336 3264 4379 -1.34 -0.128 2164 2321 -1.07 -0.030 3822 2243 0.022551 0.013502 J2 2 1 1253 1.67 0.223 yfcS b2336 putative chaperone Putative factors putative factor; Not classified b2337 248 470 -1.00 0.000 27 453 -1.00 0.000 359 240 0.002116 0.001444 A6 2 3 3569 1.00 0.000 b2337 b2337 putative outer membrane protein putative membrane protein putative membrane; Not classified b2338 20006 16281 1.23 0.090 12730 11987 1.06 0.026 18144 12359 0.107060 0.074406 E10 3 1 611 1.44 0.158 yfcU b2338 putative outer membrane protein putative membrane protein putative membrane; Not classified b2339 -112 173 -1.00 0.000 -78 51 -1.00 0.000 30 -14 0.000180 -0.000082 K6 2 1 502 1.00 0.000 b2339 b2339 putative fimbrial-like protein Putative cell structure putative structure; Not classified b2340 268 89 1.00 0.000 128 23 1.00 0.000 179 75 0.001055 0.000453 C6 2 3 3570 1.00 0.000 b2340 b2340 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2341 1380 1958 -1.42 -0.152 1468 1602 -1.09 -0.038 1669 1535 0.009850 0.009243 E14 2 2 2067 1.07 0.028 b2341 b2341 putative enzyme Putative enzymes putative enzyme; Not classified b2342 870 667 1.30 0.116 637 531 1.20 0.078 768 584 0.004534 0.003516 M16 3 2 2175 1.29 0.110 b2342 b2342 putative acyltransferase Putative enzymes putative enzyme; Not classified b2343 680 710 -1.04 -0.019 646 960 -1.49 -0.172 695 803 0.004100 0.004836 E6 2 3 3571 -1.18 -0.072 b2343 b2343 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2344 585 559 1.05 0.020 2017 1741 1.16 0.064 572 1879 0.003377 0.011312 D1 1 1 770 -3.35 -0.525 fadL b2344 transport of long-chain fatty acids; sensitivity to phage T2 Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2345 361 928 -1.86 -0.269 187 521 -1.04 -0.018 644 354 0.003802 0.002132 G6 2 3 3572 1.27 0.103 b2345 b2345 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2346 1300 1053 1.23 0.091 1767 1779 -1.01 -0.003 1177 1773 0.006942 0.010674 A4 3 1 585 -1.54 -0.187 vacJ b2346 lipoprotein precursor Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b2347 1661 1346 1.23 0.091 1103 886 1.25 0.095 1503 995 0.008871 0.005989 N7 3 1 991 1.48 0.171 yfdC b2347 putative transport Putative transport proteins putative transport; Not classified b2349 9600 8657 1.11 0.045 7443 6693 1.11 0.046 9128 7068 0.053864 0.042552 A21 4 1 369 1.27 0.102 intC b2349 putative prophage Sf6-like integrase "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b2350 487 713 -1.43 -0.154 529 670 -1.27 -0.103 600 600 0.003538 0.003611 I6 2 3 3573 -1.02 -0.009 b2350 b2350 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2351 910 1104 -1.21 -0.084 1319 1265 1.04 0.018 1007 1292 0.005941 0.007777 M6 2 1 503 -1.31 -0.117 b2351 b2351 putative glycan biosynthesis enzyme Putative enzymes putative enzyme; Not classified b2352 411 587 -1.17 -0.069 97 715 -1.43 -0.155 499 406 0.002943 0.002443 K6 2 3 3574 1.00 0.000 b2352 b2352 putative ligase Putative enzymes putative enzyme; Not classified b2353 15753 13732 1.15 0.060 21467 20213 1.06 0.026 14742 20840 0.086991 0.125470 M6 2 3 3575 -1.44 -0.159 b2353 b2353 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2354 4924 5294 -1.08 -0.031 11898 12686 -1.07 -0.028 5109 12292 0.030147 0.074006 O6 2 3 3576 -2.45 -0.390 b2354 b2354 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2355 603 452 1.21 0.082 561 383 1.12 0.050 528 472 0.003115 0.002842 F3 3 2 2507 1.04 0.016 yfdL b2355 putative RNA polymerase beta Putative enzymes putative enzyme; Not classified b2356 220 205 1.00 0.000 90 143 -1.00 0.000 212 116 0.001253 0.000701 A8 2 3 3577 1.00 0.000 yfdM b2356 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2357 6547 7594 -1.16 -0.064 2681 2832 -1.06 -0.024 7071 2756 0.041721 0.016595 C8 2 3 3578 2.51 0.400 yfdN b2357 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2358 3283 3201 1.03 0.011 2084 2661 -1.28 -0.106 3242 2372 0.019132 0.014282 E8 2 3 3579 1.34 0.127 yfdO b2358 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2359 973 857 1.14 0.055 472 499 -1.00 0.000 915 486 0.005398 0.002925 G8 2 3 3580 1.80 0.255 b2359 b2359 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2360 376 314 1.00 0.000 264 246 1.00 0.000 345 255 0.002036 0.001535 I8 2 3 3581 1.00 0.000 b2360 b2360 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2361 451 447 1.00 0.000 331 362 -1.00 0.000 449 347 0.002650 0.002086 K8 2 3 3582 1.00 0.000 b2361 b2361 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2362 8170 7264 1.12 0.051 5295 5272 1.00 0.002 7717 5284 0.045536 0.031811 M8 2 3 3583 1.43 0.156 b2362 b2362 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2363 98 397 -1.00 0.000 45 351 -1.00 0.000 247 198 0.001459 0.001191 O8 2 3 3584 1.00 0.000 b2363 b2363 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2364 549 392 1.10 0.041 259 379 -1.00 0.000 471 319 0.002778 0.001921 K21 4 2 1910 1.00 0.000 dsdC b2364 D-serine dehydratase (deaminase) transcriptional activator Regulatory function regulator; Degradation of small molecules: Amino acids b2365 1274 1455 -1.14 -0.058 798 735 1.09 0.036 1364 766 0.008051 0.004612 P7 3 1 992 1.75 0.242 dsdX b2365 transport system permease (serine?) Putative transport proteins transport; Not classified b2366 977 1311 -1.34 -0.128 738 982 -1.33 -0.124 1144 860 0.006749 0.005180 M21 4 2 1911 1.30 0.115 dsdA b2366 D-serine dehydratase (deaminase) Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b2367 532 475 1.06 0.027 344 410 -1.00 0.000 504 377 0.002973 0.002269 N10 1 1 1191 1.00 0.000 emrY b2367 multidrug resistance protein Y Putative transport proteins putative transport; Drug/analog sensitivity b2368 213 565 -1.13 -0.053 492 422 1.00 0.000 389 457 0.002293 0.002751 P10 1 1 1192 -1.00 0.000 emrK b2368 multidrug resistance protein K Putative transport proteins putative transport; Drug/analog sensitivity b2369 3124 4662 -1.49 -0.174 1272 1098 1.16 0.064 3893 1185 0.022969 0.007134 G1 2 2 1636 3.22 0.508 evgA b2369 putative positive transcription regulator (sensor EvgS) Putative regulatory proteins putative regulator; Not classified b2370 62 188 -1.00 0.000 -180 147 -1.00 0.000 125 -16 0.000737 -0.000099 I1 2 2 1637 1.00 0.000 evgS b2370 putative sensor for regulator EvgA Putative regulatory proteins putative regulator; Not classified b2371 881 1055 -1.20 -0.078 687 749 -1.09 -0.038 968 718 0.005710 0.004325 A10 2 3 3585 1.32 0.121 yfdE b2371 putative enzyme Putative enzymes putative enzyme; Not classified b2372 1041 866 1.20 0.080 987 801 1.23 0.090 953 894 0.005625 0.005382 B9 3 1 993 1.05 0.019 b2372 b2372 putative receptor protein Putative factors putative factor; Not classified b2373 10377 7122 1.46 0.163 5282 4663 1.13 0.054 8749 4972 0.051626 0.029937 H3 3 2 2508 1.72 0.237 b2373 b2373 putative enzyme Putative enzymes putative enzyme; Not classified b2374 2135 2800 -1.31 -0.118 1639 1638 1.00 0.000 2467 1638 0.014558 0.009864 C10 2 3 3586 1.48 0.169 b2374 b2374 putative enzyme Putative enzymes putative enzyme; Not classified b2375 1305 1234 1.06 0.024 1054 1204 -1.14 -0.058 1269 1129 0.007489 0.006794 E10 2 3 3587 1.10 0.042 b2375 b2375 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2376 249 190 1.00 0.000 231 217 1.00 0.000 219 224 0.001295 0.001347 G10 2 3 3588 -1.00 0.000 b2376 b2376 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2377 37158 30950 1.20 0.079 28709 27621 1.04 0.017 34054 28165 0.200943 0.169570 I10 2 3 3589 1.19 0.074 b2377 b2377 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2378 968 836 1.16 0.064 741 793 -1.07 -0.030 902 767 0.005322 0.004617 K10 2 3 3590 1.15 0.062 ddg b2378 putative heat shock protein Putative factors putative factor; Not classified b2379 1010 1050 -1.04 -0.017 766 747 1.03 0.011 1030 756 0.006076 0.004554 O16 3 2 2176 1.33 0.125 b2379 b2379 putative aminotransferase Putative enzymes putative enzyme; Not classified b2380 1233 1119 1.10 0.042 682 575 1.19 0.074 1176 628 0.006941 0.003783 C13 3 1 242 1.83 0.264 b2380 b2380 putative sensor protein Putative regulatory proteins putative regulator; Not classified b2381 178 369 -1.00 0.000 227 115 1.00 0.000 273 171 0.001612 0.001030 M10 2 3 3591 1.00 0.000 b2381 b2381 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2382 786 525 1.50 0.175 378 386 -1.00 0.000 656 382 0.003871 0.002300 E13 3 1 243 1.29 0.111 b2382 b2382 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b2383 3136 2644 1.19 0.074 2942 2848 1.03 0.014 2890 2895 0.017055 0.017430 A18 3 2 2177 -1.02 -0.009 b2383 b2383 "putative PTS system enzyme IIA component, enzyme I" Putative transport proteins putative transport; Not classified b2384 911 1005 -1.10 -0.043 4364 3043 1.43 0.157 958 3703 0.005653 0.022297 O10 2 3 3592 -3.94 -0.596 b2384 b2384 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2385 5045 4691 1.08 0.032 8286 9214 -1.11 -0.046 4868 8750 0.028726 0.052680 K1 3 2 1734 -1.83 -0.263 b2385 b2385 putative peptidase Putative enzymes putative enzyme; Not classified b2386 503 619 -1.23 -0.090 430 493 -1.00 0.000 561 461 0.003310 0.002778 A12 2 3 3593 1.10 0.043 b2386 b2386 putative transport protein Putative transport proteins putative transport; Not classified b2387 397 243 1.00 0.000 204 115 1.00 0.000 320 160 0.001887 0.000960 F1 1 1 771 1.00 0.000 b2387 b2387 putative PTS system enzyme IIB component Putative transport proteins putative transport; Not classified b2388 1696 1305 1.30 0.114 1109 1073 1.03 0.014 1500 1091 0.008853 0.006569 E13 1 1 51 1.35 0.130 glk b2388 glucokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2389 5366 5362 1.00 0.000 8863 10288 -1.16 -0.065 5364 9575 0.031651 0.057650 C12 2 3 3594 -1.82 -0.260 b2389 b2389 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2390 1210 1122 1.08 0.033 899 1163 -1.29 -0.112 1166 1031 0.006879 0.006208 E12 2 3 3595 1.11 0.045 b2390 b2390 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2391 312 331 -1.00 0.000 58 165 -1.00 0.000 322 111 0.001897 0.000670 G12 2 3 3596 1.00 0.000 b2391 b2391 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2392 39222 48555 -1.24 -0.093 33357 31481 1.06 0.025 43888 32419 0.258970 0.195181 I12 2 3 3597 1.33 0.123 b2392 b2392 putative transport system permease Putative transport proteins putative transport; Not classified b2393 959 1276 -1.33 -0.124 1370 1377 -1.01 -0.002 1117 1374 0.006594 0.008271 H1 1 1 772 -1.25 -0.098 nupC b2393 permease of transport system for 3 nucleosides Transport and binding proteins "transport; Transport of small molecules: Nucleosides, purines, pyrimidines" b2394 1382 1673 -1.21 -0.083 2991 2966 1.01 0.004 1528 2978 0.009013 0.017931 C21 4 1 370 -1.99 -0.299 yi81_3 b2394 IS186 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b2395 1067 826 1.29 0.111 2258 2090 1.08 0.034 947 2174 0.005586 0.013089 K12 2 3 3598 -2.34 -0.370 yfeA b2395 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2398 160 302 -1.00 0.000 224 140 1.00 0.000 231 182 0.001363 0.001094 M12 2 3 3599 1.00 0.000 yfeC b2398 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2399 168 233 -1.00 0.000 164 359 -1.00 0.000 201 262 0.001184 0.001575 O12 2 3 3600 -1.00 0.000 yfeD b2399 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2400 2427 2416 1.00 0.002 4491 3733 1.20 0.080 2421 4112 0.014287 0.024758 M1 3 2 1735 -1.73 -0.239 gltX b2400 "glutamate tRNA synthetase, catalytic subunit" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b2405 1343 945 1.42 0.152 1057 1092 -1.03 -0.014 1144 1075 0.006751 0.006470 C18 3 2 2178 1.04 0.018 xapR b2405 regulator for xapA Regulatory function regulator; Central intermediary metabolism: Nucleotide interconversions b2406 1547 1651 -1.07 -0.028 2356 2308 1.02 0.009 1599 2332 0.009434 0.014038 J1 1 1 773 -1.49 -0.173 xapB b2406 xanthosine permease Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2407 1076 514 2.09 0.321 842 780 1.08 0.033 795 811 0.004691 0.004885 E18 3 2 2179 -1.04 -0.018 xapA b2407 xanthosine phosphorylase Central intermediary metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b2408 239 252 -1.00 0.000 359 -56 1.00 0.000 245 151 0.001447 0.000911 J3 3 2 2509 1.00 0.000 yfeN b2408 putative sugar hydrolase Putative enzymes putative enzyme; Not classified b2409 713 634 1.12 0.051 463 490 -1.00 0.000 674 477 0.003974 0.002871 G13 3 1 244 1.32 0.122 yfeR b2409 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b2410 1136 1189 -1.05 -0.020 2417 2187 1.10 0.043 1163 2302 0.006860 0.013858 L3 3 2 2510 -2.02 -0.305 yfeH b2410 putative cytochrome oxidase Putative enzymes putative enzyme; Not classified b2411 2382 1919 1.24 0.094 1485 1405 1.06 0.024 2150 1445 0.012689 0.008700 I5 1 2 1557 1.46 0.164 lig b2411 DNA ligase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2412 5112 3897 1.31 0.118 2959 3172 -1.07 -0.030 4504 3065 0.026578 0.018456 I13 3 1 245 1.44 0.158 zipA b2412 cell division protein involved in FtsZ ring Cell processes membrane; Cell division b2413 756 753 1.00 0.002 649 625 1.04 0.016 755 637 0.004453 0.003833 G18 3 2 2180 1.16 0.065 cysZ b2413 required for sulfate transport Transport and binding proteins transport; Transport of small molecules: Anions b2414 14429 11610 1.24 0.094 3972 4161 -1.05 -0.020 13019 4067 0.076823 0.024483 O21 4 2 1912 3.14 0.497 cysK b2414 "cysteine synthase A, O-acetylserine sulfhydrolase A" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Cysteine b2415 9920 11842 -1.19 -0.077 10061 8900 1.13 0.053 10881 9480 0.064207 0.057078 L1 1 1 774 1.12 0.051 ptsH b2415 PTS system protein HPr Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2416 9217 9026 1.02 0.009 6885 6589 1.04 0.019 9122 6737 0.053824 0.040559 N1 1 1 775 1.33 0.123 ptsI b2416 PEP-protein phosphotransferase system enzyme I Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2417 4245 3819 1.11 0.046 3337 3634 -1.09 -0.037 4032 3485 0.023789 0.020984 B4 2 3 776 1.13 0.054 crr b2417 "PTS system, glucose-specific IIA component" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2418 422 226 1.00 0.000 305 295 1.00 0.000 324 300 0.001910 0.001805 N3 3 2 2511 1.00 0.000 pdxK b2418 pyridoxal/pyridoxine/pyridoxamine kinase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" b2419 7537 7238 1.04 0.018 7636 7985 -1.05 -0.019 7387 7810 0.043590 0.047023 A14 2 3 3601 -1.08 -0.033 yfeK b2419 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2420 835 944 -1.13 -0.053 686 760 -1.11 -0.045 889 723 0.005246 0.004353 C14 2 3 3602 1.21 0.081 b2420 b2420 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2421 1901 1761 1.08 0.033 2362 3159 -1.34 -0.126 1831 2761 0.010803 0.016621 A23 4 2 1913 -1.54 -0.187 cysM b2421 "cysteine synthase B, O-acetylserine sulfhydrolase B" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Cysteine b2422 1059 929 1.14 0.057 121 230 -1.00 0.000 994 175 0.005865 0.001055 B3 1 1 777 1.96 0.291 cysA b2422 ATP-binding component of sulfate permease A protein; chromate resistance Transport and binding proteins transport; Transport of small molecules: Anions b2423 13336 13146 1.01 0.006 3574 4046 -1.13 -0.054 13241 3810 0.078129 0.022937 D3 1 1 778 3.41 0.532 cysW b2423 sulfate transport system permease W protein Transport and binding proteins transport; Transport of small molecules: Anions b2424 4034 4399 -1.09 -0.038 5845 6095 -1.04 -0.018 4216 5970 0.024879 0.035945 F3 1 1 779 -1.44 -0.160 cysU b2424 "sulfate, thiosulfate transport system permease T protein" Transport and binding proteins transport; Transport of small molecules: Anions b2425 2103 2162 -1.03 -0.012 979 1000 -1.02 -0.009 2132 989 0.012583 0.005957 H3 1 1 780 2.11 0.325 cysP b2425 thiosulfate binding protein Transport and binding proteins transport; Transport of small molecules: Anions b2426 802 630 1.27 0.105 823 731 1.13 0.052 716 777 0.004227 0.004676 P3 3 2 2512 -1.11 -0.044 ucpA b2426 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2427 1359 1334 1.02 0.008 3303 3788 -1.15 -0.059 1346 3546 0.007944 0.021348 E14 2 3 3603 -2.69 -0.429 yfeT b2427 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2428 390 279 1.00 0.000 364 328 1.00 0.000 334 346 0.001972 0.002085 K13 3 1 246 -1.00 0.000 yfeU b2428 putative regulator Putative regulatory proteins putative regulator; Not classified b2429 3761 2961 1.27 0.104 2793 2356 1.19 0.074 3361 2575 0.019832 0.015500 B5 3 2 2513 1.28 0.107 b2429 b2429 putative PTS enzyme II Putative enzymes putative enzyme; Not classified b2430 1164 1223 -1.05 -0.021 1454 1348 1.08 0.033 1194 1401 0.007043 0.008436 E21 4 1 371 -1.20 -0.078 b2430 b2430 putative beta-lactamase Putative enzymes putative enzyme; Not classified b2431 685 1311 -1.91 -0.282 1121 1431 -1.28 -0.106 998 1276 0.005890 0.007682 G14 2 3 3604 -1.30 -0.115 b2431 b2431 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2432 481 342 1.00 0.000 292 558 -1.12 -0.048 412 425 0.002429 0.002561 I14 2 3 3605 -1.00 0.000 b2432 b2432 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2433 1024 966 1.06 0.025 842 1238 -1.47 -0.167 995 1040 0.005869 0.006261 K14 2 3 3606 -1.07 -0.028 b2433 b2433 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2434 445 887 -1.77 -0.249 417 421 -1.00 0.000 666 419 0.003931 0.002523 M14 2 3 3607 1.31 0.117 b2434 b2434 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2435 58 268 -1.00 0.000 215 247 -1.00 0.000 163 231 0.000961 0.001392 O6 2 1 504 -1.00 0.000 amiA b2435 N-acetylmuramoyl-l-alanine amidase I Cell structure "enzyme; Murein sacculus, peptidoglycan" b2436 1337 993 1.35 0.129 861 800 1.08 0.032 1165 831 0.006874 0.005002 L9 1 2 2342 1.37 0.138 hemF b2436 coproporphyrinogen III oxidase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b2437 15883 17596 -1.11 -0.044 16447 17529 -1.07 -0.028 16739 16988 0.098775 0.102275 O14 2 3 3608 -1.04 -0.015 yfeG b2437 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b2438 51 80 -1.00 0.000 50 -75 1.00 0.000 65 -12 0.000384 -0.000075 G10 3 1 612 1.00 0.000 b2438 b2438 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2439 1562 1561 1.00 0.000 797 1029 -1.29 -0.111 1561 913 0.009214 0.005498 A16 2 3 3609 1.68 0.224 b2439 b2439 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2440 1693 1769 -1.05 -0.019 1324 1446 -1.09 -0.038 1731 1385 0.010214 0.008338 G13 1 1 52 1.22 0.088 eutC b2440 "ethanolamine ammonia-lyase, light chain" Central intermediary metabolism enzyme; Degradation of small molecules: Amines b2441 1474 1543 -1.05 -0.020 887 895 -1.01 -0.004 1509 891 0.008902 0.005365 I13 1 1 53 1.66 0.220 eutB b2441 "ethanolamine ammonia-lyase, heavy chain" Central intermediary metabolism enzyme; Degradation of small molecules: Amines b2442 1020 1560 -1.53 -0.185 1139 1460 -1.28 -0.108 1290 1300 0.007613 0.007825 G21 4 1 372 -1.03 -0.012 b2442 b2442 putative prophage integrase "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b2443 500 339 1.00 0.000 201 259 -1.00 0.000 419 230 0.002473 0.001384 C16 2 3 3610 1.00 0.000 b2443 b2443 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2444 99 194 -1.00 0.000 81 211 -1.00 0.000 147 146 0.000866 0.000878 E16 2 3 3611 -1.00 0.000 b2444 b2444 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2445 -77 21 -1.00 0.000 -255 -36 -1.00 0.000 -28 -145 -0.000165 -0.000876 G16 2 3 3612 1.00 0.000 b2445 b2445 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2446 792 627 1.26 0.101 48 380 -1.00 0.000 710 214 0.004187 0.001291 I16 2 3 3613 1.40 0.145 b2446 b2446 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2447 10957 11166 -1.02 -0.008 11767 13849 -1.18 -0.071 11061 12808 0.065270 0.077114 K16 2 3 3614 -1.18 -0.072 b2447 b2447 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2448 582 644 -1.11 -0.044 245 200 1.00 0.000 613 223 0.003619 0.001341 M16 2 3 3615 1.21 0.081 b2448 b2448 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2449 2029 1829 1.11 0.045 727 1197 -1.65 -0.217 1929 962 0.011383 0.005790 O16 2 3 3616 1.97 0.294 b2449 b2449 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2450 1882 2716 -1.44 -0.159 1648 1950 -1.18 -0.073 2299 1799 0.013564 0.010831 A18 2 3 3617 1.25 0.098 b2450 b2450 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2451 2899 3982 -1.37 -0.138 2819 3279 -1.16 -0.066 3441 3049 0.020301 0.018357 C18 2 3 3618 1.11 0.044 b2451 b2451 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2452 2655 2147 1.24 0.092 1912 1895 1.01 0.004 2401 1903 0.014168 0.011459 K13 1 1 54 1.24 0.092 eutH b2452 ethanolamine utilization; homolog of Salmonella putative transport protein Putative transport proteins putative transport; Degradation of small molecules: Amines b2453 968 858 1.13 0.053 651 458 1.30 0.115 913 555 0.005386 0.003340 M13 1 1 55 1.61 0.207 eutG b2453 "ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase" Carbon compound catabolism putative enzyme; Degradation of small molecules: Amines b2454 5204 3730 1.40 0.145 2347 2098 1.12 0.049 4467 2222 0.026357 0.013381 O13 1 1 56 1.97 0.294 eutJ b2454 ethanolamine utilization; homolog of Salmonella gene Carbon compound catabolism putative enzyme; Degradation of small molecules: Amines b2455 3579 3304 1.08 0.035 2724 2633 1.03 0.015 3441 2678 0.020306 0.016125 A15 1 1 57 1.26 0.100 eutE b2455 ethanolamine utilization; similar to acetaldehyde dehydrogenase Carbon compound catabolism putative enzyme; Degradation of small molecules: Amines b2456 238 220 1.00 0.000 38 266 -1.00 0.000 229 152 0.001352 0.000916 E18 2 3 3619 1.00 0.000 cchB b2456 detox protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2457 4046 3614 1.12 0.049 2686 2290 1.17 0.069 3830 2488 0.022598 0.014979 G18 2 3 3620 1.51 0.179 cchA b2457 detox protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2458 1088 690 1.58 0.198 651 550 1.18 0.073 889 601 0.005247 0.003616 C15 1 1 58 1.45 0.162 eutI b2458 ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase Carbon compound catabolism putative enzyme; Degradation of small molecules: Amines b2459 21731 18422 1.18 0.072 20674 21338 -1.03 -0.014 20077 21006 0.118466 0.126467 I18 2 3 3621 -1.07 -0.028 b2459 b2459 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2460 4888 3877 1.26 0.101 4711 4658 1.01 0.005 4383 4684 0.025862 0.028203 K18 2 3 3622 -1.09 -0.038 b2460 b2460 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2461 1784 1915 -1.07 -0.031 936 1019 -1.09 -0.037 1849 977 0.010912 0.005883 M18 2 3 3623 1.85 0.268 b2461 b2461 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2462 2844 3161 -1.11 -0.046 1644 1363 1.21 0.081 3002 1504 0.017715 0.009054 O18 2 3 3624 1.96 0.292 b2462 b2462 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2463 3562 4433 -1.24 -0.095 3050 2989 1.02 0.009 3998 3019 0.023589 0.018178 I18 3 2 2181 1.30 0.113 b2463 b2463 putative multimodular enzyme Putative enzymes putative enzyme; Not classified b2464 1892 1451 1.30 0.115 615 577 1.07 0.028 1671 596 0.009863 0.003587 K18 3 2 2182 2.75 0.439 talA b2464 transaldolase A Central intermediary metabolism "enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b2465 5726 6074 -1.06 -0.026 3518 3379 1.04 0.018 5900 3449 0.034814 0.020762 N12 3 1 1391 1.68 0.224 tktB b2465 transketolase 2 isozyme Central intermediary metabolism "enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b2466 4214 5033 -1.19 -0.077 3617 4290 -1.19 -0.074 4624 3953 0.027282 0.023801 A20 2 3 3625 1.15 0.059 b2466 b2466 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2467 623 941 -1.51 -0.179 410 535 -1.07 -0.029 782 472 0.004615 0.002844 C20 2 3 3626 1.54 0.187 yffH b2467 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2468 1492 1835 -1.23 -0.090 1238 1366 -1.10 -0.043 1663 1302 0.009815 0.007838 C23 4 2 1914 1.25 0.098 yffG b2468 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b2469 6451 6352 1.02 0.007 3542 4117 -1.16 -0.065 6402 3830 0.037773 0.023057 P12 3 1 1392 1.64 0.214 narQ b2469 "sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL)" Regulatory function "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2470 4978 4942 1.01 0.003 4466 4846 -1.09 -0.035 4960 4656 0.029266 0.028032 B12 1 1 1193 1.04 0.019 acrD b2470 "sensitivity to acriflavine, integral membrane protein, possible efflux pump" Putative transport proteins putative transport; Drug/analog sensitivity b2471 152 353 -1.00 0.000 576 558 1.03 0.013 253 567 0.001491 0.003412 E20 2 3 3627 -1.14 -0.056 yffB b2471 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2472 1181 1431 -1.21 -0.084 1054 1306 -1.24 -0.093 1306 1180 0.007705 0.007103 E23 4 2 1915 1.08 0.035 dapE b2472 N-succinyl-diaminopimelate deacylase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b2473 570 561 1.02 0.007 444 803 -1.61 -0.206 566 624 0.003339 0.003755 G20 2 3 3628 -1.12 -0.051 ypfH b2473 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2474 3915 4062 -1.04 -0.016 3728 3940 -1.06 -0.024 3988 3834 0.023534 0.023083 I20 2 3 3629 1.02 0.008 ypfI b2474 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2475 5051 4721 1.07 0.029 2903 2953 -1.02 -0.007 4886 2928 0.028829 0.017626 K20 2 3 3630 1.64 0.214 b2475 b2475 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2476 30560 31988 -1.05 -0.020 27517 23409 1.18 0.070 31274 25463 0.184539 0.153302 M24 1 2 2015 1.20 0.081 purC b2476 phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2477 2443 1751 1.39 0.145 1591 1141 1.39 0.144 2097 1366 0.012374 0.008222 C4 3 1 586 1.50 0.178 nlpB b2477 lipoprotein-34 Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b2478 2517 2612 -1.04 -0.016 2429 2331 1.04 0.018 2564 2380 0.015130 0.014327 G23 4 2 1916 1.06 0.024 dapA b2478 dihydrodipicolinate synthase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b2479 1806 1174 1.54 0.187 623 718 -1.15 -0.061 1490 670 0.008793 0.004036 M18 3 2 2183 2.18 0.338 gcvR b2479 transcriptional regulation of gcv operon Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b2480 11782 11618 1.01 0.006 6610 7198 -1.09 -0.037 11700 6904 0.069040 0.041568 J3 1 1 781 1.66 0.220 bcp b2480 bacterioferritin comigratory protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2481 500 407 1.00 0.000 340 80 1.00 0.000 454 210 0.002676 0.001263 B14 3 1 1393 1.00 0.000 hyfA b2481 hydrogenase 4 Fe-S subunit Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b2482 6884 9916 -1.44 -0.158 3059 3281 -1.07 -0.030 8400 3170 0.049567 0.019084 D14 3 1 1394 2.60 0.415 hyfB b2482 hydrogenase 4 membrane subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2483 541 -124 1.08 0.034 428 156 1.00 0.000 208 292 0.001229 0.001759 F14 3 1 1395 -1.00 0.000 hyfC b2483 hydrogenase 4 membrane subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2484 4190 2650 1.58 0.199 3389 2256 1.50 0.177 3420 2823 0.020178 0.016994 O18 3 2 2184 1.19 0.075 hyfD b2484 hydrogenase 4 membrane subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2485 4750 4479 1.06 0.026 5545 5956 -1.07 -0.031 4615 5751 0.027229 0.034622 M20 2 3 3631 -1.27 -0.104 hyfE b2485 hydrogenase 4 membrane subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2486 920 270 1.84 0.265 587 299 1.17 0.070 595 443 0.003510 0.002666 H14 3 1 1396 1.17 0.068 hyfF b2486 hydrogenase 4 membrane subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2487 1799 1474 1.22 0.087 1707 1476 1.16 0.063 1636 1591 0.009656 0.009581 J14 3 1 1397 1.01 0.003 hyfG b2487 hydrogenase 4 subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2488 8364 7728 1.08 0.034 3507 3824 -1.09 -0.038 8046 3665 0.047477 0.022068 L14 3 1 1398 2.15 0.333 hyfH b2488 hydrogenase 4 Fe-S subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2489 5498 5527 -1.01 -0.002 3475 3775 -1.09 -0.036 5512 3625 0.032527 0.021827 N14 3 1 1399 1.49 0.173 hyfI b2489 hydrogenase 4 Fe-S subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2490 629 582 1.08 0.034 1106 1001 1.11 0.043 606 1054 0.003575 0.006343 O1 3 2 1736 -1.77 -0.249 b2490 b2490 putative protein processing element Putative factors putative factor; Not classified b2491 3397 2751 1.23 0.092 3930 3984 -1.01 -0.006 3074 3957 0.018138 0.023825 A20 3 2 2185 -1.31 -0.118 hyfR b2491 "putative 2-component regulator, interaction with sigma 54" Putative regulatory proteins putative regulator; Not classified b2492 649 515 1.26 0.101 455 290 1.00 0.000 582 373 0.003433 0.002244 D9 3 1 994 1.14 0.059 focB b2492 probable formate transporter (formate channel 2) Putative transport proteins "putative transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2493 6744 6315 1.07 0.029 6851 7818 -1.14 -0.057 6530 7334 0.038530 0.044157 O20 2 3 3632 -1.15 -0.059 perM b2493 putative permease Putative transport proteins putative transport; Not classified b2494 4410 4567 -1.04 -0.015 2281 2531 -1.11 -0.045 4488 2406 0.026485 0.014487 A22 2 3 3633 1.83 0.262 b2494 b2494 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2495 9656 7712 1.25 0.098 4497 4584 -1.02 -0.008 8684 4541 0.051240 0.027339 D5 3 2 2514 1.87 0.273 b2495 b2495 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2496 767 716 1.07 0.030 644 573 1.12 0.051 741 608 0.004374 0.003662 K5 1 2 1558 1.19 0.077 b2496 b2496 putative DNA replication factor Putative factors putative factor; Not classified b2497 2207 2106 1.05 0.020 1613 1635 -1.01 -0.006 2157 1624 0.012725 0.009779 L3 1 1 782 1.30 0.114 uraA b2497 uracil transport Transport and binding proteins "transport; Transport of small molecules: Nucleosides, purines, pyrimidines" b2498 3870 3494 1.11 0.044 16678 15294 1.09 0.038 3682 15986 0.021724 0.096245 O24 1 2 2016 -4.43 -0.646 upp b2498 uracil phosphoribosyltransferase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b2499 8657 7267 1.19 0.076 7129 7768 -1.09 -0.037 7962 7449 0.046980 0.044847 A2 2 2 2017 1.05 0.020 purM b2499 phosphoribosylaminoimidazole synthetase = AIR synthetase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2500 379 931 -1.86 -0.270 735 1042 -1.42 -0.152 655 889 0.003866 0.005352 C2 2 2 2018 -1.38 -0.141 purN b2500 phosphoribosylglycinamide formyltransferase 1 Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2501 1521 1331 1.14 0.058 1528 829 1.84 0.266 1426 1179 0.008414 0.007098 C20 3 2 2186 1.19 0.074 ppk b2501 polyphosphate kinase Central intermediary metabolism enzyme; Central intermediary metabolism: Phosphorus compounds b2502 1665 835 2.00 0.300 1576 847 1.86 0.270 1250 1212 0.007375 0.007294 E20 3 2 2187 1.01 0.005 ppx b2502 exopolyphosphatase Central intermediary metabolism enzyme; Central intermediary metabolism: Phosphorus compounds b2503 10838 8898 1.22 0.086 8118 8342 -1.03 -0.012 9868 8230 0.058228 0.049549 C22 2 3 3634 1.18 0.070 b2503 b2503 putative cytochrome C-type biogenesis protein Putative enzymes putative enzyme; Not classified b2504 532 781 -1.47 -0.167 1034 968 1.07 0.029 656 1001 0.003872 0.006027 E22 2 3 3635 -1.56 -0.192 b2504 b2504 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2505 -28 335 -1.00 0.000 67 277 -1.00 0.000 154 172 0.000906 0.001036 A8 2 1 505 -1.00 0.000 b2505 b2505 putative outer membrane lipoprotein putative membrane protein putative membrane; Not classified b2506 498 455 1.00 0.000 202 117 1.00 0.000 477 159 0.002813 0.000959 I10 3 1 613 1.00 0.000 b2506 b2506 putative membrane protein putative membrane protein putative membrane; Not classified b2507 8665 9964 -1.15 -0.061 9482 9643 -1.02 -0.007 9315 9562 0.054964 0.057571 E2 2 2 2019 -1.05 -0.020 guaA b2507 GMP synthetase (glutamine-hydrolyzing) Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2508 1629 2189 -1.34 -0.128 3019 3377 -1.12 -0.049 1909 3198 0.011265 0.019253 G2 2 2 2020 -1.71 -0.233 guaB b2508 IMP dehydrogenase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2509 393 681 -1.36 -0.134 375 726 -1.45 -0.162 537 551 0.003170 0.003315 K1 2 2 1638 -1.05 -0.019 xseA b2509 "exonuclease VII, large subunit" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2510 272 349 -1.00 0.000 340 277 1.00 0.000 311 308 0.001835 0.001856 G22 2 3 3636 -1.00 0.000 b2510 b2510 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2511 3358 2795 1.20 0.080 3247 3210 1.01 0.005 3077 3228 0.018154 0.019437 F5 3 2 2515 -1.07 -0.030 b2511 b2511 putative GTP-binding factor Putative factors putative factor; Not classified b2512 1237 1384 -1.12 -0.049 1407 1680 -1.19 -0.077 1311 1544 0.007734 0.009294 H5 3 2 2516 -1.20 -0.080 b2512 b2512 putative dehydrogenase Putative enzymes putative enzyme; Not classified b2513 1088 1060 1.03 0.011 1220 1279 -1.05 -0.020 1074 1250 0.006337 0.007524 I22 2 3 3637 -1.19 -0.075 b2513 b2513 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2514 5036 3846 1.31 0.117 3855 3651 1.06 0.024 4441 3753 0.026207 0.022595 A3 3 2 1737 1.16 0.064 hisS b2514 histidine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b2515 2370 3147 -1.33 -0.123 2165 2432 -1.12 -0.051 2758 2299 0.016275 0.013839 K22 2 3 3638 1.18 0.070 gcpE b2515 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2516 2124 2881 -1.36 -0.132 444 1288 -2.58 -0.411 2502 866 0.014765 0.005214 C8 2 1 506 2.83 0.452 yfgA b2516 putative membrane protein putative membrane protein putative membrane; Not classified b2517 1399 628 2.23 0.348 1998 1721 1.16 0.065 1013 1860 0.005979 0.011197 J5 3 2 2517 -1.87 -0.272 yfgB b2517 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2518 847 1147 -1.35 -0.131 3028 2930 1.03 0.014 997 2979 0.005884 0.017933 I2 2 2 2021 -3.05 -0.484 ndk b2518 nucleoside diphosphate kinase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2519 1470 1738 -1.18 -0.073 1201 1489 -1.24 -0.093 1604 1345 0.009467 0.008099 E8 2 1 507 1.17 0.068 pbpC b2519 putative peptidoglycan enzyme Putative enzymes putative enzyme; Not classified b2520 387 523 -1.05 -0.020 298 260 1.00 0.000 455 279 0.002684 0.001679 M22 2 3 3639 1.00 0.000 b2520 b2520 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2521 1164 833 1.40 0.145 1068 940 1.14 0.055 998 1004 0.005891 0.006044 G20 3 2 2188 -1.03 -0.011 sseA b2521 putative thiosulfate sulfurtransferase Putative enzymes putative enzyme; Not classified b2522 5420 4661 1.16 0.065 3484 3048 1.14 0.058 5040 3266 0.029741 0.019664 H13 4 2 2644 1.51 0.180 sseB b2522 enhanced serine sensitivity Putative factors phenotype; Not classified b2523 643 410 1.29 0.109 803 423 1.61 0.206 526 613 0.003107 0.003690 I20 3 2 2189 -1.19 -0.075 pepB b2523 putative peptidase Putative enzymes putative enzyme; Not classified b2524 12875 10750 1.20 0.078 17117 17404 -1.02 -0.007 11813 17261 0.069704 0.103919 O22 2 3 3640 -1.49 -0.173 yfhJ b2524 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2525 5021 5160 -1.03 -0.012 4372 4661 -1.07 -0.028 5090 4516 0.030035 0.027190 P14 3 1 1400 1.10 0.043 fdx b2525 "[2FE-2S] ferredoxin, electron carrer protein" Energy metabolism "carrier; Energy metabolism, carbon: Electron transport" b2526 11270 9516 1.18 0.073 6050 6064 -1.00 -0.001 10393 6057 0.061327 0.036466 D12 1 1 1194 1.68 0.226 hscA b2526 "heat shock protein, chaperone, member of Hsp70 protein family" Cell processes factor; Chaperones b2527 709 602 1.18 0.071 993 938 1.06 0.025 655 966 0.003866 0.005813 L10 2 3 3641 -1.50 -0.177 yfhE b2527 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2528 2195 2146 1.02 0.010 2080 1903 1.09 0.039 2171 1991 0.012808 0.011988 C24 2 3 3642 1.07 0.029 yfhF b2528 putative regulator Putative regulatory proteins putative regulator; Not classified b2529 3589 921 3.90 0.591 2136 2321 -1.09 -0.036 2255 2228 0.013307 0.013415 E24 2 3 3643 -1.01 -0.004 b2529 b2529 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2530 3007 2286 1.32 0.119 2311 2435 -1.05 -0.023 2647 2373 0.015617 0.014289 K20 3 2 2190 1.09 0.039 yfhO b2530 putative aminotransferase Putative enzymes putative enzyme; Not classified b2531 1787 1373 1.30 0.115 796 1243 -1.56 -0.194 1580 1019 0.009322 0.006137 G24 2 3 3644 1.52 0.182 b2531 b2531 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2532 650 235 1.30 0.114 803 668 1.20 0.080 442 735 0.002610 0.004426 L5 3 2 2518 -1.48 -0.169 b2532 b2532 putative ATP synthase beta subunit Putative enzymes putative enzyme; Not classified b2533 207 271 -1.00 0.000 981 1228 -1.25 -0.097 239 1105 0.001411 0.006650 C13 2 1 146 -2.22 -0.346 suhB b2533 "enhances synthesis of sigma32 in mutant; extragenic suppressor, may modulate RNAse III lethal action" Cell processes phenotype; Global regulatory functions b2534 555 519 1.07 0.029 576 295 1.15 0.062 537 436 0.003167 0.002623 N5 3 2 2519 1.06 0.024 b2534 b2534 putative enzyme (3.4.-) Putative enzymes putative enzyme; Not classified b2535 1834 2154 -1.17 -0.070 2053 2826 -1.38 -0.139 1994 2440 0.011767 0.014688 I24 2 3 3645 -1.25 -0.096 csiE b2535 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2536 514 580 -1.13 -0.053 871 557 1.56 0.194 547 714 0.003229 0.004300 M20 3 2 2191 -1.33 -0.124 hcaT b2536 MFS (major facilitator superfamily) transporter Transport and binding proteins transport; Degradation of small molecules: Carbon compounds b2537 763 685 1.11 0.047 550 350 1.10 0.041 724 450 0.004272 0.002709 M13 3 1 247 1.42 0.153 hcaR b2537 transcriptional activator of hca cluster Regulatory function regulator; Degradation of small molecules: Carbon compounds b2538 1511 1352 1.12 0.048 1167 872 1.34 0.126 1432 1019 0.008447 0.006136 O20 3 2 2192 1.38 0.139 hcaA1 b2538 large terminal subunit of phenylpropionate dioxygenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2539 1527 1225 1.25 0.096 1300 565 2.30 0.362 1376 932 0.008118 0.005612 A22 3 2 2193 1.45 0.160 hcaA2 b2539 small terminal subunit of phenylpropionate dioxygenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2540 980 474 1.96 0.292 461 360 1.00 0.000 727 410 0.004289 0.002471 C22 3 2 2194 1.43 0.155 hcaC b2540 ferredoxin subunit of phenylpropionate dioxygenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2541 1557 1298 1.20 0.079 1544 1379 1.12 0.049 1427 1461 0.008423 0.008797 P5 3 2 2520 -1.04 -0.019 hcaB b2541 "2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2542 788 693 1.14 0.056 644 571 1.13 0.052 740 607 0.004369 0.003656 B7 3 2 2521 1.20 0.077 hcaD b2542 ferredoxin reductase subunit of phenylpropionate dioxygenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2543 321 551 -1.10 -0.042 78 236 -1.00 0.000 436 157 0.002570 0.000945 K24 2 3 3646 1.00 0.000 yphA b2543 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2544 1994 2135 -1.07 -0.030 1750 1796 -1.03 -0.011 2065 1773 0.012183 0.010674 M24 2 3 3647 1.14 0.057 yphB b2544 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2545 801 618 1.30 0.112 584 654 -1.12 -0.049 709 619 0.004186 0.003727 D7 3 2 2522 1.12 0.050 yphC b2545 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2546 1500 1191 1.26 0.100 803 733 1.10 0.040 1345 768 0.007939 0.004622 F9 3 1 995 1.72 0.235 yphD b2546 putative transport system permease protein Putative transport proteins putative transport; Not classified b2547 884 702 1.26 0.100 688 432 1.38 0.139 793 560 0.004681 0.003370 H9 3 1 996 1.39 0.143 yphE b2547 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b2548 1980 1750 1.13 0.054 1859 1893 -1.02 -0.008 1865 1876 0.011004 0.011295 O24 2 3 3648 -1.03 -0.011 yphF b2548 putative LACI-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2549 15685 15228 1.03 0.013 12240 12312 -1.01 -0.003 15457 12276 0.091206 0.073909 A2 3 3 3649 1.23 0.091 yphG b2549 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2550 4030 3523 1.14 0.058 2662 2217 1.20 0.079 3776 2440 0.022284 0.014689 E15 1 1 59 1.52 0.181 yphH b2550 putative NAGC-like transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2551 14510 14641 -1.01 -0.004 3705 4518 -1.22 -0.086 14575 4111 0.086004 0.024753 I23 4 2 1917 3.47 0.541 glyA b2551 serine hydroxymethyltransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Glycine b2552 2334 1991 1.17 0.069 2305 2213 1.04 0.018 2162 2259 0.012759 0.013601 B16 3 1 1401 -1.07 -0.028 hmpA b2552 "dihydropteridine reductase, ferrisiderophore reductase activity" Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b2553 14843 14719 1.01 0.004 7135 7984 -1.12 -0.049 14781 7559 0.087218 0.045511 K23 4 2 1918 1.92 0.282 glnB b2553 regulatory protein P-II for glutamine synthetase Regulatory function regulator; Amino acid biosynthesis: Glutamine b2554 1258 1003 1.25 0.098 867 940 -1.08 -0.035 1131 904 0.006672 0.005440 E22 3 2 2195 1.23 0.089 yfhA b2554 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2555 1475 1558 -1.06 -0.024 1673 1761 -1.05 -0.022 1516 1717 0.008947 0.010336 K10 3 1 614 -1.16 -0.063 yfhG b2555 putative alpha helix protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2556 1509 1274 1.18 0.074 1075 1208 -1.12 -0.051 1392 1142 0.008212 0.006875 O13 3 1 248 1.19 0.077 yfhK b2556 putative 2-component sensor protein Putative regulatory proteins putative regulator; Not classified b2557 18885 17617 1.07 0.030 15420 17890 -1.16 -0.065 18251 16655 0.107693 0.100271 K2 2 2 2022 1.07 0.031 purL b2557 phosphoribosylformyl-glycineamide synthetase = FGAM synthetase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b2558 512 297 1.02 0.011 579 623 -1.08 -0.032 404 601 0.002386 0.003620 F7 3 2 2523 -1.21 -0.082 yfhD b2558 putative periplasmic binding transport protein Putative transport proteins putative transport; Not classified b2559 597 389 1.19 0.077 850 421 1.70 0.230 493 635 0.002909 0.003825 H7 3 2 2524 -1.27 -0.106 yfhC b2559 putative deaminase Putative enzymes putative enzyme; Not classified b2560 1707 1720 -1.01 -0.003 1458 1181 1.23 0.092 1713 1319 0.010109 0.007942 C2 3 3 3650 1.27 0.105 yfhB b2560 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2561 2213 2309 -1.04 -0.018 1305 1769 -1.36 -0.132 2261 1537 0.013343 0.009255 E2 3 3 3651 1.44 0.159 yfhH b2561 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2562 6084 6266 -1.03 -0.013 7205 7358 -1.02 -0.009 6175 7281 0.036438 0.043837 G2 3 3 3652 -1.20 -0.080 yfhL b2562 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2563 1131 1219 -1.08 -0.032 1418 1833 -1.29 -0.112 1175 1625 0.006932 0.009786 G14 2 2 2068 -1.41 -0.150 acpS b2563 CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b2564 1985 1896 1.05 0.020 1499 1460 1.03 0.012 1940 1480 0.011450 0.008908 N9 1 2 2343 1.29 0.109 pdxJ b2564 pyridoxine biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" b2565 1010 775 1.30 0.115 699 516 1.35 0.131 893 607 0.005269 0.003657 M5 1 2 1559 1.44 0.159 recO b2565 protein interacts with RecR and possibly RecF proteins Regulatory function "regulator; DNA - replication, repair, restriction/modification" b2566 746 821 -1.10 -0.042 1488 1376 1.08 0.034 783 1432 0.004622 0.008622 E13 2 1 147 -1.87 -0.271 era b2566 GTP-binding protein Regulatory function factor; Global regulatory functions b2567 1092 793 1.38 0.139 788 870 -1.11 -0.043 943 829 0.005562 0.004991 O5 1 2 1560 1.11 0.047 rnc b2567 "RNase III, ds RNA" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b2568 2807 2690 1.04 0.018 1622 1773 -1.09 -0.039 2749 1698 0.016218 0.010220 N3 1 1 783 1.59 0.201 lepB b2568 leader peptidase (signal peptidase I) Cell processes "enzyme; Protein, peptide secretion" b2569 5868 4977 1.18 0.071 6299 6808 -1.08 -0.034 5422 6553 0.031995 0.039455 C3 3 2 1738 -1.23 -0.091 lepA b2569 "GTP-binding elongation factor, may be inner membrane protein" "Translation, post-translational modification" factor; Proteins - translation and modification b2570 -79 102 -1.00 0.000 -91 12 -1.00 0.000 11 -40 0.000067 -0.000239 G13 2 1 148 1.00 0.000 rseC b2570 "sigma-E factor, negative regulatory protein" Regulatory function regulator; Global regulatory functions b2571 -135 -3 -1.00 0.000 -99 -68 -1.00 0.000 -69 -83 -0.000407 -0.000502 I13 2 1 149 1.00 0.000 rseB b2571 regulates activity of sigma-E factor Regulatory function regulator; Global regulatory functions b2572 3589 3870 -1.08 -0.033 960 1156 -1.20 -0.081 3729 1058 0.022005 0.006369 K13 2 1 150 3.46 0.538 rseA b2572 "sigma-E factor, negative regulatory protein" Regulatory function regulator; Global regulatory functions b2573 1089 1614 -1.48 -0.171 89 396 -1.00 0.000 1352 243 0.007976 0.001462 M13 2 1 151 2.66 0.425 rpoE b2573 "RNA polymerase, sigma-E factor; heat shock and oxidative stress" Regulatory function regulator; Global regulatory functions b2574 962 939 1.02 0.011 810 781 1.04 0.016 950 796 0.005608 0.004790 P9 1 2 2344 1.17 0.068 nadB b2574 "quinolinate synthetase, B protein" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" b2575 2600 1591 1.63 0.213 2442 2406 1.01 0.006 2095 2424 0.012364 0.014594 I2 3 3 3653 -1.18 -0.072 yfiC b2575 putative enzyme Putative enzymes putative enzyme; Not classified b2576 11588 12397 -1.07 -0.029 10745 10397 1.03 0.014 11992 10571 0.070763 0.063645 M1 2 2 1639 1.11 0.046 srmB b2576 ATP-dependent RNA helicase "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b2577 1076 435 2.15 0.333 391 269 1.00 0.000 755 330 0.004457 0.001988 A15 3 1 249 1.49 0.172 yfiE b2577 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b2578 239 115 1.00 0.000 163 15 1.00 0.000 177 89 0.001045 0.000537 K2 3 3 3654 1.00 0.000 yfiK b2578 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2579 907 935 -1.03 -0.013 511 610 -1.20 -0.077 921 561 0.005435 0.003375 D16 3 1 1402 1.61 0.207 yfiD b2579 putative formate acetyltransferase Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b2580 1087 1112 -1.02 -0.010 480 449 1.00 0.000 1099 464 0.006487 0.002794 A7 1 2 1561 2.16 0.335 ung b2580 uracil-DNA-glycosylase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2581 1770 1814 -1.02 -0.011 2393 2100 1.14 0.057 1792 2247 0.010576 0.013527 M2 3 3 3655 -1.28 -0.107 yfiF b2581 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2582 3863 3627 1.06 0.027 2604 2185 1.19 0.076 3745 2395 0.022099 0.014418 F16 3 1 1403 1.53 0.185 trxC b2582 putative thioredoxin-like protein Putative enzymes putative enzyme; Not classified b2583 755 781 -1.03 -0.015 546 794 -1.46 -0.163 768 670 0.004532 0.004032 O2 3 3 3656 1.12 0.051 yfiP b2583 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2584 16273 14053 1.16 0.064 19825 19521 1.02 0.007 15163 19673 0.089474 0.118441 A4 3 3 3657 -1.32 -0.122 yfiQ b2584 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2585 973 1463 -1.50 -0.177 2351 2751 -1.17 -0.068 1218 2551 0.007189 0.015359 I14 2 2 2069 -2.14 -0.330 pssA b2585 phosphatidylserine synthase; phospholipid synthesis Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b2586 3451 3561 -1.03 -0.014 3152 3477 -1.10 -0.043 3506 3314 0.020688 0.019955 C4 3 3 3658 1.04 0.016 yfiM b2586 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2587 20547 19128 1.07 0.031 7343 7631 -1.04 -0.017 19838 7487 0.117057 0.045075 P3 1 1 784 2.60 0.414 kgtP b2587 alpha-ketoglutarate permease Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2592 10448 9597 1.09 0.037 17669 17096 1.03 0.014 10022 17382 0.059139 0.104651 E3 3 2 1739 -1.77 -0.248 clpB b2592 heat shock protein Cell processes "putative enzyme; Degradation of proteins, peptides, glyco" b2593 1246 822 1.52 0.181 892 1025 -1.15 -0.060 1034 958 0.006100 0.005769 E4 3 3 3659 1.06 0.024 yfiH b2593 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2594 1949 874 2.23 0.348 1573 1224 1.29 0.109 1412 1399 0.008330 0.008421 J7 3 2 2525 -1.01 -0.005 sfhB b2594 suppressor of ftsH mutation Cell processes phenotype; Not classified b2595 5826 3685 1.58 0.199 4510 4678 -1.04 -0.016 4755 4594 0.028059 0.027658 G4 3 3 3660 1.01 0.006 b2595 b2595 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2596 93 62 1.00 0.000 48 -3 1.00 0.000 78 23 0.000458 0.000136 I4 3 3 3661 1.00 0.000 b2596 b2596 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2597 4010 3901 1.03 0.012 1823 1575 1.16 0.063 3956 1699 0.023342 0.010228 O1 2 2 1640 2.28 0.358 yfiA b2597 putative yhbH sigma 54 modulator Putative regulatory proteins putative regulator; Not classified b2598 78 119 -1.00 0.000 -15 98 -1.00 0.000 98 42 0.000580 0.000251 M23 4 2 1919 1.00 0.000 pheL b2598 leader peptide of chorismate mutase-P-prephenate dehydratase Amino acid biosynthesis leader; Amino acid biosynthesis: Phenylalanine b2599 3611 3910 -1.08 -0.035 1230 1450 -1.18 -0.071 3760 1340 0.022189 0.008066 O23 4 2 1920 2.75 0.439 pheA b2599 chorismate mutase-P and prephenate dehydratase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Phenylalanine b2600 9935 8584 1.16 0.063 1065 1047 1.02 0.007 9260 1056 0.054638 0.006358 A2 1 2 1921 8.59 0.934 tyrA b2600 chorismate mutase-T and prephenate dehydrogenase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tyrosine b2601 11655 10336 1.13 0.052 1741 1322 1.32 0.119 10996 1531 0.064883 0.009220 C2 1 2 1922 7.04 0.847 aroF b2601 "3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible)" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tyrosine b2602 253 528 -1.06 -0.023 10 162 -1.00 0.000 391 86 0.002305 0.000517 K4 3 3 3662 1.00 0.000 yfiL b2602 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2603 523 467 1.05 0.019 486 366 1.00 0.000 495 426 0.002921 0.002565 M4 3 3 3663 1.00 0.000 b2603 b2603 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2604 1713 1527 1.12 0.050 1985 1879 1.06 0.024 1620 1932 0.009558 0.011631 O4 3 3 3664 -1.22 -0.085 yfiN b2604 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2605 1001 661 1.52 0.181 429 561 -1.12 -0.050 831 495 0.004904 0.002981 M10 3 1 615 1.63 0.213 yfiB b2605 putative outer membrane protein putative membrane protein putative membrane; Not classified b2606 7543 8005 -1.06 -0.026 26397 27486 -1.04 -0.018 7774 26941 0.045874 0.162202 G3 3 2 1740 -3.54 -0.548 rplS b2606 50S ribosomal subunit protein L19 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b2607 20488 18220 1.12 0.051 46398 44752 1.04 0.016 19354 45575 0.114202 0.274387 I3 3 2 1741 -2.40 -0.381 trmD b2607 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b2608 2434 2420 1.01 0.002 7070 6680 1.06 0.025 2427 6875 0.014320 0.041392 A6 3 3 3665 -2.89 -0.461 yfjA b2608 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2609 6805 7828 -1.15 -0.061 17098 18120 -1.06 -0.025 7317 17609 0.043173 0.106015 K3 3 2 1742 -2.46 -0.390 rpsP b2609 30S ribosomal subunit protein S16 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b2610 2975 2107 1.41 0.150 2304 2493 -1.08 -0.034 2541 2399 0.014995 0.014442 B5 1 1 785 1.04 0.016 ffh b2610 "GTP-binding export factor binds to signal sequence, GTP and RNA" Transport and binding proteins "transport; Protein, peptide secretion" b2611 501 544 -1.09 -0.036 523 403 1.05 0.019 523 463 0.003086 0.002786 C6 3 3 3666 1.03 0.012 b2611 b2611 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2612 400 272 1.00 0.000 367 301 1.00 0.000 336 334 0.001981 0.002011 E6 3 3 3667 -1.00 0.000 ypjE b2612 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2613 3320 3314 1.00 0.001 1883 2473 -1.31 -0.118 3317 2178 0.019575 0.013113 G6 3 3 3668 1.49 0.174 yfjD b2613 putative transport protein Putative transport proteins putative transport; Not classified b2614 2401 2872 -1.20 -0.078 2874 2919 -1.02 -0.007 2636 2896 0.015555 0.017438 I21 4 1 373 -1.12 -0.050 grpE b2614 phage lambda replication; host DNA synthesis; heat shock protein; protein repair "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b2615 338 267 1.00 0.000 295 326 -1.00 0.000 302 310 0.001785 0.001869 I6 3 3 3669 -1.00 0.000 yfjB b2615 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2616 365 715 -1.43 -0.155 693 880 -1.27 -0.104 540 787 0.003185 0.004736 C7 1 2 1562 -1.49 -0.172 recN b2616 protein used in recombination and DNA repair "DNA replication, repair, restriction/modification" "putative enzyme; DNA - replication, repair, restriction/modification" b2617 1060 1472 -1.39 -0.143 982 934 1.05 0.022 1266 958 0.007471 0.005767 G8 2 1 508 1.30 0.112 smpA b2617 small membrane protein A "Hypothetical, unclassified, unknown" orf; Inner membrane b2618 1239 1178 1.05 0.022 1752 2019 -1.15 -0.062 1208 1886 0.007130 0.011352 K6 3 3 3670 -1.59 -0.202 b2618 b2618 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2619 2489 1998 1.25 0.095 2527 2446 1.03 0.014 2243 2486 0.013237 0.014970 M6 3 3 3671 -1.13 -0.053 b2619 b2619 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2620 1125 1021 1.10 0.042 2766 2496 1.11 0.045 1073 2631 0.006332 0.015841 O6 3 3 3672 -2.50 -0.398 smpB b2620 small protein B "Hypothetical, unclassified, unknown" orf; Unknown function b2622 620 797 -1.29 -0.109 603 598 1.01 0.004 709 600 0.004181 0.003614 K21 4 1 374 1.16 0.063 intA b2622 prophage CP4-57 integrase "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b2623 737 957 -1.30 -0.113 741 622 1.19 0.076 847 681 0.004997 0.004101 E7 1 2 1563 1.22 0.086 yfjH b2623 putative histone Putative factors putative factor; Not classified b2624 -8 74 -1.00 0.000 45 123 -1.00 0.000 33 84 0.000195 0.000506 M21 4 1 375 -1.00 0.000 alpA b2624 prophage CP4-57 regulatory protein alpA "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b2625 1092 1137 -1.04 -0.018 1225 1068 1.15 0.059 1114 1147 0.006574 0.006904 A8 3 3 3673 -1.05 -0.021 yfjI b2625 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2626 679 604 1.12 0.051 1310 1329 -1.01 -0.006 641 1320 0.003785 0.007945 C8 3 3 3674 -2.10 -0.322 yfjJ b2626 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2627 2741 2604 1.05 0.022 3192 2992 1.07 0.028 2672 3092 0.015767 0.018617 E8 3 3 3675 -1.18 -0.072 yfjK b2627 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2628 1060 982 1.08 0.033 751 898 -1.20 -0.078 1021 824 0.006024 0.004963 G8 3 3 3676 1.21 0.084 yfjL b2628 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2629 1745 1237 1.41 0.150 660 665 -1.01 -0.004 1491 662 0.008798 0.003988 I8 3 3 3677 2.21 0.344 yfjM b2629 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2630 874 907 -1.04 -0.016 584 724 -1.24 -0.093 890 654 0.005254 0.003937 F12 1 1 1195 1.33 0.125 yfjN b2630 putative cell division protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2631 405 343 1.00 0.000 295 266 1.00 0.000 374 280 0.002205 0.001689 K8 3 3 3678 1.00 0.000 yfjO b2631 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2632 1725 1817 -1.05 -0.023 1942 1998 -1.03 -0.012 1771 1970 0.010449 0.011861 M8 3 3 3679 -1.14 -0.055 yfjP b2632 putative GTP-binding protein "Hypothetical, unclassified, unknown" phenotype; Not classified b2633 220 370 -1.00 0.000 324 420 -1.00 0.000 295 372 0.001740 0.002240 O21 4 1 376 -1.00 0.000 yfjQ b2633 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2634 2190 2549 -1.16 -0.066 2742 2896 -1.06 -0.024 2370 2819 0.013982 0.016971 O8 3 3 3680 -1.21 -0.084 yfjR b2634 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2635 317 296 1.00 0.000 480 220 1.00 0.000 306 350 0.001808 0.002108 A10 3 3 3681 -1.00 0.000 b2635 b2635 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2636 196 9 1.00 0.000 85 7 1.00 0.000 103 46 0.000606 0.000277 C10 3 3 3682 1.00 0.000 b2636 b2636 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2637 2504 2499 1.00 0.001 4086 3779 1.08 0.034 2501 3932 0.014759 0.023674 E10 3 3 3683 -1.60 -0.205 yfjT b2637 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2638 162 50 1.00 0.000 171 125 1.00 0.000 106 148 0.000625 0.000890 G10 3 3 3684 -1.00 0.000 b2638 b2638 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2639 1063 938 1.13 0.054 457 478 -1.00 0.000 1000 468 0.005902 0.002816 H12 1 1 1196 1.97 0.294 b2639 b2639 putative pump protein Putative transport proteins putative transport; Not classified b2640 342 1370 -2.74 -0.438 352 171 1.00 0.000 856 261 0.005050 0.001574 I10 3 3 3685 1.68 0.226 b2640 b2640 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2641 -53 34 -1.00 0.000 30 12 1.00 0.000 -10 21 -0.000057 0.000124 K10 3 3 3686 -1.00 0.000 b2641 b2641 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2642 1131 650 1.74 0.240 1099 1096 1.00 0.001 890 1098 0.005254 0.006608 M10 3 3 3687 -1.26 -0.100 yfjW b2642 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2643 129 149 -1.00 0.000 487 531 -1.06 -0.026 139 509 0.000821 0.003064 O10 3 3 3688 -1.02 -0.009 yfjX b2643 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2644 770 351 1.54 0.187 431 525 -1.05 -0.021 560 478 0.003305 0.002877 G7 1 2 1564 1.10 0.042 yfjY b2644 putative DNA repair protein Putative enzymes putative enzyme; Not classified b2645 443 360 1.00 0.000 450 561 -1.12 -0.050 402 506 0.002372 0.003046 A12 3 3 3689 -1.02 -0.007 yfjZ b2645 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2646 250 -162 1.00 0.000 158 76 1.00 0.000 44 117 0.000259 0.000705 C12 3 3 3690 -1.00 0.000 ypjF b2646 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2647 936 955 -1.02 -0.009 1079 1275 -1.18 -0.073 945 1177 0.005579 0.007085 M3 3 2 1743 -1.27 -0.104 ypjA b2647 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b2648 89 68 1.00 0.000 -71 26 -1.00 0.000 79 -23 0.000464 -0.000137 E12 3 3 3691 1.00 0.000 b2648 b2648 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2649 121 54 1.00 0.000 32 34 -1.00 0.000 88 33 0.000518 0.000198 G12 3 3 3692 1.00 0.000 b2649 b2649 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2650 569 402 1.14 0.056 307 322 -1.00 0.000 485 314 0.002864 0.001893 I12 3 3 3693 1.00 0.000 b2650 b2650 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2651 -47 -77 1.00 0.000 -4 -78 1.00 0.000 -62 -41 -0.000366 -0.000248 K12 3 3 3694 -1.00 0.000 b2651 b2651 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2653 358 410 -1.00 0.000 722 937 -1.30 -0.113 384 829 0.002266 0.004992 M12 3 3 3695 -1.66 -0.221 b2653 b2653 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2654 483 373 1.00 0.000 478 659 -1.32 -0.120 428 568 0.002526 0.003420 O12 3 3 3696 -1.14 -0.057 b2654 b2654 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2655 1230 827 1.49 0.172 531 656 -1.24 -0.092 1028 594 0.006069 0.003574 A14 3 3 3697 1.70 0.230 b2655 b2655 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2656 751 595 1.26 0.101 686 512 1.34 0.127 673 599 0.003974 0.003605 C14 3 3 3698 1.10 0.042 b2656 b2656 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2657 5732 5723 1.00 0.001 5693 5411 1.05 0.022 5727 5552 0.033795 0.033424 L7 3 2 2526 1.01 0.005 b2657 b2657 putative enzyme Putative enzymes putative enzyme; Not classified b2658 -22 69 -1.00 0.000 97 178 -1.00 0.000 24 138 0.000139 0.000828 E14 3 3 3699 -1.00 0.000 b2658 b2658 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2659 2100 933 2.25 0.352 635 577 1.10 0.042 1516 606 0.008948 0.003649 G14 3 3 3700 2.45 0.390 b2659 b2659 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2660 1255 926 1.36 0.132 224 423 -1.00 0.000 1090 324 0.006434 0.001948 I14 3 3 3701 2.14 0.331 ygaF b2660 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2661 1897 1677 1.13 0.053 1130 1099 1.03 0.012 1787 1115 0.010546 0.006710 G22 3 2 2196 1.57 0.196 gabD b2661 "succinate-semialdehyde dehydrogenase, NADP-dependent activity" Carbon compound catabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2662 1067 881 1.21 0.083 685 618 1.11 0.045 974 651 0.005747 0.003921 I22 3 2 2197 1.47 0.166 gabT b2662 4-aminobutyrate aminotransferase activity Carbon compound catabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2663 896 794 1.13 0.052 367 339 1.00 0.000 845 353 0.004988 0.002125 D5 1 1 786 1.66 0.221 gabP b2663 transport permease protein of gamma-aminobutyrate Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2664 5499 4597 1.20 0.078 4421 3965 1.11 0.047 5048 4193 0.029788 0.025244 C15 3 1 250 1.18 0.072 ygaE b2664 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2665 3840 2297 1.67 0.223 1070 1069 1.00 0.000 3069 1070 0.018108 0.006439 K14 3 3 3702 2.81 0.449 ygaU b2665 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2666 1749 1261 1.39 0.142 1454 1292 1.13 0.051 1505 1373 0.008879 0.008265 M14 3 3 3703 1.07 0.031 b2666 b2666 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2667 1689 959 1.76 0.246 2026 1577 1.28 0.109 1324 1801 0.007813 0.010844 O14 3 3 3704 -1.39 -0.142 b2667 b2667 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2668 613 483 1.23 0.088 1195 1183 1.01 0.005 548 1189 0.003232 0.007159 N7 3 2 2527 -2.21 -0.345 ygaP b2668 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2669 1885 1595 1.18 0.072 1471 1357 1.08 0.035 1740 1414 0.010267 0.008513 I7 1 2 1565 1.21 0.081 stpA b2669 DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing? Regulatory function "regulator; Basic proteins - synthesis, modification" b2670 963 670 1.44 0.157 497 585 -1.17 -0.068 817 541 0.004818 0.003256 A16 3 3 3705 1.48 0.170 b2670 b2670 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2671 1071 770 1.39 0.143 315 243 1.00 0.000 920 279 0.005431 0.001679 C16 3 3 3706 1.81 0.258 ygaC b2671 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2672 1590 1568 1.01 0.006 268 103 1.00 0.000 1579 185 0.009318 0.001115 E16 3 3 3707 3.11 0.492 ygaM b2672 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2673 5302 4782 1.11 0.045 1048 1225 -1.17 -0.068 5042 1136 0.029751 0.006841 G16 3 3 3708 4.35 0.638 nrdH b2673 glutaredoxin-like protein; hydrogen donor Nucleotide biosynthesis and metabolism "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b2674 7037 6823 1.03 0.013 1712 1770 -1.03 -0.015 6930 1741 0.040892 0.010481 I16 3 3 3709 3.90 0.591 nrdI b2674 "orf, hypothetical protein" Nucleotide biosynthesis and metabolism phenotype; Unknown b2675 2639 2557 1.03 0.014 1008 644 1.57 0.195 2598 826 0.015331 0.004974 K22 3 2 2198 3.08 0.489 nrdE b2675 "ribonucleoside-diphosphate reductase 2, alpha subunit" Nucleotide biosynthesis and metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b2676 1768 1725 1.02 0.011 645 495 1.29 0.110 1746 570 0.010305 0.003430 M22 3 2 2199 3.00 0.478 nrdF b2676 "ribonucleoside-diphosphate reductase 2, beta chain, frag" Nucleotide biosynthesis and metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b2677 26978 21721 1.24 0.094 14695 14891 -1.01 -0.006 24349 14793 0.143679 0.089062 F5 1 1 787 1.61 0.208 proV b2677 "ATP-binding component of transport system for glycine, betaine and proline" Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2678 727 804 -1.11 -0.044 465 396 1.00 0.000 765 431 0.004517 0.002593 H5 1 1 788 1.51 0.178 proW b2678 high-affinity transport system for glycine betaine and proline Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b2679 844 838 1.01 0.003 440 388 1.00 0.000 841 414 0.004962 0.002492 J12 1 1 1197 1.65 0.219 proX b2679 high-affinity transport system for glycine betaine and proline Transport and binding proteins transport; Osmotic adaptation b2680 3736 2937 1.27 0.104 3010 2713 1.11 0.045 3337 2862 0.019688 0.017228 K16 3 3 3710 1.14 0.058 b2680 b2680 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2681 3587 3172 1.13 0.053 530 716 -1.35 -0.130 3379 623 0.019940 0.003753 J9 3 1 997 5.31 0.725 b2681 b2681 putative transport protein Putative transport proteins putative transport; Not classified b2682 2722 3140 -1.15 -0.062 2938 3362 -1.14 -0.059 2931 3150 0.017294 0.018967 M16 3 3 3711 -1.10 -0.040 b2682 b2682 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2683 1047 954 1.10 0.040 1820 2028 -1.11 -0.047 1000 1924 0.005903 0.011586 O16 3 3 3712 -1.96 -0.293 ygaH b2683 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2684 924 1037 -1.12 -0.050 1434 1749 -1.22 -0.086 980 1592 0.005784 0.009584 A23 4 1 377 -1.66 -0.219 emrR b2684 regulator of plasmid mcrB operon (microcin B17 synthesis) Regulatory function regulator; Plasmid-related functions b2685 334 280 1.00 0.000 517 559 -1.08 -0.034 307 538 0.001812 0.003240 L12 1 1 1198 -1.08 -0.033 emrA b2685 multidrug resistance secretion protein Cell processes transport; Drug/analog sensitivity b2686 3127 3110 1.01 0.002 3160 3131 1.01 0.004 3118 3146 0.018400 0.018939 N12 1 1 1199 -1.03 -0.013 emrB b2686 multidrug resistance; probably membrane translocase Putative transport proteins putative transport; Drug/analog sensitivity b2687 5734 5877 -1.02 -0.011 2600 2416 1.08 0.032 5806 2508 0.034258 0.015101 A18 3 3 3713 2.27 0.356 ygaG b2687 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2688 42211 32617 1.29 0.112 28445 31524 -1.11 -0.045 37414 29984 0.220767 0.180522 B11 1 2 2345 1.22 0.087 gshA b2688 gamma-glutamate-cysteine ligase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b2689 1891 1507 1.25 0.099 1777 1901 -1.07 -0.029 1699 1839 0.010026 0.011071 C18 3 3 3714 -1.10 -0.043 b2689 b2689 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2690 2266 1475 1.54 0.186 1670 1618 1.03 0.014 1870 1644 0.011036 0.009898 E18 3 3 3715 1.12 0.047 yqaB b2690 putative phosphatase Putative enzymes putative enzyme; Not classified b2696 2662 3839 -1.44 -0.159 1186 1607 -1.35 -0.132 3251 1397 0.019181 0.008409 O13 2 1 152 2.28 0.358 csrA b2696 "carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties" Regulatory function regulator; Global regulatory functions b2697 14370 11413 1.26 0.100 15859 15662 1.01 0.005 12891 15760 0.076068 0.094886 O3 3 2 1744 -1.25 -0.096 alaS b2697 alanyl-tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b2698 504 467 1.01 0.003 407 285 1.00 0.000 485 346 0.002865 0.002084 E15 3 1 251 1.00 0.000 oraA b2698 "regulator, OraA protein" Putative regulatory proteins putative regulator; Not classified b2699 1895 1575 1.20 0.080 2626 2281 1.15 0.061 1735 2453 0.010237 0.014771 K7 1 2 1566 -1.44 -0.159 recA b2699 "DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2700 4233 3859 1.10 0.040 1540 1418 1.09 0.036 4046 1479 0.023872 0.008904 G18 3 3 3716 2.68 0.428 ygaD b2700 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2701 1337 1674 -1.25 -0.098 879 1074 -1.22 -0.087 1505 976 0.008883 0.005878 I8 2 1 509 1.51 0.179 mltB b2701 membrane-bound lytic murein transglycosylase B Cell structure "enzyme; Murein sacculus, peptidoglycan" b2702 7959 6578 1.21 0.083 8392 7646 1.10 0.040 7268 8019 0.042889 0.048278 J5 1 1 789 -1.13 -0.051 srlA b2702 "PTS system, glucitol/sorbitol-specific IIC component, one of two" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2703 482 510 -1.02 -0.008 493 777 -1.55 -0.191 496 635 0.002927 0.003821 L5 1 1 790 -1.27 -0.105 srlE b2703 "PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2704 101 128 -1.00 0.000 153 147 1.00 0.000 115 150 0.000676 0.000903 N5 1 1 791 -1.00 0.000 srlB b2704 "PTS system, glucitol/sorbitol-specific enzyme IIA component" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2705 7237 6789 1.07 0.028 4551 4390 1.04 0.016 7013 4470 0.041381 0.026914 G15 1 1 60 1.54 0.187 srlD b2705 glucitol (sorbitol)-6-phosphate dehydrogenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2706 784 648 1.21 0.083 406 232 1.00 0.000 716 319 0.004227 0.001921 I15 1 1 61 1.41 0.149 gutM b2706 glucitol operon activator Regulatory function regulator; Degradation of small molecules: Carbon compounds b2707 3426 3203 1.07 0.029 1040 1192 -1.15 -0.059 3314 1116 0.019556 0.006719 K15 1 1 62 2.91 0.464 srlR b2707 "regulator for gut (srl), glucitol operon" Regulatory function regulator; Degradation of small molecules: Carbon compounds b2708 612 732 -1.20 -0.078 502 493 1.00 0.002 672 498 0.003966 0.002996 M15 1 1 63 1.32 0.121 gutQ b2708 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2709 2664 2559 1.04 0.017 1033 907 1.14 0.056 2612 970 0.015411 0.005840 G15 3 1 252 2.64 0.421 ygaA b2709 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2710 2700 2439 1.11 0.044 1638 1517 1.08 0.033 2570 1578 0.015164 0.009498 P7 3 2 2528 1.60 0.203 b2710 b2710 putative flavodoxin Putative enzymes putative enzyme; Not classified b2711 1754 1242 1.41 0.150 1006 1086 -1.08 -0.033 1498 1046 0.008840 0.006297 B9 3 2 2529 1.40 0.147 ygbD b2711 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2712 27953 31692 -1.13 -0.055 16972 17291 -1.02 -0.008 29822 17131 0.175973 0.103141 I15 3 1 253 1.71 0.232 hypF b2712 transcriptional regulatory protein Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b2713 739 548 1.35 0.130 385 419 -1.00 0.000 643 402 0.003797 0.002421 H16 3 1 1404 1.27 0.102 hydN b2713 "involved in electron transport from formate to hydrogen, Fe-S centers" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2714 2213 2404 -1.09 -0.036 2288 2239 1.02 0.009 2308 2263 0.013620 0.013627 O15 1 1 64 -1.00 0.000 ascG b2714 ascBF operon repressor Regulatory function regulator; Degradation of small molecules: Carbon compounds b2715 1107 1080 1.02 0.011 669 601 1.11 0.047 1094 635 0.006454 0.003822 P5 1 1 792 1.69 0.227 ascF b2715 "PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2716 915 970 -1.06 -0.025 956 961 -1.01 -0.002 942 958 0.005560 0.005768 A17 1 1 65 -1.04 -0.016 ascB b2716 6-phospho-beta-glucosidase; cryptic Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2717 3472 3188 1.09 0.037 2227 1539 1.45 0.160 3330 1883 0.019649 0.011338 I18 3 3 3717 1.73 0.239 hycI b2717 protease involved in processing C-terminal end of the large subunit of hydrogenase 3 Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b2718 2994 2556 1.17 0.069 1953 1973 -1.01 -0.005 2775 1963 0.016376 0.011818 J16 3 1 1405 1.39 0.142 hycH b2718 processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex) Energy metabolism "factor; Energy metabolism, carbon: Fermentation" b2719 1196 987 1.21 0.083 521 831 -1.60 -0.203 1092 676 0.006441 0.004072 L16 3 1 1406 1.58 0.199 hycG b2719 hydrogenase activity Energy metabolism "phenotype; Energy metabolism, carbon: Fermentation" b2720 938 1015 -1.08 -0.034 1039 1098 -1.06 -0.024 976 1069 0.005762 0.006435 N16 3 1 1407 -1.12 -0.048 hycF b2720 probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) Putative enzymes "putative enzyme; Energy metabolism, carbon: Fermentation" b2721 950 1000 -1.05 -0.022 1014 775 1.31 0.117 975 894 0.005754 0.005384 P16 3 1 1408 1.07 0.029 hycE b2721 large subunit of hydrogenase 3 (part of FHL complex) Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b2722 1909 1355 1.41 0.149 783 526 1.49 0.173 1632 655 0.009632 0.003942 B18 3 1 1409 2.44 0.388 hycD b2722 membrane-spanning protein of hydrogenase 3 (part of FHL complex) Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b2723 362 420 -1.00 0.000 202 315 -1.00 0.000 391 259 0.002308 0.001559 D18 3 1 1410 1.00 0.000 hycC b2723 membrane-spanning protein of hydrogenase 3 (part of FHL complex) Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b2724 2035 1458 1.40 0.145 737 486 1.47 0.168 1746 611 0.010304 0.003680 F18 3 1 1411 2.80 0.447 hycB b2724 "probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex)" Putative enzymes "putative enzyme; Energy metabolism, carbon: Fermentation" b2725 3289 2440 1.35 0.130 2849 2718 1.05 0.020 2864 2783 0.016901 0.016757 H18 3 1 1412 1.01 0.004 hycA b2725 transcriptional repression of hyc and hyp operons Regulatory function "regulator; Energy metabolism, carbon: Fermentation" b2726 4432 3082 1.44 0.158 1386 1602 -1.16 -0.063 3757 1494 0.022170 0.008993 J18 3 1 1413 2.47 0.392 hypA b2726 pleiotrophic effects on 3 hydrogenase isozymes Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b2727 9706 8888 1.09 0.038 6077 6343 -1.04 -0.019 9297 6210 0.054858 0.037387 L18 3 1 1414 1.47 0.167 hypB b2727 "guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3" Energy metabolism "phenotype; Energy metabolism, carbon: Fermentation" b2728 2004 2123 -1.06 -0.025 1080 1174 -1.09 -0.036 2064 1127 0.012177 0.006787 N18 3 1 1415 1.79 0.254 hypC b2728 pleiotrophic effects on 3 hydrogenase isozymes Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b2729 5390 5468 -1.01 -0.006 2599 1938 1.34 0.127 5429 2268 0.032036 0.013658 P18 3 1 1416 2.35 0.370 hypD b2729 pleiotrophic effects on 3 hydrogenase isozymes Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b2730 835 -1082 1.67 0.223 1438 902 1.59 0.202 -124 1170 -0.000730 0.007044 B20 3 1 1417 -2.35 -0.371 hypE b2730 plays structural role in maturation of all 3 hydrogenases Energy metabolism "factor; Energy metabolism, carbon: Anaerobic respiration" b2731 717 412 1.43 0.157 441 326 1.00 0.000 564 383 0.003330 0.002307 D20 3 1 1418 1.11 0.045 fhlA b2731 "formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons" Regulatory function "regulator; Energy metabolism, carbon: Fermentation" b2732 701 624 1.12 0.051 398 217 1.00 0.000 663 308 0.003911 0.001852 K18 3 3 3718 1.30 0.115 ygbA b2732 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2733 466 398 1.00 0.000 625 556 1.12 0.051 432 590 0.002548 0.003553 M7 1 2 1567 -1.18 -0.073 mutS b2733 methyl-directed mismatch repair "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2734 402 120 1.00 0.000 175 265 -1.00 0.000 261 220 0.001540 0.001325 K15 3 1 254 1.00 0.000 pphB b2734 protein phosphatase 2 Putative regulatory proteins enzyme; Not classified b2735 1002 909 1.10 0.042 580 595 -1.03 -0.012 955 587 0.005637 0.003537 M15 3 1 255 1.59 0.202 ygbI b2735 putative DEOR-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2736 2027 2279 -1.12 -0.051 1616 1591 1.02 0.007 2153 1603 0.012704 0.009653 D9 3 2 2530 1.32 0.119 b2736 b2736 putative dehydrogenase Putative enzymes putative enzyme; Not classified b2737 689 505 1.37 0.135 705 670 1.05 0.022 597 688 0.003522 0.004140 M18 3 3 3719 -1.18 -0.070 b2737 b2737 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2738 794 535 1.48 0.171 452 530 -1.06 -0.025 664 491 0.003920 0.002957 F9 3 2 2531 1.31 0.116 ygbL b2738 putative epimerase/aldolase Putative enzymes putative enzyme; Not classified b2739 2215 1613 1.37 0.138 2847 2367 1.20 0.080 1914 2607 0.011294 0.015696 O18 3 3 3720 -1.39 -0.143 ygbM b2739 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2740 3441 2843 1.21 0.083 2912 2755 1.06 0.024 3142 2833 0.018539 0.017058 H9 3 2 2532 1.09 0.036 b2740 b2740 putative transport protein Putative transport proteins putative transport; Not classified b2741 8167 9142 -1.12 -0.049 1080 1828 -1.69 -0.229 8654 1454 0.051067 0.008753 A3 2 2 1641 5.83 0.766 rpoS b2741 "RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins" Regulatory function enzyme; Global regulatory functions b2742 13703 10511 1.30 0.115 3174 2397 1.32 0.122 12107 2786 0.071439 0.016772 E4 3 1 587 4.26 0.629 nlpD b2742 lipoprotein Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b2743 2263 757 2.99 0.476 2965 2602 1.14 0.057 1510 2784 0.008911 0.016759 A5 3 2 1745 -1.88 -0.274 pcm b2743 L-isoaspartate protein carboxylmethyltransferase type II "Translation, post-translational modification" enzyme; Proteins - translation and modification b2744 21742 18650 1.17 0.067 13304 13305 -1.00 0.000 20196 13305 0.119171 0.080102 J13 4 2 2645 1.49 0.173 surE b2744 survival protein Cell processes phenotype; Not classified b2745 1259 1060 1.19 0.075 1150 1202 -1.05 -0.019 1159 1176 0.006841 0.007082 A20 3 3 3721 -1.04 -0.015 ygbO b2745 putative hydrogenase subunit Putative enzymes putative enzyme; Not classified b2746 409 341 1.00 0.000 318 333 -1.00 0.000 375 325 0.002212 0.001958 C20 3 3 3722 1.00 0.000 ygbB b2746 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2747 966 603 1.60 0.205 1075 881 1.22 0.086 784 978 0.004628 0.005888 E20 3 3 3723 -1.27 -0.105 ygbP b2747 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2748 1623 1037 1.57 0.195 2217 2233 -1.01 -0.003 1330 2225 0.007847 0.013396 G20 3 3 3724 -1.71 -0.232 b2748 b2748 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2749 1546 780 1.98 0.297 1455 1097 1.33 0.122 1163 1276 0.006864 0.007683 F20 3 1 1419 -1.12 -0.049 ygbE b2749 putative cytochrome oxidase subunit Putative enzymes putative enzyme; Not classified b2750 873 573 1.53 0.183 545 407 1.09 0.037 723 476 0.004266 0.002865 O22 3 2 2200 1.42 0.153 cysC b2750 adenosine 5'-phosphosulfate kinase Central intermediary metabolism enzyme; Central intermediary metabolism: Sulfur metabolism b2751 5426 4387 1.24 0.092 2603 2680 -1.03 -0.013 4906 2641 0.028952 0.015903 N6 2 3 2201 1.82 0.260 cysN b2751 "ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase" Central intermediary metabolism enzyme; Central intermediary metabolism: Sulfur metabolism b2752 3162 2183 1.45 0.161 1115 1100 1.01 0.006 2673 1107 0.015771 0.006666 C24 3 2 2202 2.37 0.374 cysD b2752 "ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2" Central intermediary metabolism enzyme; Central intermediary metabolism: Sulfur metabolism b2753 2094 1823 1.15 0.060 2555 2410 1.06 0.025 1959 2483 0.011557 0.014946 C5 3 2 1746 -1.29 -0.112 iap b2753 "alkaline phosphatase isozyme conversion, aminopeptidase" "Translation, post-translational modification" enzyme; Proteins - translation and modification b2754 436 414 1.00 0.000 230 365 -1.00 0.000 425 297 0.002509 0.001789 I20 3 3 3725 1.00 0.000 ygbF b2754 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2755 5127 4150 1.24 0.092 4097 3997 1.02 0.011 4638 4047 0.027369 0.024367 K20 3 3 3726 1.12 0.050 b2755 b2755 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2756 961 900 1.07 0.029 1041 729 1.43 0.155 930 885 0.005490 0.005325 M20 3 3 3727 1.03 0.013 b2756 b2756 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2757 884 783 1.13 0.052 832 657 1.27 0.102 834 745 0.004919 0.004484 O20 3 3 3728 1.10 0.040 b2757 b2757 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2758 3571 3209 1.11 0.046 2501 2287 1.09 0.039 3390 2394 0.020001 0.014413 A22 3 3 3729 1.39 0.142 b2758 b2758 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2759 259 182 1.00 0.000 89 180 -1.00 0.000 221 134 0.001301 0.000809 C22 3 3 3730 1.00 0.000 ygcK b2759 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2760 921 597 1.54 0.188 780 1032 -1.32 -0.122 759 906 0.004479 0.005457 E22 3 3 3731 -1.22 -0.086 b2760 b2760 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2761 1884 1535 1.23 0.089 1756 1959 -1.12 -0.048 1709 1858 0.010087 0.011184 G22 3 3 3732 -1.11 -0.045 ygcB b2761 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2762 812 715 1.14 0.055 605 536 1.13 0.053 764 570 0.004507 0.003433 E24 3 2 2203 1.31 0.118 cysH b2762 3'-phosphoadenosine 5'-phosphosulfate reductase Central intermediary metabolism enzyme; Central intermediary metabolism: Sulfur metabolism b2763 2478 2965 -1.20 -0.078 2882 2685 1.07 0.031 2722 2783 0.016059 0.016758 G24 3 2 2204 -1.04 -0.018 cysI b2763 "sulfite reductase, alpha subunit" Central intermediary metabolism enzyme; Central intermediary metabolism: Sulfur metabolism b2764 4159 4016 1.04 0.015 2650 2162 1.23 0.088 4087 2406 0.024118 0.014486 I24 3 2 2205 1.66 0.221 cysJ b2764 "sulfite reductase (NADPH), flavoprotein beta subunit" Central intermediary metabolism enzyme; Central intermediary metabolism: Sulfur metabolism b2765 973 1032 -1.06 -0.025 916 945 -1.03 -0.013 1002 930 0.005914 0.005600 K24 3 2 2206 1.06 0.024 ygcM b2765 putative 6-pyruvoyl tetrahydrobiopterin synthase Putative enzymes putative enzyme; Not classified b2766 1285 900 1.43 0.154 1289 1405 -1.09 -0.038 1093 1347 0.006448 0.008108 I22 3 3 3733 -1.26 -0.100 ygcN b2766 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2767 1523 1472 1.03 0.015 1759 1630 1.08 0.033 1498 1694 0.008837 0.010201 K22 3 3 3734 -1.15 -0.062 ygcO b2767 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2768 1712 1903 -1.11 -0.046 1143 1075 1.06 0.027 1807 1109 0.010665 0.006675 O15 3 1 256 1.60 0.204 ygcP b2768 putative anti-terminator regulatory protein Putative regulatory proteins putative regulator; Not classified b2769 585 415 1.17 0.068 471 492 -1.00 0.000 500 482 0.002950 0.002900 H20 3 1 1420 1.00 0.000 ygcQ b2769 putative flavoprotein Putative enzymes putative enzyme; Not classified b2770 745 2630 -3.53 -0.548 898 1121 -1.25 -0.096 1688 1010 0.009957 0.006079 J20 3 1 1421 1.64 0.214 ygcR b2770 putative transport protein Putative transport proteins putative transport; Not classified b2771 406 364 1.00 0.000 290 167 1.00 0.000 385 229 0.002273 0.001377 L9 3 1 998 1.00 0.000 ygcS b2771 putative transport protein Putative transport proteins putative transport; Not classified b2772 856 741 1.16 0.063 1109 802 1.38 0.141 798 956 0.004712 0.005753 M22 3 3 3735 -1.22 -0.087 b2772 b2772 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2773 1374 1150 1.19 0.077 2114 1578 1.34 0.127 1262 1846 0.007448 0.011114 O22 3 3 3736 -1.49 -0.174 ygcU b2773 putative oxidoreductase subunit Putative enzymes putative enzyme; Not classified b2774 1675 1733 -1.04 -0.015 1890 1817 1.04 0.017 1704 1854 0.010055 0.011160 J9 3 2 2533 -1.11 -0.045 ygcW b2774 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2775 237 285 -1.00 0.000 73 109 -1.00 0.000 261 91 0.001539 0.000549 N9 3 1 999 1.00 0.000 yqcE b2775 putative transport protein Putative transport proteins putative transport; Not classified b2776 1662 906 1.83 0.264 1547 1143 1.35 0.131 1284 1345 0.007576 0.008098 L9 3 2 2534 -1.07 -0.029 ygcE b2776 putative kinase Putative enzymes putative enzyme; Not classified b2777 559 562 -1.01 -0.002 910 976 -1.07 -0.030 561 943 0.003309 0.005675 N10 2 3 3737 -1.72 -0.234 ygcF b2777 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2778 1602 1420 1.13 0.052 1211 1256 -1.04 -0.016 1511 1233 0.008916 0.007425 C24 3 3 3738 1.20 0.079 ygcG b2778 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2779 15594 13910 1.12 0.050 14900 15940 -1.07 -0.029 14752 15420 0.087045 0.092837 L20 3 1 1422 -1.07 -0.028 eno b2779 enolase Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b2780 4187 4038 1.04 0.016 4575 3927 1.16 0.066 4113 4251 0.024267 0.025593 M24 3 2 2207 -1.05 -0.023 pyrG b2780 CTP synthetase Nucleotide biosynthesis and metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b2781 4427 3915 1.13 0.053 4351 4333 1.00 0.002 4171 4342 0.024611 0.026142 E24 3 3 3739 -1.06 -0.026 mazG b2781 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2782 1502 1573 -1.05 -0.020 697 777 -1.11 -0.047 1538 737 0.009074 0.004440 L13 4 2 2646 2.04 0.310 chpA b2782 "probable growth inhibitor, PemK-like, autoregulated" Putative factors putative factor; Not classified b2783 2575 2991 -1.16 -0.065 2871 3229 -1.12 -0.051 2783 3050 0.016422 0.018361 N13 4 2 2647 -1.12 -0.048 chpR b2783 "suppressor of inhibitory function of ChpA, PemI-like, autoregulated" Cell processes phenotype; Not classified b2784 6512 6034 1.08 0.033 7453 7632 -1.02 -0.010 6273 7542 0.037015 0.045409 A15 2 1 153 -1.23 -0.089 relA b2784 (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor Regulatory function enzyme; Global regulatory functions b2785 2259 1688 1.34 0.127 1965 1616 1.22 0.085 1974 1790 0.011645 0.010780 E5 3 2 1747 1.08 0.034 ygcA b2785 putative enzyme Putative enzymes putative enzyme; Not classified b2786 112 82 1.00 0.000 -110 2 -1.00 0.000 97 -54 0.000573 -0.000326 C15 2 1 154 1.00 0.000 barA b2786 "sensor-regulator, activates OmpR by phophorylation" Regulatory function enzyme; Global regulatory functions b2787 1263 1187 1.06 0.027 1122 945 1.19 0.075 1225 1034 0.007228 0.006224 C17 1 1 66 1.16 0.065 ygcX b2787 putative glucarate dehydratase Putative enzymes putative enzyme; Not classified b2788 1580 2091 -1.32 -0.122 691 841 -1.22 -0.086 1835 766 0.010829 0.004611 E17 1 1 67 2.35 0.371 ygcY b2788 putative glucarate dehydratase Putative enzymes putative enzyme; Not classified b2789 782 642 1.22 0.086 588 634 -1.08 -0.033 712 611 0.004201 0.003681 G17 1 1 68 1.14 0.057 b2789 b2789 putative transport protein Putative transport proteins putative transport; Not classified b2790 16797 15392 1.09 0.038 21229 20816 1.02 0.009 16095 21023 0.094971 0.126569 G24 3 3 3740 -1.33 -0.125 b2790 b2790 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2791 5782 4823 1.20 0.079 5520 5478 1.01 0.003 5302 5499 0.031288 0.033107 I24 3 3 3741 -1.06 -0.025 yqcB b2791 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2792 1990 2081 -1.05 -0.019 2392 2252 1.06 0.026 2035 2322 0.012011 0.013980 K24 3 3 3742 -1.16 -0.066 b2792 b2792 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2793 3448 3378 1.02 0.009 4138 3998 1.03 0.015 3413 4068 0.020138 0.024492 M24 3 3 3743 -1.22 -0.085 syd b2793 interacts with secY "Hypothetical, unclassified, unknown" orf; Unknown function b2794 3177 3256 -1.02 -0.011 3897 4281 -1.10 -0.041 3216 4089 0.018978 0.024618 O24 3 3 3744 -1.30 -0.113 yqcD b2794 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2795 1224 1168 1.05 0.021 712 897 -1.26 -0.100 1196 805 0.007058 0.004845 A2 4 3 3745 1.46 0.163 ygdH b2795 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2796 1799 1658 1.08 0.035 3629 4043 -1.11 -0.047 1728 3836 0.010197 0.023096 B7 1 1 793 -2.26 -0.355 sdaC b2796 probable serine transporter Putative transport proteins "putative transport; Transport of small molecules: Amino acids, amines" b2797 2567 2495 1.03 0.012 3855 3996 -1.04 -0.016 2531 3926 0.014936 0.023634 E2 1 2 1923 -1.58 -0.199 sdaB b2797 "L-serine dehydratase (deaminase), L-SD2" Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b2798 865 714 1.21 0.084 156 473 -1.00 0.000 789 315 0.004658 0.001894 C3 2 2 1642 1.55 0.191 exo b2798 5'-3' exonuclease "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2799 638 470 1.28 0.106 262 218 1.00 0.000 554 240 0.003268 0.001445 I17 1 1 69 1.09 0.037 fucO b2799 "L-1,2-propanediol oxidoreductase" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2800 169 146 1.00 0.000 172 132 1.00 0.000 157 152 0.000928 0.000915 K17 1 1 70 1.00 0.000 fucA b2800 L-fuculose-1-phosphate aldolase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2801 2041 1543 1.32 0.121 796 674 1.18 0.072 1792 735 0.010574 0.004424 D7 1 1 794 2.39 0.378 fucP b2801 fucose permease Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2802 2036 1898 1.07 0.031 2679 2587 1.04 0.015 1967 2633 0.011605 0.015852 M17 1 1 71 -1.37 -0.135 fucI b2802 L-fucose isomerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2803 1830 1780 1.03 0.012 1117 1048 1.07 0.028 1805 1082 0.010650 0.006516 O17 1 1 72 1.63 0.213 fucK b2803 L-fuculokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2804 623 691 -1.11 -0.045 602 519 1.16 0.064 657 560 0.003876 0.003374 A19 1 1 73 1.15 0.060 fucU b2804 protein of fucose operon Carbon compound catabolism phenotype; Degradation of small molecules: Carbon compounds b2805 654 498 1.31 0.116 338 291 1.00 0.000 576 314 0.003397 0.001893 C19 1 1 74 1.13 0.054 fucR b2805 positive regulator of the fuc operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b2806 5409 5665 -1.05 -0.020 5062 4686 1.08 0.034 5537 4874 0.032672 0.029342 C2 4 3 3746 1.11 0.047 ygdE b2806 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2807 819 943 -1.15 -0.061 765 717 1.07 0.028 881 741 0.005200 0.004462 E2 4 3 3747 1.17 0.067 ygdD b2807 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2808 1299 496 2.60 0.415 1557 982 1.59 0.200 897 1270 0.005295 0.007644 O24 3 2 2208 -1.44 -0.159 gcvA b2808 positive regulator of gcv operon Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b2809 2037 2622 -1.29 -0.109 795 967 -1.22 -0.085 2330 881 0.013746 0.005306 G2 4 3 3748 2.59 0.413 b2809 b2809 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2810 3596 3540 1.02 0.007 2689 2487 1.08 0.034 3568 2588 0.021053 0.015579 I2 4 3 3749 1.35 0.131 b2810 b2810 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2811 4348 5399 -1.24 -0.094 5812 6557 -1.13 -0.052 4873 6184 0.028755 0.037234 K2 4 3 3750 -1.29 -0.112 ygdK b2811 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2812 4232 5813 -1.37 -0.138 5733 5313 1.08 0.033 5023 5523 0.029639 0.033251 M2 4 3 3751 -1.12 -0.050 ygdL b2812 putative enzyme Putative enzymes putative enzyme; Not classified b2813 1192 1632 -1.37 -0.137 517 1015 -1.96 -0.293 1412 766 0.008333 0.004612 K8 2 1 510 1.81 0.257 mltA b2813 membrane-bound lytic murein transglycosylase A Cell structure "enzyme; Murein sacculus, peptidoglycan" b2817 51151 49114 1.04 0.018 36916 36252 1.02 0.008 50132 36584 0.295817 0.220257 M8 2 1 511 1.34 0.128 b2817 b2817 putative amidase Putative enzymes putative enzyme; Not classified b2818 1916 1710 1.12 0.049 752 525 1.43 0.156 1813 639 0.010696 0.003846 G2 1 2 1924 2.78 0.444 argA b2818 N-acetylglutamate synthase; amino acid acetyltransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b2819 339 701 -1.40 -0.146 746 902 -1.21 -0.082 520 824 0.003068 0.004962 E3 2 2 1643 -1.62 -0.209 recD b2819 "DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2820 619 2650 -4.28 -0.631 866 2424 -2.80 -0.447 1635 1645 0.009647 0.009904 G3 2 2 1644 -1.03 -0.011 recB b2820 "DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2821 3279 3082 1.06 0.027 13501 13030 1.04 0.015 3181 13265 0.018769 0.079865 G5 3 2 1748 -4.26 -0.629 ptr b2821 protease III Cell processes "enzyme; Degradation of proteins, peptides, glyco" b2822 293 238 1.00 0.000 579 948 -1.64 -0.215 265 763 0.001565 0.004597 I3 2 2 1645 -1.53 -0.185 recC b2822 "DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2823 543 373 1.09 0.036 453 484 -1.00 0.000 458 468 0.002704 0.002821 P13 4 2 2648 -1.00 0.000 ppdC b2823 prepilin peptidase dependent protein C Putative enzymes putative enzyme; Not classified b2824 1433 951 1.51 0.178 1430 1425 1.00 0.001 1192 1427 0.007033 0.008594 O2 4 3 3752 -1.22 -0.087 ygdB b2824 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2825 357 504 -1.01 -0.003 500 527 -1.05 -0.023 430 514 0.002540 0.003092 B15 4 2 2649 -1.03 -0.013 ppdB b2825 prepilin peptidase dependent protein B Putative enzymes putative enzyme; Not classified b2826 4629 5459 -1.18 -0.072 2299 2567 -1.12 -0.048 5044 2433 0.029763 0.014647 D15 4 2 2650 2.03 0.308 ppdA b2826 prepilin peptidase dependent protein A Putative enzymes putative enzyme; Not classified b2827 591 920 -1.56 -0.192 1479 1647 -1.11 -0.047 756 1563 0.004458 0.009410 M2 2 2 2023 -2.11 -0.324 thyA b2827 thymidylate synthetase Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b2828 1152 1159 -1.01 -0.003 2190 2357 -1.08 -0.032 1156 2273 0.006819 0.013687 K14 2 2 2070 -2.01 -0.303 lgt b2828 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b2829 8769 8199 1.07 0.029 8259 8531 -1.03 -0.014 8484 8395 0.050060 0.050543 F7 1 1 795 -1.01 -0.004 ptsP b2829 "PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins)" Transport and binding proteins enzyme; Transport of small molecules: Other b2830 985 605 1.63 0.212 744 966 -1.30 -0.113 795 855 0.004691 0.005150 P12 1 1 1200 -1.10 -0.041 ygdP b2830 putative invasion protein Putative factors putative factor; Not classified b2831 458 252 1.00 0.000 565 356 1.13 0.053 355 461 0.002093 0.002773 O7 1 2 1568 -1.00 0.000 mutH b2831 methyl-directed mismatch repair "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2832 1563 1236 1.26 0.102 895 748 1.20 0.078 1399 821 0.008257 0.004944 P9 3 1 1000 1.67 0.223 b2832 b2832 putative transport protein Putative transport proteins putative transport; Not classified b2833 1598 2131 -1.33 -0.125 768 1146 -1.49 -0.174 1864 957 0.011000 0.005762 A4 4 3 3753 1.91 0.281 b2833 b2833 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2834 832 1001 -1.20 -0.080 281 639 -1.28 -0.107 916 460 0.005407 0.002769 C4 4 3 3754 1.80 0.256 b2834 b2834 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2835 1223 1152 1.06 0.026 815 734 1.11 0.046 1188 774 0.007007 0.004663 B14 1 1 1201 1.50 0.177 ygeD b2835 putative resistance proteins Putative factors orf; Drug/analog sensitivity b2836 8048 8162 -1.01 -0.006 4545 4472 1.02 0.007 8105 4508 0.047823 0.027143 M14 2 2 2071 1.76 0.246 aas b2836 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b2837 266 223 1.00 0.000 129 35 1.00 0.000 244 82 0.001442 0.000494 E19 1 1 75 1.00 0.000 galR b2837 repressor of galETK operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b2838 3886 3609 1.08 0.032 1948 2099 -1.08 -0.032 3748 2023 0.022114 0.012181 I2 1 2 1925 1.82 0.259 lysA b2838 diaminopimelate decarboxylase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b2839 1615 1589 1.02 0.007 1100 1065 1.03 0.014 1602 1083 0.009452 0.006518 K2 1 2 1926 1.45 0.161 lysR b2839 positive regulator for lys Regulatory function regulator; Amino acid biosynthesis: Lysine b2840 1084 1287 -1.19 -0.075 698 441 1.40 0.145 1186 570 0.006997 0.003430 D14 1 1 1202 2.04 0.310 ygeA b2840 putative resistance proteins Putative transport proteins putative transport; Drug/analog sensitivity b2841 1176 1234 -1.05 -0.021 710 721 -1.02 -0.007 1205 716 0.007110 0.004308 H7 1 1 796 1.65 0.218 araE b2841 low-affinity L-arabinose transport system proton symport protein Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2842 5189 4734 1.10 0.040 3383 4884 -1.44 -0.160 4961 4133 0.029275 0.024884 A2 4 2 2209 1.18 0.071 kduD b2842 2-deoxy-D-gluconate 3-dehydrogenase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2843 772 311 1.54 0.189 822 655 1.25 0.099 541 738 0.003194 0.004445 G19 1 1 76 -1.39 -0.143 kduI b2843 homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2844 652 856 -1.31 -0.118 289 594 -1.19 -0.075 754 442 0.004450 0.002660 O14 2 2 2072 1.48 0.171 yqeF b2844 putative acyltransferase Putative enzymes putative enzyme; Not classified b2845 4379 4249 1.03 0.013 5708 5437 1.05 0.021 4314 5573 0.025455 0.033550 B11 3 1 1001 -1.32 -0.120 b2845 b2845 putative transporter protein Putative transport proteins putative transport; Not classified b2846 -3 139 -1.00 0.000 81 136 -1.00 0.000 68 109 0.000401 0.000654 E4 4 3 3755 -1.00 0.000 yqeH b2846 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2847 297 196 1.00 0.000 434 312 1.00 0.000 247 373 0.001455 0.002246 A17 3 1 257 -1.00 0.000 yqeI b2847 putative sensory transducer Putative regulatory proteins putative transport; Not classified b2848 425 449 -1.00 0.000 142 127 1.00 0.000 437 134 0.002579 0.000809 G4 4 3 3756 1.00 0.000 yqeJ b2848 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2849 188 87 1.00 0.000 143 79 1.00 0.000 138 111 0.000811 0.000671 I4 4 3 3757 1.00 0.000 yqeK b2849 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2850 112 -4 1.00 0.000 61 87 -1.00 0.000 54 74 0.000321 0.000444 K4 4 3 3758 -1.00 0.000 ygeF b2850 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2851 60 -10 1.00 0.000 -29 139 -1.00 0.000 25 55 0.000148 0.000332 M4 4 3 3759 -1.00 0.000 ygeG b2851 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2852 4569 3425 1.33 0.125 3000 3238 -1.08 -0.033 3997 3119 0.023584 0.018778 C17 3 1 258 1.26 0.099 ygeH b2852 putative invasion protein Putative factors putative factor; Not classified b2853 180 203 -1.00 0.000 68 114 -1.00 0.000 191 91 0.001130 0.000549 O4 4 3 3760 1.00 0.000 b2853 b2853 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2854 355 802 -1.60 -0.205 464 766 -1.53 -0.185 578 615 0.003412 0.003701 A6 4 3 3761 -1.08 -0.035 b2854 b2854 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2855 99 -822 1.00 0.000 288 -612 1.00 0.000 -362 -162 -0.002134 -0.000975 E17 3 1 259 -1.00 0.000 ygeK b2855 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2856 290 366 -1.00 0.000 260 291 -1.00 0.000 328 275 0.001936 0.001658 C6 4 3 3762 1.00 0.000 b2856 b2856 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2857 180 142 1.00 0.000 61 65 -1.00 0.000 161 63 0.000951 0.000379 E6 4 3 3763 1.00 0.000 b2857 b2857 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2858 59 125 -1.00 0.000 -6 96 -1.00 0.000 92 45 0.000544 0.000270 G6 4 3 3764 1.00 0.000 b2858 b2858 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2859 508 484 1.02 0.007 621 618 1.01 0.002 496 619 0.002928 0.003728 I6 4 3 3765 -1.24 -0.094 b2859 b2859 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2860 1246 1087 1.15 0.059 642 894 -1.39 -0.144 1167 768 0.006883 0.004625 C23 4 1 378 1.49 0.173 yi22_4 b2860 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b2861 22834 25378 -1.11 -0.046 13778 15551 -1.13 -0.053 24106 14664 0.142242 0.088288 E23 4 1 379 1.61 0.207 yi21_4 b2861 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b2862 323 474 -1.00 0.000 -90 181 -1.00 0.000 398 45 0.002351 0.000273 K6 4 3 3766 1.00 0.000 b2862 b2862 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2863 282 407 -1.00 0.000 136 386 -1.00 0.000 344 261 0.002032 0.001571 M6 4 3 3767 1.00 0.000 b2863 b2863 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2865 6970 8453 -1.21 -0.084 3253 3980 -1.22 -0.088 7711 3616 0.045501 0.021773 O8 2 1 512 2.09 0.320 b2865 b2865 putative lipoprotein Putative cell structure putative structure; Not classified b2866 4066 3806 1.07 0.029 9088 9648 -1.06 -0.026 3936 9368 0.023224 0.056401 O6 4 3 3768 -2.43 -0.385 b2866 b2866 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2867 73565 73219 1.00 0.002 56954 58750 -1.03 -0.013 73392 57852 0.433064 0.348302 N9 3 2 2535 1.24 0.095 ygeT b2867 putative dehydrogenase Putative enzymes putative enzyme; Not classified b2868 1398 1078 1.30 0.113 702 651 1.08 0.032 1238 677 0.007304 0.004074 P9 3 2 2536 1.79 0.254 b2868 b2868 putative dehydrogenase Putative enzymes putative enzyme; Not classified b2869 3316 2928 1.13 0.054 1871 1594 1.17 0.070 3122 1732 0.018421 0.010430 B11 3 2 2537 1.77 0.247 ygeV b2869 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2870 464 655 -1.31 -0.118 530 618 -1.17 -0.067 560 574 0.003303 0.003454 A8 4 3 3769 -1.05 -0.019 ygeW b2870 putative carbamoyl transferase Putative enzymes putative enzyme; Not classified b2871 1233 926 1.33 0.124 1037 722 1.44 0.158 1079 879 0.006369 0.005295 D11 3 2 2538 1.20 0.080 ygeX b2871 putative dehydratase Putative enzymes putative enzyme; Not classified b2872 2043 2639 -1.29 -0.111 3349 2693 1.24 0.095 2341 3021 0.013813 0.018188 F11 3 2 2539 -1.32 -0.120 ygeY b2872 putative deacetylase Putative enzymes putative enzyme; Not classified b2873 793 927 -1.17 -0.068 652 930 -1.43 -0.155 860 791 0.005076 0.004761 C8 4 3 3770 1.07 0.028 b2873 b2873 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2874 3131 2650 1.18 0.072 1542 1325 1.16 0.066 2890 1433 0.017055 0.008628 H11 3 2 2540 1.98 0.296 yqeA b2874 putative kinase Putative enzymes putative enzyme; Not classified b2875 1924 1153 1.67 0.222 1111 1377 -1.24 -0.093 1539 1244 0.009078 0.007490 J11 3 2 2541 1.21 0.084 b2875 b2875 putative synthases Putative enzymes putative enzyme; Not classified b2876 1103 1038 1.06 0.026 664 1212 -1.83 -0.262 1070 938 0.006317 0.005647 E8 4 3 3771 1.12 0.049 b2876 b2876 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2877 423 492 -1.00 0.000 314 454 -1.00 0.000 457 384 0.002697 0.002315 G8 4 3 3772 1.00 0.000 ygfJ b2877 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2878 886 760 1.17 0.067 2304 2114 1.09 0.037 823 2209 0.004859 0.013298 L11 3 2 2542 -2.74 -0.437 b2878 b2878 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b2879 1317 1722 -1.31 -0.117 1896 1839 1.03 0.013 1520 1868 0.008967 0.011244 O10 3 1 616 -1.25 -0.098 b2879 b2879 putative proteoglycan Putative cell structure putative structure; Not classified b2880 5955 5412 1.10 0.042 4578 5639 -1.23 -0.091 5684 5109 0.033537 0.030758 I8 4 3 3773 1.09 0.038 b2880 b2880 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2881 1045 594 1.76 0.246 1485 1530 -1.03 -0.013 820 1508 0.004836 0.009076 N11 3 2 2543 -1.88 -0.273 b2881 b2881 putative dehydrogenase Putative enzymes putative enzyme; Not classified b2882 3318 2657 1.25 0.097 4053 3702 1.09 0.039 2987 3877 0.017628 0.023344 D11 3 1 1002 -1.32 -0.122 ygfO b2882 putative transport protein Putative transport proteins putative transport; Not classified b2883 752 593 1.27 0.103 614 566 1.09 0.036 673 590 0.003969 0.003551 K8 4 3 3774 1.12 0.048 ygfP b2883 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2884 414 516 -1.03 -0.014 379 428 -1.00 0.000 465 404 0.002744 0.002430 M8 4 3 3775 1.00 0.000 ygfQ b2884 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2885 2887 2630 1.10 0.040 3334 3404 -1.02 -0.009 2758 3369 0.016275 0.020285 P11 3 2 2544 -1.25 -0.096 ygfR b2885 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2886 6854 6988 -1.02 -0.008 5916 5973 -1.01 -0.004 6921 5945 0.040839 0.035789 N20 3 1 1423 1.14 0.057 ygfS b2886 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b2887 1978 1637 1.21 0.082 1521 1636 -1.08 -0.031 1807 1578 0.010664 0.009503 B13 3 2 2545 1.12 0.050 ygfT b2887 "putative oxidoreductase, Fe-S subunit" Putative enzymes putative enzyme; Not classified b2888 1429 848 1.69 0.227 1086 821 1.32 0.121 1138 954 0.006717 0.005742 F11 3 1 1003 1.17 0.068 ygfU b2888 putative permease Putative transport proteins putative transport; Not classified b2889 584 634 -1.08 -0.035 1997 2107 -1.05 -0.023 609 2052 0.003593 0.012355 D13 3 2 2546 -3.44 -0.536 b2889 b2889 putative enzyme Putative enzymes putative enzyme; Not classified b2890 4825 3427 1.41 0.149 7397 7896 -1.07 -0.028 4126 7647 0.024347 0.046036 I5 3 2 1749 -1.89 -0.277 lysS b2890 "lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b2891 5842 2956 1.98 0.296 13215 12882 1.03 0.011 4399 13049 0.025956 0.078562 K5 3 2 1750 -3.03 -0.481 prfB b2891 peptide chain release factor RF-2 "Translation, post-translational modification" factor; Proteins - translation and modification b2892 1257 1308 -1.04 -0.017 1944 1910 1.02 0.008 1282 1927 0.007567 0.011601 K3 2 2 1646 -1.53 -0.186 recJ b2892 "ssDNA exonuclease, 5' --> 3' specific" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2893 2612 2013 1.30 0.113 2899 2634 1.10 0.042 2312 2766 0.013645 0.016655 A10 2 1 513 -1.22 -0.087 dsbC b2893 protein disulfide isomerase II Cell structure enzyme; Surface structures b2894 880 840 1.05 0.020 876 852 1.03 0.012 860 864 0.005076 0.005202 A9 1 2 1569 -1.02 -0.011 xerD b2894 site-specific recombinase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2895 3139 2387 1.32 0.119 2829 2392 1.18 0.073 2763 2611 0.016301 0.015717 P20 3 1 1424 1.04 0.016 fldB b2895 flavodoxin 2 Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b2896 1041 1053 -1.01 -0.005 621 772 -1.24 -0.094 1047 697 0.006178 0.004193 O8 4 3 3776 1.47 0.168 b2896 b2896 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2897 449 311 1.00 0.000 630 830 -1.32 -0.119 380 730 0.002244 0.004396 A10 4 3 3777 -1.47 -0.166 ygfY b2897 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2898 1370 958 1.43 0.156 1298 1326 -1.02 -0.009 1164 1312 0.006869 0.007897 C10 4 3 3778 -1.15 -0.061 ygfZ b2898 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2899 1159 878 1.32 0.120 783 801 -1.02 -0.010 1018 792 0.006009 0.004770 F13 3 2 2547 1.26 0.100 b2899 b2899 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2900 709 558 1.27 0.104 482 674 -1.35 -0.130 633 578 0.003738 0.003480 E10 4 3 3779 1.07 0.031 yqfB b2900 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2901 7813 7983 -1.02 -0.009 9685 11043 -1.14 -0.057 7898 10364 0.046602 0.062399 I19 1 1 77 -1.34 -0.127 bglA b2901 6-phospho-beta-glucosidase A; cryptic Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2902 12405 12514 -1.01 -0.004 6107 6736 -1.10 -0.043 12459 6421 0.073519 0.038659 K19 1 1 78 1.90 0.279 ygfF b2902 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2903 7227 6804 1.06 0.026 8206 8345 -1.02 -0.007 7015 8275 0.041396 0.049823 C2 4 2 2210 -1.20 -0.080 gcvP b2903 "glycine decarboxylase, P protein of glycine cleavage system" Amino acid biosynthesis "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2904 966 1505 -1.56 -0.193 2343 2525 -1.08 -0.032 1236 2434 0.007290 0.014655 E2 4 2 2211 -2.01 -0.303 gcvH b2904 "in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor" Amino acid biosynthesis "carrier; Central intermediary metabolism: Pool, multipurpose conversions" b2905 4413 4404 1.00 0.001 2829 3282 -1.16 -0.064 4409 3056 0.026013 0.018396 G2 4 2 2212 1.41 0.150 gcvT b2905 aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system Amino acid biosynthesis "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2906 519 607 -1.17 -0.068 539 633 -1.17 -0.070 563 586 0.003324 0.003525 G10 4 3 3780 -1.06 -0.026 visC b2906 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2907 4083 2373 1.72 0.236 3138 2221 1.41 0.150 3228 2680 0.019046 0.016132 D11 1 2 2346 1.18 0.072 ubiH b2907 "2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b2908 2779 2352 1.18 0.073 2864 2598 1.10 0.042 2565 2731 0.015138 0.016441 M5 3 2 1751 -1.09 -0.036 pepP b2908 proline aminopeptidase P II Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b2909 1924 1834 1.05 0.021 2693 2593 1.04 0.016 1879 2643 0.011089 0.015912 I10 4 3 3781 -1.43 -0.157 ygfB b2909 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2910 2322 2349 -1.01 -0.005 1393 1371 1.02 0.007 2336 1382 0.013783 0.008321 K10 4 3 3782 1.66 0.219 ygfE b2910 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2912 1413 1078 1.31 0.118 544 520 1.05 0.020 1245 532 0.007348 0.003203 H13 3 2 2548 2.29 0.361 ygfA b2912 putative ligase Putative enzymes putative enzyme; Not classified b2913 15872 13475 1.18 0.071 3618 3078 1.18 0.070 14674 3348 0.086585 0.020157 M2 1 2 1927 4.30 0.633 serA b2913 D-3-phosphoglycerate dehydrogenase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Serine b2914 1448 1693 -1.17 -0.068 1652 1751 -1.06 -0.025 1570 1701 0.009266 0.010243 B22 3 1 1425 -1.11 -0.044 rpiA b2914 "ribosephosphate isomerase, constitutive" Central intermediary metabolism "enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b2915 7523 7089 1.06 0.026 9873 10020 -1.01 -0.006 7306 9946 0.043111 0.059882 M10 4 3 3783 -1.39 -0.143 yqfE b2915 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2916 2356 2499 -1.06 -0.026 1312 1780 -1.36 -0.133 2428 1546 0.014326 0.009307 C9 1 2 1570 1.54 0.187 iciA b2916 "replication initiation inhibitor, binds to 13-mers at oriC" Regulatory function "regulator; DNA - replication, repair, restriction/modification" b2917 14 230 -1.00 0.000 48 227 -1.00 0.000 122 137 0.000719 0.000827 A16 2 2 2073 -1.00 0.000 sbm b2917 methylmalonyl-CoA mutase (MCM) Fatty acid and phospholipid metabolism enzyme; Degradation of small molecules: Fatty acids b2918 1522 1166 1.31 0.116 691 503 1.38 0.138 1344 597 0.007929 0.003595 H11 3 1 1004 2.21 0.344 ygfD b2918 putative nucleotide-binding protein Putative transport proteins phenotype; Not classified b2919 534 671 -1.26 -0.099 516 469 1.03 0.014 602 493 0.003553 0.002966 J13 3 2 2549 1.18 0.073 ygfG b2919 putative enzyme Putative enzymes putative enzyme; Not classified b2920 998 463 2.00 0.300 578 351 1.16 0.063 731 464 0.004311 0.002796 L13 3 2 2550 1.44 0.157 ygfH b2920 putative coenzyme A transferase Putative enzymes putative enzyme; Not classified b2921 1241 1159 1.07 0.030 760 826 -1.09 -0.036 1200 793 0.007080 0.004773 G17 3 1 260 1.48 0.171 ygfI b2921 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b2922 3174 1600 1.98 0.297 991 748 1.33 0.122 2387 869 0.014084 0.005234 A12 3 1 617 2.69 0.430 yggE b2922 putative actin "Hypothetical, unclassified, unknown" phenotype; Not classified b2923 641 631 1.02 0.007 647 437 1.29 0.112 636 542 0.003755 0.003263 O10 4 3 3784 1.15 0.061 yggA b2923 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2924 7781 7416 1.05 0.021 1526 1380 1.11 0.044 7599 1453 0.044839 0.008748 J11 3 1 1005 5.13 0.710 yggB b2924 putative transport protein Putative transport proteins putative transport; Not classified b2925 4316 2951 1.46 0.165 5571 5164 1.08 0.033 3633 5367 0.021439 0.032314 D22 3 1 1426 -1.51 -0.178 fba b2925 "fructose-bisphosphate aldolase, class II" Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b2926 6179 5732 1.08 0.033 9668 9412 1.03 0.012 5956 9540 0.035142 0.057439 F22 3 1 1427 -1.63 -0.213 pgk b2926 phosphoglycerate kinase Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b2927 33844 42296 -1.25 -0.097 29159 27126 1.07 0.031 38070 28142 0.224639 0.169433 I2 4 2 2213 1.33 0.122 epd b2927 D-erythrose 4-phosphate dehydrogenase Central intermediary metabolism enzyme; Central intermediary metabolism b2928 6066 5518 1.10 0.041 9751 10287 -1.06 -0.023 5792 10019 0.034177 0.060321 A12 4 3 3785 -1.76 -0.247 yggC b2928 putative kinase Putative enzymes putative enzyme; Not classified b2929 642 708 -1.10 -0.042 577 586 -1.01 -0.006 675 582 0.003982 0.003503 I17 3 1 261 1.14 0.056 yggD b2929 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b2930 195 209 -1.00 0.000 375 370 1.00 0.000 202 373 0.001192 0.002244 C12 4 3 3786 -1.00 0.000 yggF b2930 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2931 22494 21820 1.03 0.013 5794 5493 1.05 0.023 22157 5644 0.130740 0.033979 N13 3 2 2551 3.85 0.585 b2931 b2931 putative oxidoreductase Putative enzymes putative enzyme; Not classified b2932 722 543 1.33 0.124 733 656 1.12 0.048 633 694 0.003734 0.004180 E12 4 3 3787 -1.12 -0.049 yggP b2932 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2933 1368 1324 1.03 0.014 539 390 1.08 0.033 1346 465 0.007944 0.002797 J7 1 1 797 2.65 0.423 cmtA b2933 "PTS system, mannitol-specific enzyme II component, cryptic" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2934 11122 10015 1.11 0.046 6197 5815 1.07 0.028 10569 6006 0.062362 0.036160 L7 1 1 798 1.72 0.237 cmtB b2934 "PTS system, mannitol-specific enzyme II component, cryptic" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2935 40380 37199 1.09 0.036 36944 34227 1.08 0.033 38790 35586 0.228886 0.214245 H22 3 1 1428 1.07 0.029 tktA b2935 transketolase 1 isozyme Central intermediary metabolism "enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b2936 2983 2807 1.06 0.026 1939 1937 1.00 0.000 2895 1938 0.017081 0.011669 G12 4 3 3788 1.46 0.165 yggG b2936 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2937 99391 88709 1.12 0.049 64783 64880 -1.00 -0.001 94050 64831 0.554961 0.390319 K2 4 2 2214 1.42 0.153 speB b2937 agmatinase Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b2938 11749 9294 1.26 0.102 8285 8596 -1.04 -0.016 10521 8441 0.062084 0.050818 M2 4 2 2215 1.22 0.087 speA b2938 biosynthetic arginine decarboxylase Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b2939 316 215 1.00 0.000 292 205 1.00 0.000 266 248 0.001568 0.001495 I12 4 3 3789 1.00 0.000 yqgB b2939 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2940 550 602 -1.09 -0.039 934 785 1.19 0.076 576 859 0.003399 0.005174 K12 4 3 3790 -1.52 -0.183 yqgC b2940 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2941 1216 1257 -1.03 -0.014 969 863 1.12 0.050 1236 916 0.007296 0.005516 M12 4 3 3791 1.32 0.121 yqgD b2941 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2942 21716 22760 -1.05 -0.020 12390 12547 -1.01 -0.005 22238 12469 0.131218 0.075068 O2 4 2 2216 1.75 0.243 metK b2942 "methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2943 1290 1257 1.03 0.011 725 612 1.19 0.074 1273 668 0.007513 0.004024 N7 1 1 799 1.87 0.271 galP b2943 galactose-proton symport of transport system Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b2944 663 621 1.07 0.028 807 616 1.31 0.117 642 711 0.003789 0.004283 O12 4 3 3792 -1.13 -0.053 sprT b2944 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2945 61590 57752 1.07 0.028 51963 54202 -1.04 -0.018 59671 53082 0.352102 0.319586 M3 2 2 1647 1.10 0.042 endA b2945 DNA-specific endonuclease I "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b2946 480 726 -1.45 -0.162 549 680 -1.24 -0.093 603 615 0.003558 0.003700 A14 4 3 3793 -1.04 -0.017 yggJ b2946 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2947 1051 1147 -1.09 -0.038 950 1287 -1.36 -0.132 1099 1119 0.006486 0.006734 F11 1 2 2347 -1.04 -0.016 gshB b2947 glutathione synthetase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b2948 1329 1262 1.05 0.023 1025 1066 -1.04 -0.017 1295 1045 0.007643 0.006293 C14 4 3 3794 1.21 0.084 yqgE b2948 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2949 754 641 1.18 0.070 457 514 -1.03 -0.012 698 486 0.004118 0.002923 E14 4 3 3795 1.37 0.138 yqgF b2949 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2950 11324 10202 1.11 0.045 3604 3729 -1.03 -0.015 10763 3667 0.063511 0.022075 L11 3 1 1006 2.88 0.459 yggR b2950 putative protein transport Putative transport proteins putative transport; Not classified b2951 289 511 -1.02 -0.009 450 653 -1.31 -0.116 400 551 0.002359 0.003319 G14 4 3 3796 -1.11 -0.044 yggS b2951 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2952 2327 2780 -1.19 -0.077 1529 1605 -1.05 -0.021 2554 1567 0.015068 0.009434 N11 3 1 1007 1.60 0.203 yggT b2952 putative resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b2953 250 395 -1.00 0.000 256 501 -1.00 -0.001 322 378 0.001901 0.002278 I14 4 3 3797 -1.00 0.000 yggU b2953 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2954 1394 773 1.80 0.256 1358 736 1.84 0.266 1084 1047 0.006394 0.006305 C12 3 1 618 1.01 0.006 yggV b2954 putative ribosomal protein Putative cell structure putative structure; Not classified b2955 1454 1647 -1.13 -0.054 1743 1486 1.17 0.069 1551 1615 0.009151 0.009720 H11 1 2 2348 -1.06 -0.026 yggW b2955 putative oxidase Putative enzymes putative enzyme; Not classified b2956 12983 12367 1.05 0.021 6556 6388 1.03 0.011 12675 6472 0.074791 0.038965 E12 3 1 619 1.92 0.283 yggM b2956 putative alpha helix chain "Hypothetical, unclassified, unknown" phenotype; Not classified b2957 1425 1051 1.36 0.132 995 991 1.00 0.001 1238 993 0.007305 0.005979 O2 1 2 1928 1.22 0.087 ansB b2957 periplasmic L-asparaginase II Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b2958 362 386 -1.00 0.000 408 710 -1.42 -0.152 374 559 0.002206 0.003364 K14 4 3 3798 -1.12 -0.050 yggN b2958 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2959 3091 3734 -1.21 -0.082 2521 2738 -1.09 -0.036 3412 2630 0.020136 0.015833 M14 4 3 3799 1.27 0.104 yggL b2959 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2960 2171 2044 1.06 0.026 1783 1969 -1.10 -0.043 2108 1876 0.012437 0.011295 O14 4 3 3800 1.10 0.042 yggH b2960 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2961 851 648 1.31 0.119 1029 1249 -1.21 -0.084 749 1139 0.004422 0.006857 E9 1 2 1571 -1.55 -0.191 mutY b2961 adenine glycosylase; G.C --> T.A transversions "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b2962 614 619 -1.01 -0.004 351 332 1.00 0.000 616 341 0.003636 0.002056 A16 4 3 3801 1.21 0.084 yggX b2962 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2963 1004 651 1.54 0.188 668 800 -1.20 -0.078 828 734 0.004883 0.004419 C16 4 3 3802 1.11 0.043 mltC b2963 membrane-bound lytic murein transglycosylase C Cell processes "putative enzyme; Murein sacculus, peptidoglycan" b2964 21080 20825 1.01 0.005 7012 7732 -1.10 -0.042 20952 7372 0.123634 0.044382 P7 1 1 800 2.79 0.445 nupG b2964 "transport of nucleosides, permease protein" Transport and binding proteins "transport; Transport of small molecules: Nucleosides, purines, pyrimidines" b2965 479 848 -1.70 -0.229 444 601 -1.20 -0.080 663 523 0.003913 0.003146 A4 4 2 2217 1.24 0.095 speC b2965 ornithine decarboxylase isozyme Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b2966 2722 3178 -1.17 -0.067 1785 1557 1.15 0.059 2950 1671 0.017406 0.010063 P11 3 1 1008 1.73 0.238 yqgA b2966 putative transport protein Putative transport proteins putative transport; Not classified b2968 50525 47746 1.06 0.025 38286 37486 1.02 0.009 49135 37886 0.289933 0.228095 B9 1 1 801 1.27 0.104 yghD b2968 putative secretion pathway protein Putative transport proteins putative transport; Not classified b2969 1267 1530 -1.21 -0.082 683 1039 -1.52 -0.182 1399 861 0.008252 0.005185 E16 4 3 3803 1.59 0.202 yghE b2969 putative general secretion pathway for protein export (GSP) Putative transport proteins putative transport; Not classified b2970 502 355 1.00 0.002 537 489 1.07 0.031 429 513 0.002528 0.003089 D9 1 1 802 -1.03 -0.013 b2970 b2970 putative general secretion pathway for protein export (GSP) Putative transport proteins putative transport; Not classified b2971 661 676 -1.02 -0.010 286 471 -1.00 0.000 668 378 0.003943 0.002277 G16 4 3 3804 1.31 0.119 b2971 b2971 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2972 319 307 1.00 0.000 455 458 -1.00 0.000 313 457 0.001847 0.002750 P13 3 2 2552 -1.00 0.000 b2972 b2972 putative peptidase Putative enzymes putative enzyme; Not classified b2973 762 981 -1.29 -0.110 1365 1636 -1.20 -0.079 872 1501 0.005143 0.009035 I16 4 3 3805 -1.76 -0.245 b2973 b2973 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2974 2672 2011 1.33 0.123 2371 2290 1.04 0.015 2342 2330 0.013819 0.014029 B15 3 2 2553 -1.02 -0.007 b2974 b2974 putative endoglucanase Putative cell structure putative structure; Not classified b2975 5535 5496 1.01 0.003 4027 4404 -1.09 -0.039 5516 4215 0.032547 0.025378 B13 3 1 1009 1.28 0.108 yghK b2975 putative permease Putative transport proteins putative transport; Not classified b2976 980 932 1.05 0.022 671 535 1.26 0.099 956 603 0.005642 0.003631 C4 4 2 2218 1.55 0.191 glcB b2976 malate synthase G Central intermediary metabolism enzyme; Central intermediary metabolism: Glyoxylate bypass b2977 5065 4785 1.06 0.025 2611 2692 -1.03 -0.013 4925 2652 0.029061 0.015965 M19 1 1 79 1.82 0.260 glcG b2977 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2978 1628 1467 1.11 0.045 1606 1233 1.30 0.115 1547 1419 0.009129 0.008545 D15 3 2 2554 1.07 0.029 glcF b2978 glycolate oxidase iron-sulfur subunit Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b2979 1766 2124 -1.20 -0.080 2503 2286 1.09 0.039 1945 2395 0.011479 0.014416 O19 1 1 80 -1.26 -0.099 glcD b2979 glycolate oxidase subunit D Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b2980 6956 6822 1.02 0.008 5347 5257 1.02 0.007 6889 5302 0.040651 0.031921 A21 1 1 81 1.27 0.105 glcC b2980 transcriptional activator for glc operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b2981 428 502 -1.00 -0.001 379 577 -1.15 -0.062 465 478 0.002744 0.002877 K16 4 3 3806 -1.00 0.000 b2981 b2981 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2982 4631 4305 1.08 0.032 7001 7432 -1.06 -0.026 4468 7216 0.026364 0.043446 G23 4 1 380 -1.65 -0.217 trs5_9 b2982 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b2983 315 338 -1.00 0.000 212 258 -1.00 0.000 326 235 0.001926 0.001415 M16 4 3 3807 1.00 0.000 yghQ b2983 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2984 846 1063 -1.26 -0.100 841 1243 -1.48 -0.170 954 1042 0.005632 0.006275 O16 4 3 3808 -1.11 -0.047 yghR b2984 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2985 306 333 -1.00 0.000 156 201 -1.00 0.000 319 178 0.001882 0.001073 A18 4 3 3809 1.00 0.000 yghS b2985 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2986 706 1284 -1.82 -0.259 1805 1872 -1.04 -0.016 995 1838 0.005871 0.011066 C18 4 3 3810 -1.88 -0.275 yghT b2986 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2987 283 135 1.00 0.000 175 147 1.00 0.000 209 161 0.001233 0.000969 F9 1 1 803 1.00 0.000 pitB b2987 low-affinity phosphate transport Transport and binding proteins transport; Transport of small molecules: Anions b2988 2209 2002 1.10 0.043 1173 1005 1.17 0.067 2105 1089 0.012424 0.006557 E4 4 2 2219 1.89 0.278 gsp b2988 glutathionylspermidine synthetase/amidase Central intermediary metabolism enzyme; Central intermediary metabolism: Polyamine biosynthesis b2989 10845 10915 -1.01 -0.003 6953 8116 -1.17 -0.067 10880 7534 0.064200 0.045361 E18 4 3 3811 1.42 0.151 b2989 b2989 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2990 415 443 -1.00 0.000 61 -31 1.00 0.000 429 15 0.002530 0.000091 J22 3 1 1429 1.00 0.000 hybG b2990 hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2 Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b2991 202 138 1.00 0.000 78 239 -1.00 0.000 170 158 0.001002 0.000953 L22 3 1 1430 1.00 0.000 hybF b2991 may modulate levels of hydrogenease-2 Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b2992 2226 745 2.99 0.475 3159 3046 1.04 0.016 1485 3102 0.008765 0.018678 N22 3 1 1431 -2.13 -0.329 hybE b2992 member of hyb operon Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b2993 30780 28780 1.07 0.029 21494 21133 1.02 0.007 29780 21313 0.175720 0.128317 P22 3 1 1432 1.37 0.137 hybD b2993 probable processing element for hydrogenase-2 Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b2994 906 851 1.06 0.027 787 745 1.06 0.024 879 766 0.005184 0.004609 B24 3 1 1433 1.12 0.051 hybC b2994 "probable large subunit, hydrogenase-2" Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b2995 3909 2942 1.33 0.123 3710 3173 1.17 0.068 3426 3441 0.020214 0.020720 D24 3 1 1434 -1.03 -0.011 hybB b2995 probable cytochrome Ni/Fe component of hydrogenase-2 Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b2996 6072 5298 1.15 0.059 4994 4278 1.17 0.067 5685 4636 0.033545 0.027910 F24 3 1 1435 1.20 0.080 hybA b2996 hydrogenase-2 small subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b2997 5091 4880 1.04 0.018 4262 3660 1.16 0.066 4985 3961 0.029417 0.023846 F15 3 2 2555 1.23 0.091 b2997 b2997 putative hydrogenase subunit Putative enzymes putative enzyme; Not classified b2998 4014 3929 1.02 0.009 4138 3791 1.09 0.038 3972 3964 0.023435 0.023867 G18 4 3 3812 -1.02 -0.008 b2998 b2998 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b2999 389 435 -1.00 0.000 372 508 -1.02 -0.007 412 440 0.002431 0.002650 I18 4 3 3813 -1.00 0.000 b2999 b2999 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3000 598 744 -1.24 -0.095 212 297 -1.00 0.000 671 254 0.003959 0.001532 K18 4 3 3814 1.32 0.120 b3000 b3000 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3001 1261 1062 1.19 0.075 3200 3718 -1.16 -0.065 1162 3459 0.006854 0.020824 H15 3 2 2556 -3.04 -0.483 b3001 b3001 putative reductase Putative enzymes putative enzyme; Not classified b3002 1771 2153 -1.22 -0.085 5029 5153 -1.02 -0.011 1962 5091 0.011579 0.030650 M18 4 3 3815 -2.65 -0.423 yqhA b3002 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3003 9301 9224 1.01 0.004 6057 5771 1.05 0.021 9263 5914 0.054656 0.035605 J15 3 2 2557 1.54 0.186 yghA b3003 putative oxidoreductase Putative enzymes putative enzyme; Not classified b3004 1966 1930 1.02 0.008 545 644 -1.18 -0.072 1948 595 0.011495 0.003580 O18 4 3 3816 3.21 0.507 b3004 b3004 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3005 8570 6866 1.25 0.096 2551 2863 -1.12 -0.050 7718 2707 0.045543 0.016296 H9 1 1 804 2.79 0.446 exbD b3005 uptake of enterochelin; tonB-dependent uptake of B colicins Transport and binding proteins transport; Transport of small molecules: Cations b3006 15814 14392 1.10 0.041 4426 4852 -1.10 -0.040 15103 4639 0.089118 0.027932 J9 1 1 805 3.19 0.504 exbB b3006 uptake of enterochelin; tonB-dependent uptake of B colicins Transport and binding proteins transport; Transport of small molecules: Cations b3007 58 181 -1.00 0.000 131 109 1.00 0.000 120 120 0.000707 0.000722 A20 4 3 3817 -1.00 0.000 b3007 b3007 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3008 2321 2390 -1.03 -0.013 1235 1354 -1.10 -0.040 2356 1294 0.013901 0.007793 A4 1 2 1929 1.78 0.251 metC b3008 cystathionine beta-lyase (beta-cystathionase) Amino acid biosynthesis enzyme; Amino acid biosynthesis: Methionine b3009 777 786 -1.01 -0.005 700 818 -1.17 -0.068 781 759 0.004610 0.004569 C20 4 3 3818 1.01 0.004 yghB b3009 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3010 36029 37896 -1.05 -0.022 19477 19698 -1.01 -0.005 36963 19588 0.218106 0.117928 L15 3 2 2558 1.85 0.267 yqhC b3010 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b3011 1134 1024 1.11 0.044 718 619 1.16 0.065 1079 669 0.006366 0.004025 N15 3 2 2559 1.58 0.199 yqhD b3011 putative oxidoreductase Putative enzymes putative enzyme; Not classified b3012 2950 1818 1.62 0.210 3121 3485 -1.12 -0.048 2384 3303 0.014065 0.019886 E20 4 3 3819 -1.41 -0.150 yqhE b3012 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3013 1603 1732 -1.08 -0.034 1249 1129 1.11 0.044 1667 1189 0.009838 0.007158 G20 4 3 3820 1.37 0.138 yqhG b3013 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3014 70 54 1.00 0.000 130 109 1.00 0.000 62 119 0.000367 0.000718 I20 4 3 3821 -1.00 0.000 yqhH b3014 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3015 517 465 1.03 0.014 729 885 -1.21 -0.084 491 807 0.002896 0.004860 K20 4 3 3822 -1.62 -0.209 b3015 b3015 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3016 1063 1051 1.01 0.005 2027 2088 -1.03 -0.013 1057 2058 0.006237 0.012389 M20 4 3 3823 -1.99 -0.298 ygiR b3016 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3017 1590 1683 -1.06 -0.025 1549 1368 1.13 0.054 1636 1458 0.009656 0.008779 F14 1 1 1203 1.10 0.041 sufI b3017 suppressor of ftsI Cell processes phenotype; Not classified b3018 4296 4603 -1.07 -0.030 2982 3721 -1.25 -0.096 4450 3352 0.026256 0.020180 C16 2 2 2074 1.30 0.114 plsC b3018 1-acyl-sn-glycerol-3-phosphate acyltransferase Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b3019 21550 16484 1.31 0.116 12526 12450 1.01 0.003 19017 12488 0.112212 0.075184 G9 1 2 1572 1.49 0.174 parC b3019 DNA topoisomerase IV subunit A "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3020 1148 1188 -1.04 -0.015 2654 2286 1.16 0.065 1168 2470 0.006892 0.014870 O5 3 2 1752 -2.16 -0.334 b3020 b3020 putative transport periplasmic protein Putative transport proteins putative transport; Not classified b3021 1183 1353 -1.14 -0.058 1260 1233 1.02 0.010 1268 1247 0.007484 0.007505 O20 4 3 3824 -1.00 -0.001 b3021 b3021 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3022 1106 928 1.19 0.076 546 588 -1.08 -0.033 1017 567 0.006001 0.003414 A22 4 3 3825 1.76 0.245 b3022 b3022 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3023 482 396 1.00 0.000 319 135 1.00 0.000 439 227 0.002588 0.001368 C22 4 3 3826 1.00 0.000 b3023 b3023 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3024 1859 1909 -1.03 -0.011 799 715 1.12 0.048 1884 757 0.011118 0.004556 E22 4 3 3827 2.44 0.387 ygiW b3024 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3025 432 350 1.00 0.000 199 239 -1.00 0.000 391 219 0.002305 0.001320 K17 3 1 262 1.00 0.000 ygiX b3025 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3026 107795 93905 1.15 0.060 90442 83406 1.08 0.035 100850 86924 0.595086 0.523332 M17 3 1 263 1.14 0.056 ygiY b3026 putative 2-component sensor protein Putative regulatory proteins putative regulator; Not classified b3027 1775 1596 1.11 0.046 810 1021 -1.26 -0.101 1685 916 0.009944 0.005512 G22 4 3 3828 1.80 0.256 b3027 b3027 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3028 3621 3500 1.03 0.015 1227 1827 -1.49 -0.173 3561 1527 0.021012 0.009192 F15 4 2 2651 2.29 0.359 mdaB b3028 modulator of drug activity B Cell processes phenotype; Not classified b3029 1331 1519 -1.14 -0.057 834 992 -1.19 -0.075 1425 913 0.008409 0.005497 I22 4 3 3829 1.53 0.185 ygiN b3029 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3030 3029 3049 -1.01 -0.003 3010 2997 1.00 0.002 3039 3004 0.017933 0.018083 I9 1 2 1573 -1.01 -0.004 parE b3030 DNA topoisomerase IV subunit B "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3031 272 506 -1.01 -0.005 724 669 1.08 0.034 389 696 0.002296 0.004193 K22 4 3 3830 -1.40 -0.145 yqiA b3031 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3032 4152 3247 1.28 0.107 2922 2907 1.01 0.002 3699 2915 0.021829 0.017547 C21 1 1 82 1.24 0.095 icc b3032 regulator of lacZ Regulatory function regulator; Degradation of small molecules: Carbon compounds b3033 1149 908 1.27 0.102 649 609 1.07 0.028 1028 629 0.006068 0.003784 P15 3 2 2560 1.60 0.205 yqiB b3033 putative enzyme Putative enzymes putative enzyme; Not classified b3034 5003 5053 -1.01 -0.004 3895 4204 -1.08 -0.033 5028 4049 0.029669 0.024379 M22 4 3 3831 1.22 0.085 yqiE b3034 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3035 3747 3630 1.03 0.014 3084 2852 1.08 0.034 3688 2968 0.021763 0.017869 H14 1 1 1204 1.22 0.086 tolC b3035 outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes Cell processes putative membrane; Cell division b3036 1055 661 1.60 0.203 1430 1345 1.06 0.027 858 1388 0.005062 0.008355 O22 4 3 3832 -1.65 -0.218 ygiA b3036 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3037 1293 1259 1.03 0.012 1119 1430 -1.28 -0.106 1276 1274 0.007531 0.007673 P10 2 3 3833 -1.02 -0.008 ygiB b3037 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3038 694 299 1.39 0.143 701 695 1.01 0.004 496 698 0.002929 0.004201 B17 3 2 2561 -1.40 -0.146 ygiC b3038 putative synthetase/amidase Putative enzymes putative enzyme; Not classified b3039 1426 1642 -1.15 -0.061 793 1003 -1.26 -0.102 1534 898 0.009051 0.005407 C24 4 3 3834 1.67 0.224 ygiD b3039 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3040 3288 3741 -1.14 -0.056 1639 2068 -1.26 -0.101 3514 1854 0.020736 0.011160 E24 4 3 3835 1.86 0.269 ygiE b3040 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3041 1430 1774 -1.24 -0.093 1718 2030 -1.18 -0.072 1602 1874 0.009453 0.011281 J11 1 2 2349 -1.19 -0.077 ribB b3041 "3,4 dihydroxy-2-butanone-4-phosphate synthase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Riboflavin" b3042 955 821 1.16 0.065 818 1051 -1.28 -0.109 888 934 0.005240 0.005626 G24 4 3 3836 -1.07 -0.031 b3042 b3042 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3043 5 163 -1.00 0.000 -9 190 -1.00 0.000 84 91 0.000497 0.000545 C10 2 1 514 -1.00 0.000 ygiL b3043 putative fimbrial-like protein Putative cell structure putative structure; Not classified b3044 18132 25256 -1.39 -0.144 16019 15978 1.00 0.001 21694 15998 0.128011 0.096319 I23 4 1 381 1.33 0.124 yi21_5 b3044 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3045 1107 1261 -1.14 -0.056 1303 961 1.36 0.132 1184 1132 0.006986 0.006815 K23 4 1 382 1.03 0.011 yi22_5 b3045 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3046 604 380 1.21 0.082 374 351 1.00 0.000 492 363 0.002905 0.002184 E10 2 1 515 1.00 0.000 yqiG b3046 putative membrane protein putative membrane protein putative membrane; Not classified b3047 1907 2185 -1.15 -0.059 1263 1373 -1.09 -0.036 2046 1318 0.012074 0.007935 G10 2 1 516 1.52 0.182 yqiH b3047 putative membrane protein putative membrane protein putative membrane; Not classified b3048 238 153 1.00 0.000 62 145 -1.00 0.000 196 104 0.001154 0.000625 I24 4 3 3837 1.00 0.000 yqiI b3048 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3049 4850 4446 1.09 0.038 761 705 1.08 0.033 4648 733 0.027428 0.004411 I10 2 1 517 6.22 0.794 glgS b3049 "glycogen biosynthesis, rpoS dependent" Cell processes "putative enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)" b3050 366 53 1.00 0.000 167 257 -1.00 0.000 209 212 0.001236 0.001276 D17 3 2 2562 -1.00 0.000 b3050 b3050 putative oxidoreductase Putative enzymes putative enzyme; Not classified b3051 4810 3220 1.49 0.174 2289 1903 1.20 0.080 4015 2096 0.023693 0.012618 G12 3 1 620 1.88 0.274 b3051 b3051 putative membrane protein putative membrane protein putative membrane; Not classified b3052 2056 1519 1.35 0.131 1818 1739 1.05 0.019 1787 1778 0.010547 0.010707 F17 3 2 2563 -1.02 -0.007 b3052 b3052 putative kinase Putative enzymes putative enzyme; Not classified b3053 227 712 -1.42 -0.153 -52 -572 1.00 0.000 469 -312 0.002769 -0.001880 A7 3 2 1753 1.00 0.000 glnE b3053 adenylylating enzyme for glutamine synthetase "Translation, post-translational modification" enzyme; Proteins - translation and modification b3054 1430 1463 -1.02 -0.010 844 1006 -1.19 -0.076 1446 925 0.008535 0.005568 K24 4 3 3838 1.53 0.185 ygiF b3054 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3055 2393 3305 -1.38 -0.140 2930 2944 -1.00 -0.002 2849 2937 0.016810 0.017682 M24 4 3 3839 -1.05 -0.022 ygiM b3055 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3056 1287 1492 -1.16 -0.064 1988 2070 -1.04 -0.017 1389 2029 0.008198 0.012216 C7 3 2 1754 -1.49 -0.173 cca b3056 tRNA nucleotidyl transferase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3057 2162 1891 1.14 0.058 1279 1323 -1.04 -0.015 2027 1301 0.011959 0.007833 J14 1 1 1205 1.53 0.184 bacA b3057 bacitracin resistance; possibly phosphorylates undecaprenol Putative transport proteins putative transport; Drug/analog sensitivity b3058 1049 1399 -1.33 -0.125 963 1940 -2.01 -0.304 1224 1451 0.007223 0.008738 O24 4 3 3840 -1.21 -0.083 ygiG b3058 putative kinase Putative enzymes putative enzyme; Not classified b3059 11093 8610 1.29 0.110 9837 8960 1.10 0.041 9852 9398 0.058131 0.056583 B1 1 3 3841 1.03 0.012 ygiH b3059 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3060 4730 4244 1.11 0.047 2170 2260 -1.04 -0.018 4487 2215 0.026478 0.013334 O17 3 1 264 1.99 0.298 ygiP b3060 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b3061 1297 1115 1.16 0.066 1305 1277 1.02 0.009 1206 1291 0.007116 0.007773 H24 3 1 1436 -1.09 -0.038 ttdA b3061 "L-tartrate dehydratase, subunit A" Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b3062 760 511 1.49 0.172 1011 872 1.16 0.064 635 942 0.003748 0.005670 J24 3 1 1437 -1.51 -0.180 ttdB b3062 "L-tartrate dehydratase, subunit B" Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b3063 3643 3181 1.15 0.059 3870 3930 -1.02 -0.007 3412 3900 0.020134 0.023480 D1 1 3 3842 -1.17 -0.067 ygjE b3063 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3064 962 824 1.17 0.067 1727 1201 1.44 0.158 893 1464 0.005268 0.008812 E7 3 2 1755 -1.67 -0.223 ygjD b3064 putative O-sialoglycoprotein endopeptidase Putative enzymes putative enzyme; Not classified b3065 4195 3962 1.06 0.025 10427 10385 1.00 0.002 4079 10406 0.024066 0.062651 G7 3 2 1756 -2.60 -0.416 rpsU b3065 30S ribosomal subunit protein S21 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3066 2247 1983 1.13 0.054 3440 3015 1.14 0.057 2115 3227 0.012480 0.019431 K9 1 2 1574 -1.56 -0.192 dnaG b3066 DNA biosynthesis; DNA primase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3067 6820 6854 -1.01 -0.002 12359 11590 1.07 0.028 6837 11975 0.040343 0.072095 O3 2 2 1648 -1.79 -0.252 rpoD b3067 "RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures" Regulatory function factor; Global regulatory functions b3068 4113 4196 -1.02 -0.009 3126 2648 1.18 0.072 4154 2887 0.024513 0.017383 F1 1 3 3843 1.41 0.149 ygjF b3068 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3070 5318 5159 1.03 0.013 3602 3396 1.06 0.026 5239 3499 0.030912 0.021067 H1 1 3 3844 1.47 0.167 yqjH b3070 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3071 27563 28132 -1.02 -0.009 47718 45251 1.05 0.023 27847 46484 0.164319 0.279862 J1 1 3 3845 -1.70 -0.231 yqjI b3071 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3072 3992 3816 1.05 0.020 4045 3938 1.03 0.012 3904 3991 0.023037 0.024030 L14 1 1 1206 -1.04 -0.018 aer b3072 "aerotaxis sensor receptor, flavoprotein" Regulatory function regulator; Degradation of small molecules: Carbon compounds b3073 5355 4707 1.14 0.056 1275 1077 1.18 0.073 5031 1176 0.029686 0.007078 H17 3 2 2564 4.19 0.623 ygjG b3073 probable ornithine aminotransferase Amino acid biosynthesis putative enzyme; Amino acid biosynthesis: Arginine b3074 4304 2373 1.81 0.259 6010 4245 1.42 0.151 3339 5127 0.019701 0.030870 I7 3 2 1757 -1.57 -0.195 ygjH b3074 putative tRNA synthetase Putative enzymes putative enzyme; Not classified b3075 3984 3617 1.10 0.042 5462 5129 1.06 0.027 3800 5296 0.022426 0.031883 E21 1 1 83 -1.42 -0.153 ebgR b3075 regulator of ebg operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b3076 343 192 1.00 0.000 315 374 -1.00 0.000 267 345 0.001577 0.002076 G21 1 1 84 -1.00 0.000 ebgA b3076 "evolved beta-D-galactosidase, alpha subunit; cryptic gene" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3077 546 576 -1.06 -0.023 531 507 1.05 0.021 561 519 0.003311 0.003126 I21 1 1 85 1.06 0.025 ebgC b3077 "evolved beta-D-galactosidase, beta subunit; cryptic gene" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3078 4553 2285 1.99 0.299 2724 2722 1.00 0.000 3419 2723 0.020174 0.016392 J17 3 2 2565 1.23 0.090 ygjI b3078 putative oxidoreductase "Hypothetical, unclassified, unknown" orf; Not classified b3079 5810 5201 1.12 0.048 9762 10108 -1.04 -0.015 5505 9935 0.032486 0.059813 L1 1 3 3846 -1.84 -0.265 ygjJ b3079 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3080 544365 504725 1.08 0.033 1193282 1257360 -1.05 -0.023 524545 1225321 3.095184 7.377117 N1 1 3 3847 -2.38 -0.377 ygjK b3080 putative isomerase Putative enzymes putative enzyme; Not classified b3081 1896 2365 -1.25 -0.096 1886 1511 1.25 0.096 2131 1698 0.012573 0.010225 L17 3 2 2566 1.23 0.090 ygjL b3081 putative NADPH dehydrogenase "Hypothetical, unclassified, unknown" orf; Not classified b3082 8929 6438 1.39 0.142 17956 17812 1.01 0.004 7684 17884 0.045340 0.107671 B12 2 3 3848 -2.37 -0.376 ygjM b3082 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3083 725 621 1.17 0.067 408 346 1.00 0.000 673 377 0.003971 0.002272 B3 1 3 3849 1.32 0.122 ygjN b3083 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3084 2617 2192 1.19 0.077 3356 3138 1.07 0.029 2404 3247 0.014188 0.019549 D3 1 3 3850 -1.38 -0.139 ygjO b3084 putative enzyme Putative enzymes putative enzyme; Not classified b3085 611 747 -1.22 -0.087 1240 1235 1.00 0.002 679 1238 0.004006 0.007452 F3 1 3 3851 -1.86 -0.270 ygjP b3085 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3086 4000 4078 -1.02 -0.008 4258 4544 -1.07 -0.028 4039 4401 0.023833 0.026494 H3 1 3 3852 -1.11 -0.046 ygjQ b3086 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3087 2722 2617 1.04 0.017 2173 2149 1.01 0.005 2670 2161 0.015754 0.013010 J3 1 3 3853 1.21 0.083 ygjR b3087 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3088 3588 3350 1.07 0.030 1420 1704 -1.20 -0.079 3469 1562 0.020470 0.009404 L3 1 3 3854 2.18 0.338 ygjT b3088 putative transport protein Putative transport proteins putative transport; Not classified b3089 3289 2702 1.22 0.085 6064 4208 1.44 0.159 2995 5136 0.017675 0.030920 D13 3 1 1010 -1.75 -0.243 ygjU b3089 putative transport protein Putative transport proteins putative transport; Not classified b3090 5279 4651 1.14 0.055 6221 6297 -1.01 -0.005 4965 6259 0.029297 0.037685 N3 1 3 3855 -1.29 -0.109 ygjV b3090 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3091 2775 1955 1.42 0.152 2906 2674 1.09 0.036 2365 2790 0.013956 0.016797 K21 1 1 86 -1.20 -0.080 uxaA b3091 altronate hydrolase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3092 1554 974 1.59 0.203 1074 1247 -1.16 -0.065 1264 1161 0.007460 0.006988 M21 1 1 87 1.07 0.028 uxaC b3092 uronate isomerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3093 3195 2546 1.26 0.099 1898 1817 1.04 0.019 2870 1858 0.016937 0.011185 L9 1 1 806 1.51 0.180 exuT b3093 transport of hexuronates Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3094 1101 935 1.18 0.071 933 775 1.20 0.081 1018 854 0.006009 0.005142 O21 1 1 88 1.17 0.068 exuR b3094 "negative regulator of exu regulon, exuT, uxaAC, and uxuB" Regulatory function regulator; Degradation of small molecules: Carbon compounds b3095 2230 1652 1.35 0.130 1209 1331 -1.10 -0.042 1941 1270 0.011454 0.007648 P3 1 3 3856 1.50 0.175 yqjA b3095 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3096 765 735 1.04 0.017 456 569 -1.14 -0.056 750 512 0.004426 0.003084 B5 1 3 3857 1.44 0.157 yqjB b3096 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3097 5928 4464 1.33 0.123 3563 3568 -1.00 -0.001 5196 3565 0.030659 0.021464 D5 1 3 3858 1.43 0.155 yqjC b3097 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3098 2567 1869 1.37 0.138 436 344 1.00 0.000 2218 390 0.013088 0.002348 F5 1 3 3859 4.36 0.640 yqjD b3098 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3099 21993 13514 1.63 0.211 15124 15033 1.01 0.003 17753 15078 0.104757 0.090779 H5 1 3 3860 1.15 0.062 yqjE b3099 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3100 1833 1447 1.27 0.103 1409 1355 1.04 0.017 1640 1382 0.009676 0.008319 J5 1 3 3861 1.16 0.066 b3100 b3100 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3101 1321 904 1.46 0.164 1664 1455 1.14 0.058 1113 1559 0.006565 0.009388 L5 1 3 3862 -1.43 -0.155 yqjF b3101 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3102 1117 984 1.14 0.055 900 792 1.14 0.055 1050 846 0.006198 0.005094 N17 3 2 2567 1.22 0.085 yqjG b3102 putative transferase Putative enzymes putative enzyme; Not classified b3103 571 659 -1.15 -0.062 433 510 -1.02 -0.009 615 472 0.003630 0.002841 L24 3 1 1438 1.21 0.083 yhaH b3103 putative cytochrome Putative enzymes putative carrier; Not classified b3104 199 112 1.00 0.000 53 132 -1.00 0.000 156 92 0.000918 0.000557 N24 3 1 1439 1.00 0.000 yhaI b3104 putative cytochrome Putative enzymes putative carrier; Not classified b3105 1287 1064 1.21 0.082 1104 1126 -1.02 -0.009 1175 1115 0.006935 0.006712 A19 3 1 265 1.03 0.014 yhaJ b3105 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b3106 761 828 -1.09 -0.036 555 612 -1.10 -0.042 795 583 0.004689 0.003511 N5 1 3 3863 1.34 0.126 yhaK b3106 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3107 4556 4692 -1.03 -0.013 2550 2623 -1.03 -0.012 4624 2587 0.027286 0.015573 P5 1 3 3864 1.75 0.244 yhaL b3107 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3108 277 245 1.00 0.000 273 296 -1.00 0.000 261 285 0.001538 0.001715 B7 1 3 3865 -1.00 0.000 yhaM b3108 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3109 198 409 -1.00 0.000 223 152 1.00 0.000 303 187 0.001790 0.001127 D7 1 3 3866 1.00 0.000 yhaN b3109 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3110 1852 2165 -1.17 -0.068 1838 2377 -1.29 -0.112 2009 2108 0.011853 0.012689 C19 3 1 266 -1.07 -0.030 yhaO b3110 putative transport system permease protein Putative transport proteins putative transport; Not classified b3111 1801 1309 1.38 0.139 3049 2669 1.14 0.058 1555 2859 0.009173 0.017214 F7 1 3 3867 -1.88 -0.273 yhaP b3111 putative L-serine dehydratase Putative enzymes putative enzyme; Not classified b3112 901 828 1.09 0.036 731 731 1.00 0.000 864 731 0.005101 0.004402 H7 1 3 3868 1.16 0.064 yhaQ b3112 putative L-serine dehydratase Putative enzymes putative enzyme; Not classified b3113 608 629 -1.03 -0.014 755 683 1.10 0.043 618 719 0.003650 0.004328 J7 1 3 3869 -1.19 -0.074 yhaR b3113 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3114 1618 1442 1.12 0.050 1243 1145 1.09 0.036 1530 1194 0.009028 0.007189 L7 1 3 3870 1.26 0.099 tdcE b3114 probable formate acetyltransferase 3 Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b3115 1204 1130 1.07 0.027 1921 1996 -1.04 -0.017 1167 1959 0.006885 0.011794 N4 2 3 1440 -1.71 -0.234 tdcD b3115 putative kinase Putative enzymes putative enzyme; Not classified b3116 449 262 1.00 0.000 143 170 -1.00 0.000 355 157 0.002097 0.000943 N9 1 1 807 1.00 0.000 tdcC b3116 "anaerobically inducible L-threonine, L-serine permease" Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3117 238 309 -1.00 0.000 401 357 1.00 0.000 274 379 0.001615 0.002284 C4 1 2 1930 -1.00 0.000 tdcB b3117 "threonine dehydratase, catabolic" Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b3118 552 225 1.10 0.043 177 195 -1.00 0.000 388 186 0.002291 0.001120 E4 1 2 1931 1.00 0.000 tdcA b3118 transcriptional activator of tdc operon Regulatory function regulator; Degradation of small molecules: Amino acids b3119 103 83 1.00 0.000 -18 31 -1.00 0.000 93 6 0.000550 0.000037 G4 1 2 1932 1.00 0.000 tdcR b3119 threonine dehydratase operon activator protein Regulatory function regulator; Degradation of small molecules: Amino acids b3120 130 129 1.00 0.000 94 86 1.00 0.000 129 90 0.000764 0.000544 N7 1 3 3871 1.00 0.000 yhaB b3120 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3121 685 719 -1.05 -0.021 769 926 -1.21 -0.081 702 848 0.004142 0.005103 P7 1 3 3872 -1.23 -0.091 yhaC b3121 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3122 119 222 -1.00 0.000 192 254 -1.00 0.000 170 223 0.001006 0.001341 B9 1 3 3873 -1.00 0.000 b3122 b3122 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3124 1967 1360 1.45 0.160 1694 1750 -1.03 -0.014 1664 1722 0.009818 0.010367 D9 1 3 3874 -1.06 -0.024 yhaD b3124 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3125 1207 1015 1.19 0.075 792 900 -1.14 -0.056 1111 846 0.006554 0.005094 P17 3 2 2568 1.29 0.109 yhaE b3125 putative dehydrogenase Putative enzymes putative enzyme; Not classified b3126 116 192 -1.00 0.000 120 92 1.00 0.000 154 106 0.000909 0.000638 F9 1 3 3875 1.00 0.000 yhaF b3126 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3127 16912 15598 1.08 0.035 12953 12965 -1.00 0.000 16255 12959 0.095917 0.078018 A23 1 1 89 1.23 0.090 yhaU b3127 putative transport protein Putative transport proteins putative transport; Not classified b3128 1762 1914 -1.09 -0.036 2362 2235 1.06 0.024 1838 2298 0.010846 0.013836 B19 3 2 2569 -1.28 -0.106 yhaG b3128 putative hydrolase Putative enzymes putative enzyme; Not classified b3129 3172 3653 -1.15 -0.061 4154 3975 1.04 0.019 3412 4064 0.020135 0.024470 K7 3 2 1758 -1.22 -0.085 sohA b3129 putative protease; htrA suppressor protein Putative enzymes putative enzyme; Not classified b3130 7638 9120 -1.19 -0.077 8082 7995 1.01 0.005 8379 8038 0.049442 0.048395 H9 1 3 3876 1.02 0.009 yhaV b3130 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3131 4890 4728 1.03 0.015 2372 2893 -1.22 -0.086 4809 2633 0.028377 0.015850 G4 4 2 2220 1.79 0.253 agaR b3131 putative DEOR-type transcriptional regulator of aga operon Putative regulatory proteins putative regulator; Not classified b3132 9733 9173 1.06 0.026 7798 7553 1.03 0.014 9453 7675 0.055778 0.046209 C23 1 1 90 1.21 0.082 agaZ b3132 putative tagatose 6-phosphate kinase 2 Putative enzymes putative enzyme; Not classified b3133 2825 2679 1.05 0.023 1906 1808 1.05 0.023 2752 1857 0.016238 0.011181 I4 4 2 2221 1.45 0.162 agaV b3133 "PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)" Transport and binding proteins enzyme; Central intermediary metabolism: Amino sugars b3134 5936 5269 1.13 0.052 5058 4818 1.05 0.021 5602 4938 0.033058 0.029728 K4 4 2 2222 1.11 0.046 agaW b3134 PTS system N-acetylgalactosameine-specific IIC component 2 Transport and binding proteins enzyme; Central intermediary metabolism: Amino sugars b3135 537 439 1.07 0.031 603 295 1.21 0.081 488 449 0.002879 0.002703 M4 4 2 2223 1.00 0.000 agaA b3135 putative N-acetylgalactosamine-6-phosphate deacetylase Putative enzymes putative enzyme; Not classified b3136 4649 4071 1.14 0.058 1196 1379 -1.15 -0.062 4360 1288 0.025729 0.007754 O4 4 2 2224 3.32 0.521 agaS b3136 putative tagatose-6-phosphate aldose/ketose isomerase Putative enzymes putative enzyme; Not classified b3137 598 839 -1.40 -0.147 680 914 -1.34 -0.128 719 797 0.004241 0.004799 A6 4 2 2225 -1.13 -0.054 agaY b3137 tagatose-bisphosphate aldolase 2 Putative enzymes "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3138 496 545 -1.09 -0.038 252 436 -1.00 0.000 521 344 0.003072 0.002069 C6 4 2 2226 1.02 0.010 agaB b3138 "PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA)" Transport and binding proteins enzyme; Central intermediary metabolism: Amino sugars b3139 3644 4564 -1.25 -0.098 1558 1889 -1.21 -0.084 4104 1723 0.024215 0.010375 E6 4 2 2227 2.33 0.368 agaC b3139 PTS system N-acetylgalactosamine-specific IIC component 1 Transport and binding proteins enzyme; Central intermediary metabolism: Amino sugars b3140 2590 2917 -1.13 -0.052 1341 1797 -1.34 -0.127 2754 1569 0.016248 0.009445 G6 4 2 2228 1.72 0.236 agaD b3140 "PTS system, N-acetylglucosamine enzyme IID component 1" Transport and binding proteins enzyme; Central intermediary metabolism: Amino sugars b3141 2105 2890 -1.37 -0.138 1348 1560 -1.16 -0.063 2497 1454 0.014736 0.008753 I6 4 2 2229 1.68 0.226 agaI b3141 putative galactosamine-6-phosphate isomerase Putative enzymes putative enzyme; Not classified b3142 -85 328 -1.00 0.000 -5 292 -1.00 0.000 122 144 0.000718 0.000865 K10 2 1 518 -1.00 0.000 yraH b3142 putative fimbrial-like protein Putative cell structure putative structure; Not classified b3143 342 191 1.00 0.000 89 159 -1.00 0.000 266 124 0.001572 0.000747 L2 2 1 1254 1.00 0.000 yraI b3143 putative chaperone Putative factors putative factor; Not classified b3144 705 741 -1.05 -0.022 336 441 -1.00 0.000 723 389 0.004268 0.002340 M10 2 1 519 1.42 0.153 yraJ b3144 putative outer membrane protein putative membrane protein putative membrane; Not classified b3145 60 46 1.00 0.000 16 146 -1.00 0.000 53 81 0.000314 0.000487 O10 2 1 520 -1.00 0.000 yraK b3145 putative fimbrial protein "Hypothetical, unclassified, unknown" orf; Not classified b3146 5130 5097 1.01 0.003 3840 4169 -1.09 -0.036 5114 4004 0.030174 0.024109 J9 1 3 3877 1.25 0.097 yraL b3146 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3147 14003 13618 1.03 0.012 4618 4874 -1.06 -0.023 13810 4746 0.081491 0.028575 B2 4 1 1441 2.85 0.455 yraM b3147 putative glycosylase Putative enzymes putative enzyme; Not classified b3148 432 370 1.00 0.000 365 428 -1.00 0.000 401 396 0.002367 0.002386 L9 1 3 3878 -1.00 0.000 yraN b3148 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3149 823 732 1.12 0.050 705 836 -1.19 -0.074 777 771 0.004587 0.004640 N9 1 3 3879 -1.01 -0.005 yraO b3149 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3150 548 667 -1.22 -0.086 485 470 1.00 0.000 607 477 0.003583 0.002874 N14 1 1 1207 1.19 0.077 yraP b3150 putative periplasmic protein Putative transport proteins putative transport; Not classified b3151 4675 3999 1.17 0.068 9174 8610 1.07 0.028 4337 8892 0.025593 0.053533 P9 1 3 3880 -2.09 -0.320 yraQ b3151 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3152 168 108 1.00 0.000 423 395 1.00 0.000 138 409 0.000816 0.002463 B11 1 3 3881 -1.00 0.000 yraR b3152 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3153 1511 1219 1.24 0.093 2265 1984 1.14 0.058 1365 2124 0.008054 0.012790 D11 1 3 3882 -1.59 -0.201 yhbO b3153 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3154 7883 8381 -1.06 -0.027 8980 10629 -1.18 -0.073 8132 9805 0.047983 0.059029 F11 1 3 3883 -1.23 -0.090 yhbP b3154 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3155 758 982 -1.30 -0.113 746 799 -1.07 -0.030 870 772 0.005133 0.004651 H11 1 3 3884 1.10 0.043 yhbQ b3155 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3156 596 512 1.16 0.066 505 580 -1.15 -0.060 554 543 0.003268 0.003267 J11 1 3 3885 1.00 0.000 yhbS b3156 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3157 1082 1107 -1.02 -0.010 950 1147 -1.21 -0.081 1094 1049 0.006457 0.006313 L11 1 3 3886 1.02 0.010 yhbT b3157 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3158 500 272 1.00 0.000 1420 1489 -1.05 -0.021 386 1455 0.002278 0.008757 M7 3 2 1759 -2.92 -0.465 yhbU b3158 putative collagenase "Hypothetical, unclassified, unknown" orf; Not classified b3159 1479 1359 1.09 0.037 1040 1059 -1.02 -0.008 1419 1050 0.008372 0.006319 N11 1 3 3887 1.32 0.122 yhbV b3159 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3160 874 974 -1.11 -0.047 548 526 1.04 0.018 924 537 0.005451 0.003233 D19 3 2 2570 1.69 0.227 yhbW b3160 putative enzyme Putative enzymes putative enzyme; Not classified b3161 347 326 1.00 0.000 201 295 -1.00 0.000 337 248 0.001987 0.001492 P9 1 1 808 1.00 0.000 mtr b3161 tryptophan-specific transport protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3162 10683 10602 1.01 0.003 22354 23551 -1.05 -0.023 10642 22952 0.062798 0.138186 A5 2 2 1649 -2.20 -0.343 deaD b3162 inducible ATP-independent RNA helicase "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b3163 2379 2380 -1.00 0.000 2603 2808 -1.08 -0.033 2379 2706 0.014039 0.016291 E19 3 1 267 -1.16 -0.065 yhbM b3163 putative control proteins Putative regulatory proteins putative regulator; Not classified b3164 20506 20578 -1.00 -0.002 22234 21980 1.01 0.005 20542 22107 0.121212 0.133096 C5 2 2 1650 -1.10 -0.041 pnp b3164 polynucleotide phosphorylase; cytidylate kinase activity "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b3165 4702 4003 1.17 0.070 11793 12852 -1.09 -0.037 4352 12322 0.025682 0.074188 O7 3 2 1760 -2.89 -0.461 rpsO b3165 30S ribosomal subunit protein S15 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3166 6384 5934 1.08 0.032 5744 5442 1.06 0.023 6159 5593 0.036343 0.033672 A9 3 2 1761 1.08 0.033 truB b3166 tRNA pseudouridine 5S synthase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3167 28267 20085 1.41 0.148 13743 12752 1.08 0.033 24176 13248 0.142654 0.079758 C9 3 2 1762 1.79 0.253 rbfA b3167 ribosome-binding factor A "Translation, post-translational modification" factor; Proteins - translation and modification b3168 5062 4291 1.18 0.072 13215 13414 -1.02 -0.007 4677 13314 0.027595 0.080159 E9 3 2 1763 -2.90 -0.463 infB b3168 protein chain initiation factor IF-2 "Translation, post-translational modification" factor; Proteins - translation and modification b3169 6385 6130 1.04 0.018 10900 11378 -1.04 -0.019 6258 11139 0.036924 0.067062 E5 2 2 1651 -1.82 -0.259 nusA b3169 transcription pausing; L factor "Transcription, RNA processing and degradation" "factor; RNA synthesis, modification, DNA transcription" b3170 1355 1409 -1.04 -0.017 3871 3913 -1.01 -0.005 1382 3892 0.008155 0.023430 P11 1 3 3888 -2.87 -0.458 yhbC b3170 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3172 3806 2294 1.66 0.220 1437 1508 -1.05 -0.021 3050 1472 0.017996 0.008865 I4 1 2 1933 2.03 0.307 argG b3172 argininosuccinate synthetase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b3173 2462 1872 1.32 0.119 2409 2049 1.18 0.070 2167 2229 0.012786 0.013420 F19 3 2 2571 -1.05 -0.021 yhbX b3173 putative alkaline phosphatase I Putative enzymes putative enzyme; Not classified b3175 9874 10187 -1.03 -0.014 13935 13288 1.05 0.021 10030 13611 0.059186 0.081949 B11 1 1 809 -1.38 -0.141 secG b3175 protein export - membrane protein Transport and binding proteins "transport; Protein, peptide secretion" b3176 8650 11111 -1.28 -0.109 13157 12476 1.05 0.023 9881 12816 0.058303 0.077162 K6 4 2 2230 -1.32 -0.122 mrsA b3176 similar to phosphoglucomutases and phosphomannomutases Putative enzymes putative enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism b3177 1129 809 1.40 0.145 1166 1112 1.05 0.021 969 1139 0.005716 0.006856 L11 1 2 2350 -1.20 -0.079 folP b3177 "7,8-dihydropteroate synthase" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b3178 12292 12366 -1.01 -0.003 7122 7338 -1.03 -0.013 12329 7230 0.072750 0.043529 P14 1 1 1208 1.67 0.223 hflB b3178 "degrades sigma32, integral membrane peptidase, cell division protein" Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b3179 2098 2335 -1.11 -0.046 1807 1719 1.05 0.022 2217 1763 0.013079 0.010613 B16 1 1 1209 1.23 0.091 ftsJ b3179 cell division protein Cell processes phenotype; Cell division b3180 603 464 1.21 0.082 1490 1648 -1.11 -0.044 534 1569 0.003149 0.009446 B13 1 3 3889 -3.00 -0.477 yhbY b3180 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3181 932 906 1.03 0.012 1386 1064 1.30 0.115 919 1225 0.005425 0.007376 G9 3 2 1764 -1.36 -0.133 greA b3181 transcription elongation factor: cleaves 3' nucleotide of paused mRNA Regulatory function regulator; Proteins - translation and modification b3182 11383 12147 -1.07 -0.028 10832 10581 1.02 0.010 11765 10707 0.069425 0.064461 A12 2 1 521 1.08 0.032 dacB b3182 "D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4" Cell structure "enzyme; Murein sacculus, peptidoglycan" b3183 4277 5263 -1.23 -0.090 3145 3546 -1.13 -0.052 4770 3346 0.028148 0.020143 H15 4 2 2652 1.40 0.145 yhbZ b3183 putative GTP-binding factor Putative factors putative factor; Not classified b3184 1589 2371 -1.49 -0.174 2336 2620 -1.12 -0.050 1980 2478 0.011684 0.014920 D13 1 3 3890 -1.28 -0.106 yhbE b3184 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3185 3125 1764 1.77 0.248 6819 7054 -1.03 -0.015 2444 6936 0.014423 0.041760 I9 3 2 1765 -2.90 -0.462 rpmA b3185 50S ribosomal subunit protein L27 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3186 7067 5612 1.26 0.100 22555 24145 -1.07 -0.030 6340 23350 0.037409 0.140581 K9 3 2 1766 -3.76 -0.575 rplU b3186 50S ribosomal subunit protein L21 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3187 1531 1434 1.07 0.029 1619 1854 -1.15 -0.059 1483 1736 0.008748 0.010453 N11 1 2 2351 -1.19 -0.077 ispB b3187 octaprenyl diphosphate synthase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b3188 1066 719 1.48 0.171 854 657 1.30 0.114 893 755 0.005269 0.004548 E23 1 1 91 1.16 0.064 nlp b3188 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu Regulatory function regulator; Degradation of small molecules: Carbon compounds b3189 2670 3229 -1.21 -0.083 5032 5080 -1.01 -0.004 2949 5056 0.017404 0.030438 C12 2 1 522 -1.75 -0.243 murA b3189 first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase Cell structure "enzyme; Murein sacculus, peptidoglycan" b3190 916 767 1.19 0.077 1351 1198 1.13 0.052 842 1275 0.004966 0.007674 F13 1 3 3891 -1.55 -0.189 yrbA b3190 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3191 337 346 -1.00 0.000 526 387 1.05 0.022 341 456 0.002013 0.002748 H13 1 3 3892 -1.00 0.000 yrbB b3191 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3192 809 236 1.62 0.209 669 601 1.11 0.047 522 635 0.003083 0.003823 J13 1 3 3893 -1.24 -0.094 yrbC b3192 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3193 892 611 1.46 0.164 1338 1332 1.00 0.002 751 1335 0.004434 0.008038 L13 1 3 3894 -1.81 -0.258 yrbD b3193 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3194 933 628 1.48 0.171 1573 1568 1.00 0.001 780 1570 0.004605 0.009453 N13 1 3 3895 -2.05 -0.312 yrbE b3194 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3195 1265 1126 1.12 0.050 1456 971 1.50 0.176 1195 1213 0.007053 0.007305 F13 3 1 1011 -1.04 -0.015 yrbF b3195 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b3196 564 620 -1.10 -0.041 1158 1043 1.11 0.045 592 1100 0.003493 0.006625 P13 1 3 3896 -1.90 -0.278 yrbG b3196 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3197 2308 1542 1.50 0.175 1606 1649 -1.03 -0.011 1925 1628 0.011361 0.009800 H19 3 2 2572 1.16 0.064 yrbH b3197 putative isomerase Putative enzymes putative enzyme; Not classified b3198 1586 1236 1.28 0.108 1332 1224 1.09 0.037 1411 1278 0.008326 0.007694 B15 1 3 3897 1.08 0.034 yrbI b3198 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3199 481 610 -1.22 -0.086 1011 787 1.28 0.109 546 899 0.003219 0.005413 D15 1 3 3898 -1.68 -0.226 yrbK b3199 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3200 3030 4390 -1.45 -0.161 2473 2106 1.17 0.070 3710 2289 0.021892 0.013783 F15 1 3 3899 1.59 0.201 yhbN b3200 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3201 962 1194 -1.24 -0.094 622 675 -1.08 -0.035 1078 649 0.006361 0.003906 H13 3 1 1012 1.63 0.212 yhbG b3201 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b3202 1348 1524 -1.13 -0.053 603 564 1.07 0.029 1436 583 0.008474 0.003512 E15 2 1 155 2.41 0.382 rpoN b3202 "RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation" Regulatory function regulator; Global regulatory functions b3203 2734 2535 1.08 0.033 686 620 1.11 0.044 2634 653 0.015544 0.003930 H15 1 3 3900 3.95 0.597 yhbH b3203 probable sigma-54 modulation protein Putative regulatory proteins putative regulator; Global regulatory functions b3204 104835 100485 1.04 0.018 102988 104785 -1.02 -0.008 102660 103886 0.605765 0.625454 D11 1 1 810 -1.03 -0.014 ptsN b3204 "phosphotransferase system enzyme IIA, regulates N metabolism" Transport and binding proteins "enzyme; Transport of small molecules: Amino acids, amines" b3205 1611 1762 -1.09 -0.039 1674 1580 1.06 0.025 1686 1627 0.009951 0.009797 J15 1 3 3901 1.02 0.007 yhbJ b3205 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3206 5252 5121 1.03 0.011 2829 2637 1.07 0.031 5186 2733 0.030603 0.016456 F11 1 1 811 1.86 0.269 ptsO b3206 "phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr" Transport and binding proteins transport; Transport of small molecules: Other b3207 997 949 1.05 0.021 818 852 -1.04 -0.018 973 835 0.005741 0.005027 L15 1 3 3902 1.14 0.058 yrbL b3207 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3208 1831 2142 -1.17 -0.068 876 1134 -1.29 -0.112 1986 1005 0.011722 0.006050 E12 2 1 523 1.94 0.287 mtgA b3208 putative peptidoglycan enzyme Putative enzymes putative enzyme; Not classified b3209 1567 2086 -1.33 -0.124 2724 3205 -1.18 -0.071 1827 2964 0.010779 0.017847 N15 1 3 3903 -1.66 -0.219 yhbL b3209 sigma cross-reacting protein 27A (SCRP-27A) Putative factors putative factor; Not classified b3210 157 375 -1.00 0.000 14 426 -1.00 0.000 266 220 0.001571 0.001325 G15 2 1 156 1.00 0.000 arcB b3210 "aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA" Regulatory function enzyme; Global regulatory functions b3211 948 659 1.44 0.158 551 499 1.10 0.042 804 525 0.004744 0.003163 P15 1 3 3904 1.50 0.176 yhcC b3211 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3212 1378 1668 -1.21 -0.083 684 717 -1.05 -0.021 1523 701 0.008987 0.004218 M6 4 2 2231 2.13 0.329 gltB b3212 "glutamate synthase, large subunit" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3213 15879 17924 -1.13 -0.053 2131 2151 -1.01 -0.004 16901 2141 0.099731 0.012892 O6 4 2 2232 7.74 0.889 gltD b3213 "glutamate synthase, small subunit" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3214 987 977 1.01 0.004 980 712 1.38 0.139 982 846 0.005797 0.005092 A8 4 2 2233 1.14 0.056 gltF b3214 "regulator of gltBDF operon, induction of Ntr enzymes" Regulatory function "regulator; Central intermediary metabolism: Pool, multipurpose conversions" b3215 520 408 1.04 0.017 120 305 -1.00 0.000 464 213 0.002740 0.001280 N2 2 1 1255 1.00 0.000 yhcA b3215 putative chaperone Putative factors putative factor; Not classified b3216 4107 3342 1.23 0.090 2312 2167 1.07 0.028 3724 2240 0.021977 0.013484 B17 1 3 3905 1.63 0.212 yhcD b3216 putative outer membrane protein putative membrane protein putative membrane; Not classified b3217 330 418 -1.00 0.000 260 159 1.00 0.000 374 210 0.002205 0.001263 D17 1 3 3906 1.00 0.000 yhcE b3217 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3218 2456 1812 1.36 0.132 3832 4316 -1.13 -0.052 2134 4074 0.012594 0.024529 M23 4 1 383 -1.95 -0.290 trs5_10 b3218 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3219 679 673 1.01 0.003 474 427 1.00 0.000 676 451 0.003988 0.002713 F17 1 3 3907 1.33 0.124 yhcF b3219 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3220 784 1095 -1.40 -0.145 462 799 -1.60 -0.203 939 631 0.005543 0.003797 H17 1 3 3908 1.46 0.164 yhcG b3220 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3221 387 592 -1.18 -0.074 104 89 1.00 0.000 490 97 0.002890 0.000583 J17 1 3 3909 1.00 0.000 yhcH b3221 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3222 621 540 1.15 0.061 480 277 1.00 0.000 581 379 0.003425 0.002282 J19 3 2 2573 1.14 0.058 yhcI b3222 putative NAGC-like transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3223 4181 3914 1.07 0.029 2597 2445 1.06 0.026 4048 2521 0.023884 0.015180 L19 3 2 2574 1.57 0.197 yhcJ b3223 putative enzyme Putative enzymes putative enzyme; Not classified b3224 3120 4917 -1.58 -0.198 6425 7360 -1.15 -0.059 4018 6893 0.023710 0.041497 G12 2 1 524 -1.75 -0.243 nanT b3224 sialic acid transporter Transport and binding proteins "transport; Murein sacculus, peptidoglycan" b3225 2486 2261 1.10 0.041 500 721 -1.44 -0.159 2373 610 0.014005 0.003673 I12 2 1 525 3.81 0.581 nanA b3225 N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12? Carbon compound catabolism enzyme; Surface polysaccharides & antigens b3226 654 417 1.31 0.117 711 702 1.01 0.006 536 707 0.003160 0.004254 G19 3 1 268 -1.35 -0.129 yhcK b3226 putative FADA-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3227 1104 917 1.20 0.081 808 713 1.13 0.054 1010 760 0.005962 0.004577 J13 3 1 1013 1.30 0.115 yhcL b3227 putative transport protein Putative transport proteins putative transport; Not classified b3228 1889 1667 1.13 0.054 1729 1493 1.16 0.064 1778 1611 0.010492 0.009700 I15 2 1 157 1.08 0.034 sspB b3228 stringent starvation protein B Regulatory function regulator; Global regulatory functions b3229 5103 5145 -1.01 -0.004 3305 3262 1.01 0.006 5124 3284 0.030235 0.019769 K15 2 1 158 1.53 0.185 sspA b3229 regulator of transcription; stringent starvation protein A Regulatory function regulator; Global regulatory functions b3230 8438 8179 1.03 0.014 25895 26010 -1.00 -0.002 8308 25952 0.049026 0.156246 M9 3 2 1767 -3.19 -0.503 rpsI b3230 30S ribosomal subunit protein S9 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3231 3470 3030 1.15 0.059 12813 12742 1.01 0.002 3250 12778 0.019175 0.076929 O9 3 2 1768 -4.01 -0.603 rplM b3231 50S ribosomal subunit protein L13 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3232 1608 2003 -1.25 -0.096 2443 2765 -1.13 -0.054 1806 2604 0.010654 0.015677 L17 1 3 3910 -1.47 -0.168 yhcM b3232 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3233 2504 1731 1.45 0.160 1752 2107 -1.20 -0.080 2117 1929 0.012493 0.011614 N17 1 3 3911 1.08 0.032 yhcB b3233 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3234 2019 912 2.21 0.345 1328 1452 -1.09 -0.039 1466 1390 0.008648 0.008368 A11 3 2 1769 1.03 0.014 degQ b3234 serine endoprotease Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b3235 2036 1096 1.86 0.269 1278 1558 -1.22 -0.086 1566 1418 0.009241 0.008536 C11 3 2 1770 1.08 0.035 degS b3235 protease Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b3236 14836 15475 -1.04 -0.018 3310 4382 -1.32 -0.122 15156 3846 0.089429 0.023153 D2 4 1 1442 3.86 0.587 mdh b3236 malate dehydrogenase Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b3237 711 377 1.42 0.153 1071 845 1.27 0.103 544 958 0.003210 0.005767 K4 1 2 1934 -1.80 -0.254 argR b3237 repressor of arg regulon; cer-mediated site specific recombination Regulatory function regulator; Amino acid biosynthesis: Arginine b3238 1715 1590 1.08 0.033 1555 1460 1.07 0.027 1652 1507 0.009749 0.009075 P17 1 3 3912 1.07 0.031 yhcN b3238 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3239 484 733 -1.47 -0.166 137 133 1.00 0.000 609 135 0.003591 0.000813 B19 1 3 3913 1.20 0.078 yhcO b3239 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3240 714 629 1.14 0.055 665 689 -1.04 -0.016 672 677 0.003963 0.004078 D19 1 3 3914 -1.03 -0.012 yhcP b3240 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3241 633 385 1.27 0.102 709 537 1.32 0.120 509 623 0.003004 0.003749 N19 3 2 2575 -1.25 -0.096 yhcQ b3241 putative membrane protein putative membrane protein putative membrane; Not classified b3242 84 -25 1.00 0.000 91 155 -1.00 0.000 29 123 0.000172 0.000741 F19 1 3 3915 -1.00 0.000 yhcR b3242 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3243 22542 16949 1.33 0.124 16650 17610 -1.06 -0.024 19745 17130 0.116512 0.103132 I19 3 1 269 1.13 0.053 yhcS b3243 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b3244 1142 1549 -1.36 -0.133 1949 2073 -1.06 -0.027 1345 2011 0.007939 0.012106 H19 1 3 3916 -1.52 -0.183 tldD b3244 suppresses inhibitory activity of CsrA Putative regulatory proteins phenotype; Not classified b3245 1757 1833 -1.04 -0.018 1294 1554 -1.20 -0.079 1795 1424 0.010591 0.008573 J19 1 3 3917 1.24 0.092 yhdP b3245 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3246 2089 1599 1.31 0.116 1340 1187 1.13 0.053 1844 1263 0.010879 0.007606 L19 1 3 3918 1.43 0.155 yhdR b3246 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3247 1724 2198 -1.28 -0.106 1315 1206 1.09 0.038 1961 1261 0.011571 0.007591 D16 1 1 1210 1.52 0.183 cafA b3247 bundles of cytoplasmic filaments Cell processes structural component; Cell division b3248 2047 1637 1.25 0.097 2296 2140 1.07 0.030 1842 2218 0.010870 0.013353 N19 1 3 3919 -1.23 -0.089 yhdE b3248 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3249 563 641 -1.14 -0.056 415 502 -1.00 -0.001 602 458 0.003555 0.002759 K12 2 1 526 1.18 0.074 mreD b3249 rod shape-determining protein Cell processes "structural component; Murein sacculus, peptidoglycan" b3250 1237 1414 -1.14 -0.058 1410 1780 -1.26 -0.101 1326 1595 0.007822 0.009604 M12 2 1 527 -1.23 -0.089 mreC b3250 rod shape-determining protein Cell processes "structural component; Murein sacculus, peptidoglycan" b3251 3536 5813 -1.64 -0.216 3258 3925 -1.20 -0.081 4675 3592 0.027583 0.021625 O12 2 1 528 1.28 0.106 mreB b3251 "regulator of ftsI, penicillin binding protein 3, septation function" Cell processes phenotype; Cell division b3252 3984 4381 -1.10 -0.041 5389 5526 -1.03 -0.011 4182 5457 0.024678 0.032857 P19 1 3 3920 -1.33 -0.124 yhdA b3252 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3253 960 699 1.37 0.138 673 879 -1.31 -0.116 829 776 0.004893 0.004670 P19 3 2 2576 1.05 0.020 yhdH b3253 putative dehydrogenase Putative enzymes putative enzyme; Not classified b3254 329 331 -1.00 0.000 544 473 1.09 0.037 330 509 0.001948 0.003064 B21 1 3 3921 -1.02 -0.009 b3254 b3254 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3255 1327 1775 -1.34 -0.126 3835 3773 1.02 0.007 1551 3804 0.009152 0.022901 E16 2 2 2075 -2.50 -0.398 accB b3255 "acetylCoA carboxylase, BCCP subunit; carrier of biotin" Fatty acid and phospholipid metabolism "carrier; Biosynthesis of cofactors, carriers: biotin carboxyl carrier protein (BCCP)" b3256 2157 1942 1.11 0.046 7083 7404 -1.05 -0.019 2050 7244 0.012095 0.043610 G16 2 2 2076 -3.61 -0.557 accC b3256 "acetyl CoA carboxylase, biotin carboxylase subunit" Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b3257 9062 7763 1.17 0.067 8610 8425 1.02 0.009 8412 8518 0.049640 0.051281 D21 1 3 3922 -1.03 -0.014 yhdT b3257 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3258 1713 1599 1.07 0.030 795 737 1.08 0.033 1656 766 0.009772 0.004610 H11 1 1 812 2.12 0.326 panF b3258 sodium/pantothenate symporter Transport and binding proteins transport; Transport of small molecules: Cations b3259 4596 3803 1.21 0.082 16673 17271 -1.04 -0.015 4199 16972 0.024780 0.102181 E11 3 2 1771 -4.12 -0.615 prmA b3259 methylase for 50S ribosomal subunit protein L11 "Translation, post-translational modification" "enzyme; Ribosomal proteins - synthesis, modification" b3260 812 676 1.20 0.080 3026 2872 1.05 0.023 744 2949 0.004389 0.017756 B21 3 2 2577 -4.05 -0.607 yhdG b3260 putative dehydrogenase Putative enzymes putative enzyme; Not classified b3261 1282 1019 1.26 0.100 7361 7477 -1.02 -0.007 1150 7419 0.006788 0.044666 M9 1 2 1575 -6.58 -0.818 fis b3261 site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription Regulatory function "factor; DNA - replication, repair, restriction/modification" b3262 1810 1109 1.63 0.213 1180 1097 1.08 0.032 1459 1138 0.008611 0.006852 D21 3 2 2578 1.26 0.099 yhdJ b3262 putative methyltransferase Putative enzymes putative enzyme; Not classified b3263 257 112 1.00 0.000 269 292 -1.00 0.000 185 281 0.001091 0.001689 F21 1 3 3923 -1.00 0.000 yhdU b3263 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3264 276 245 1.00 0.000 148 247 -1.00 0.000 260 197 0.001537 0.001187 F16 1 1 1211 1.00 0.000 envR b3264 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3265 1010 1264 -1.25 -0.098 356 945 -1.89 -0.276 1137 650 0.006709 0.003916 A14 2 1 529 1.71 0.234 acrE b3265 transmembrane protein affects septum formation and cell membrane permeability Cell structure membrane; Inner membrane b3266 2746 2184 1.26 0.099 959 965 -1.01 -0.003 2465 962 0.014543 0.005792 H16 1 1 1212 2.51 0.400 acrF b3266 integral transmembrane protein; acridine resistance Cell processes membrane; Drug/analog sensitivity b3267 185 294 -1.00 0.000 217 156 1.00 0.000 239 187 0.001413 0.001125 H21 1 3 3924 1.00 0.000 yhdV b3267 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3268 1162 940 1.24 0.092 873 704 1.24 0.093 1051 789 0.006201 0.004748 L13 3 1 1014 1.31 0.116 yhdW b3268 putative periplasmic binding transport protein Putative transport proteins putative transport; Not classified b3269 2733 2620 1.04 0.018 1626 1157 1.41 0.148 2676 1392 0.015793 0.008379 N13 3 1 1015 1.88 0.275 yhdX b3269 putative transport system permease protein Putative transport proteins putative transport; Not classified b3270 2413 2282 1.06 0.024 2032 1891 1.07 0.031 2347 1961 0.013850 0.011809 P13 3 1 1016 1.17 0.069 yhdY b3270 putative transport system permease protein Putative transport proteins putative transport; Not classified b3271 2828 2689 1.05 0.022 1834 1746 1.05 0.021 2758 1790 0.016277 0.010776 B15 3 1 1017 1.51 0.179 yhdZ b3271 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b3279 2597 2763 -1.06 -0.027 2925 2131 1.37 0.138 2680 2528 0.015815 0.015221 F21 3 2 2579 1.04 0.017 yrdA b3279 putative transferase Putative enzymes putative enzyme; Not classified b3280 865 451 1.73 0.238 2496 2390 1.04 0.019 658 2443 0.003882 0.014708 J21 1 3 3925 -3.79 -0.579 yrdB b3280 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3281 1178 1329 -1.13 -0.052 1745 1260 1.39 0.141 1254 1502 0.007397 0.009045 M4 1 2 1935 -1.22 -0.087 aroE b3281 dehydroshikimate reductase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Chorismate b3282 846 1035 -1.22 -0.087 750 832 -1.11 -0.046 940 791 0.005549 0.004762 L21 1 3 3926 1.17 0.066 yrdC b3282 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3283 1530 1457 1.05 0.021 1322 1450 -1.10 -0.040 1493 1386 0.008811 0.008342 O9 1 2 1576 1.06 0.024 yrdD b3283 putative DNA topoisomerase Putative enzymes putative enzyme; Not classified b3284 2406 1864 1.29 0.111 916 1060 -1.16 -0.063 2135 988 0.012598 0.005950 N21 1 3 3927 2.12 0.326 smg b3284 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3285 3321 2522 1.32 0.120 4840 4755 1.02 0.008 2922 4797 0.017239 0.028882 P21 1 3 3928 -1.68 -0.224 smf_2 b3285 "orf, fragment 2" "Hypothetical, unclassified, unknown" orf; Unknown b3286 427 355 1.00 0.000 455 384 1.00 0.000 391 420 0.002309 0.002526 B23 1 3 3929 -1.00 0.000 smf_1 b3286 "orf, fragment 1" "Hypothetical, unclassified, unknown" orf; Unknown b3287 1812 1345 1.35 0.129 3124 2625 1.19 0.076 1579 2874 0.009316 0.017306 G11 3 2 1772 -1.86 -0.269 def b3287 peptide deformylase "Translation, post-translational modification" enzyme; Proteins - translation and modification b3288 1258 1079 1.17 0.067 1902 1298 1.46 0.166 1168 1600 0.006895 0.009633 I11 3 2 1773 -1.40 -0.145 fmt b3288 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3289 463 382 1.00 0.000 728 833 -1.15 -0.059 422 781 0.002493 0.004699 D23 1 3 3930 -1.57 -0.195 sun b3289 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3290 1485 1745 -1.17 -0.070 1336 1062 1.26 0.100 1615 1199 0.009531 0.007219 J11 1 1 813 1.32 0.121 trkA b3290 transport of potassium Transport and binding proteins transport; Transport of small molecules: Cations b3291 852 1045 -1.23 -0.089 177 185 -1.00 0.000 948 181 0.005596 0.001088 J16 1 1 1213 1.87 0.271 mscL b3291 mechanosensitive channel Transport and binding proteins transport; Transport of small molecules: Other b3292 4399 3978 1.11 0.044 2193 2716 -1.24 -0.093 4189 2455 0.024715 0.014778 K19 3 1 270 1.67 0.223 yhdM b3292 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3293 677 726 -1.07 -0.031 658 773 -1.17 -0.069 702 716 0.004141 0.004308 F23 1 3 3931 -1.04 -0.017 yhdN b3293 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3294 5733 7350 -1.28 -0.108 23581 24820 -1.05 -0.022 6542 24200 0.038601 0.145699 K11 3 2 1774 -3.77 -0.577 rplQ b3294 50S ribosomal subunit protein L17 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3295 12966 12329 1.05 0.022 39788 44650 -1.12 -0.050 12647 42219 0.074628 0.254182 G5 2 2 1652 -3.41 -0.532 rpoA b3295 "RNA polymerase, alpha subunit" "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b3296 3791 2966 1.28 0.107 9780 10345 -1.06 -0.024 3378 10062 0.019934 0.060581 M11 3 2 1775 -3.04 -0.483 rpsD b3296 30S ribosomal subunit protein S4 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3297 4559 3235 1.41 0.149 12145 12208 -1.01 -0.002 3897 12176 0.022996 0.073309 O11 3 2 1776 -3.19 -0.504 rpsK b3297 30S ribosomal subunit protein S11 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3298 9484 8559 1.11 0.045 21222 22305 -1.05 -0.022 9022 21764 0.053234 0.131030 A13 3 2 1777 -2.46 -0.391 rpsM b3298 30S ribosomal subunit protein S13 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3299 3848 3427 1.12 0.050 7278 8024 -1.10 -0.042 3638 7651 0.021464 0.046063 C13 3 2 1778 -2.15 -0.332 rpmJ b3299 50S ribosomal subunit protein L36 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3300 10235 9093 1.13 0.051 27385 28693 -1.05 -0.020 9664 28039 0.057026 0.168809 D15 3 1 1018 -2.96 -0.471 prlA b3300 putative ATPase subunit of translocase Putative transport proteins putative transport; Not classified b3301 33184 32016 1.04 0.016 67976 65775 1.03 0.014 32600 66876 0.192361 0.402629 E13 3 2 1779 -2.09 -0.321 rplO b3301 50S ribosomal subunit protein L15 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3302 6792 4263 1.59 0.202 15883 15812 1.00 0.002 5527 15848 0.032614 0.095413 G13 3 2 1780 -2.93 -0.466 rpmD b3302 50S ribosomal subunit protein L30 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3303 7081 4066 1.74 0.241 23944 24386 -1.02 -0.008 5573 24165 0.032887 0.145488 I13 3 2 1781 -4.42 -0.646 rpsE b3303 30S ribosomal subunit protein S5 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3304 2223 1645 1.35 0.131 7169 7797 -1.09 -0.036 1934 7483 0.011413 0.045051 K13 3 2 1782 -3.95 -0.596 rplR b3304 50S ribosomal subunit protein L18 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3305 15645 13629 1.15 0.060 42314 47234 -1.12 -0.048 14637 44774 0.086370 0.269565 M13 3 2 1783 -3.12 -0.494 rplF b3305 50S ribosomal subunit protein L6 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3306 2742 2799 -1.02 -0.009 6240 6546 -1.05 -0.021 2770 6393 0.016347 0.038488 O13 3 2 1784 -2.35 -0.372 rpsH b3306 "30S ribosomal subunit protein S8, and regulator" "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3307 14531 13250 1.10 0.040 38856 41690 -1.07 -0.031 13890 40273 0.081963 0.242467 A15 3 2 1785 -2.96 -0.471 rpsN b3307 30S ribosomal subunit protein S14 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3308 6949 5889 1.18 0.072 24817 23782 1.04 0.018 6419 24299 0.037877 0.146295 C15 3 2 1786 -3.86 -0.587 rplE b3308 50S ribosomal subunit protein L5 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3309 3104 2549 1.22 0.086 21662 19885 1.09 0.037 2827 20773 0.016681 0.125068 E15 3 2 1787 -7.50 -0.875 rplX b3309 50S ribosomal subunit protein L24 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3310 8828 5228 1.69 0.228 24149 25058 -1.04 -0.016 7028 24604 0.041471 0.148128 G15 3 2 1788 -3.57 -0.553 rplN b3310 50S ribosomal subunit protein L14 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3311 9007 7698 1.17 0.068 18549 17630 1.05 0.022 8352 18090 0.049285 0.108910 I15 3 2 1789 -2.21 -0.344 rpsQ b3311 30S ribosomal subunit protein S17 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3312 15183 12728 1.19 0.077 45665 45340 1.01 0.003 13955 45503 0.082347 0.273951 K15 3 2 1790 -3.33 -0.522 rpmC b3312 50S ribosomal subunit protein L29 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3313 13402 12138 1.10 0.043 46606 46372 1.01 0.002 12770 46489 0.075354 0.279889 M15 3 2 1791 -3.71 -0.570 rplP b3313 50S ribosomal subunit protein L16 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3314 11048 10401 1.06 0.026 24552 23554 1.04 0.018 10724 24053 0.063282 0.144813 O15 3 2 1792 -2.29 -0.360 rpsC b3314 30S ribosomal subunit protein S3 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3315 4394 3662 1.20 0.079 15138 14875 1.02 0.008 4028 15006 0.023765 0.090346 A17 3 2 1793 -3.80 -0.580 rplV b3315 50S ribosomal subunit protein L22 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3316 6082 5604 1.09 0.036 26026 23329 1.12 0.048 5843 24678 0.034478 0.148573 C17 3 2 1794 -4.31 -0.634 rpsS b3316 30S ribosomal subunit protein S19 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3317 11128 9387 1.19 0.074 42383 44580 -1.05 -0.022 10257 43482 0.060525 0.261785 E17 3 2 1795 -4.33 -0.636 rplB b3317 50S ribosomal subunit protein L2 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3318 4995 5538 -1.11 -0.045 22538 21206 1.06 0.026 5267 21872 0.031078 0.131683 G17 3 2 1796 -4.24 -0.627 rplW b3318 50S ribosomal subunit protein L23 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3319 14099 13284 1.06 0.026 40809 39338 1.04 0.016 13691 40074 0.080789 0.241265 I17 3 2 1797 -2.99 -0.475 rplD b3319 "50S ribosomal subunit protein L4, regulates expression of S10 operon" "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3320 5559 5420 1.03 0.011 19292 19294 -1.00 0.000 5490 19293 0.032392 0.116155 K17 3 2 1798 -3.59 -0.555 rplC b3320 50S ribosomal subunit protein L3 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3321 4553 3289 1.38 0.141 16488 17383 -1.05 -0.023 3921 16935 0.023137 0.101960 M17 3 2 1799 -4.41 -0.644 rpsJ b3321 30S ribosomal subunit protein S10 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3322 1666 904 1.84 0.265 812 666 1.22 0.086 1285 739 0.007582 0.004450 A11 1 2 1577 1.70 0.231 pinO b3322 calcium-binding protein required for initiation of chromosome replication "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b3323 4745 3839 1.24 0.092 3248 3342 -1.03 -0.012 4292 3295 0.025325 0.019836 H23 1 3 3932 1.28 0.106 yheD b3323 putative export protein A for general secretion pathway (GSP) Putative transport proteins putative transport; Not classified b3324 2103 1445 1.46 0.163 2428 2806 -1.16 -0.063 1774 2617 0.010467 0.015756 J23 1 3 3933 -1.51 -0.178 yheE b3324 putative general secretion pathway for protein export (GSP) Putative transport proteins putative transport; Not classified b3325 904 1068 -1.18 -0.072 1571 1588 -1.01 -0.005 986 1579 0.005817 0.009509 L23 1 3 3934 -1.63 -0.213 yheF b3325 putative general protein secretion protein Putative transport proteins putative transport; Not classified b3326 867 838 1.03 0.015 1207 1044 1.16 0.063 853 1126 0.005033 0.006778 N23 1 3 3935 -1.35 -0.129 yheG b3326 putative general secretion pathway for protein export (GSP) (TYPE II TRAFFIC WARDEN ATPASE) Putative transport proteins putative transport; Not classified b3327 1129 1279 -1.13 -0.054 1651 1782 -1.08 -0.033 1204 1717 0.007103 0.010335 L11 1 1 814 -1.45 -0.163 hofF b3327 putative general protein secretion protein Putative transport proteins putative transport; Not classified b3328 392 619 -1.24 -0.093 61 63 -1.00 0.000 505 62 0.002982 0.000373 N11 1 1 815 1.00 0.000 hofG b3328 putative general protein secretion protein Putative transport proteins putative transport; Not classified b3329 10223 10565 -1.03 -0.014 4479 4081 1.10 0.040 10394 4280 0.061331 0.025768 P11 1 1 816 2.38 0.377 hofH b3329 putative general protein secretion protein Putative transport proteins putative transport; Not classified b3330 6900 9399 -1.36 -0.134 13746 13200 1.04 0.018 8149 13473 0.048086 0.081114 P23 1 3 3936 -1.69 -0.227 yheH b3330 putative export protein for general secretion pathway (GSP) Putative transport proteins putative transport; Not classified b3331 18362 19174 -1.04 -0.019 22240 23488 -1.06 -0.024 18768 22864 0.110744 0.137653 B1 2 3 3937 -1.24 -0.094 yheI b3331 putative export protein I for general secretion pathway (GSP) Putative transport proteins putative transport; Not classified b3332 4479 4676 -1.04 -0.019 3344 3374 -1.01 -0.004 4578 3359 0.027012 0.020223 D1 2 3 3938 1.34 0.126 yheJ b3332 putative export protein J for general secretion pathway (GSP) Putative transport proteins putative transport; Not classified b3333 5172 5818 -1.12 -0.051 3553 4088 -1.15 -0.061 5495 3820 0.032425 0.023001 F1 2 3 3939 1.41 0.149 yheK b3333 putative general protein secretion protein Putative transport proteins putative transport; Not classified b3334 238 383 -1.00 0.000 135 109 1.00 0.000 310 122 0.001832 0.000736 B13 1 1 817 1.00 0.000 pshM b3334 putative general secretion Putative transport proteins putative transport; Not classified b3335 3206 4296 -1.34 -0.127 5405 5237 1.03 0.014 3751 5321 0.022133 0.032035 O17 3 2 1800 -1.45 -0.161 hofD b3335 "leader peptidase, integral membrane protein" Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b3336 4005 2970 1.35 0.130 1823 1729 1.05 0.023 3488 1776 0.020579 0.010693 D13 1 1 818 1.92 0.284 bfr b3336 "bacterioferrin, an iron storage homoprotein" Transport and binding proteins carrier; Transport of small molecules: Cations b3337 4098 3946 1.04 0.016 2441 2492 -1.02 -0.009 4022 2467 0.023734 0.014850 H1 2 3 3940 1.60 0.204 yheA b3337 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3338 4447 4312 1.03 0.013 3143 3476 -1.11 -0.044 4379 3310 0.025840 0.019926 H21 3 2 2580 1.30 0.113 yheB b3338 putative enzyme Putative enzymes putative enzyme; Not classified b3339 66311 59477 1.11 0.047 177449 162574 1.09 0.038 62894 170011 0.371119 1.023563 A19 3 2 1801 -2.76 -0.441 tufA b3339 protein chain elongation factor EF-Tu (duplicate of tufB) "Translation, post-translational modification" factor; Proteins - translation and modification b3340 14551 14704 -1.01 -0.005 39607 38538 1.03 0.012 14627 39073 0.086312 0.235239 C19 3 2 1802 -2.73 -0.435 fusA b3340 GTP-binding protein chain elongation factor EF-G "Translation, post-translational modification" factor; Proteins - translation and modification b3341 5058 4882 1.04 0.015 14544 16195 -1.11 -0.047 4970 15370 0.029327 0.092534 E19 3 2 1803 -3.16 -0.499 rpsG b3341 "30S ribosomal subunit protein S7, initiates assembly" "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3342 9858 11329 -1.15 -0.060 35503 34921 1.02 0.007 10593 35212 0.062508 0.211997 G19 3 2 1804 -3.39 -0.530 rpsL b3342 30S ribosomal subunit protein S12 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3343 1954 2996 -1.53 -0.186 1652 2366 -1.43 -0.156 2475 2009 0.014606 0.012094 J1 2 3 3941 1.21 0.082 yheL b3343 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3344 981 1235 -1.26 -0.100 952 1173 -1.23 -0.091 1108 1062 0.006540 0.006397 L1 2 3 3942 1.02 0.010 yheM b3344 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3345 15126 5598 2.70 0.432 41398 46101 -1.11 -0.047 10362 43750 0.061142 0.263398 N1 2 3 3943 -4.31 -0.634 yheN b3345 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3346 4476 4341 1.03 0.013 5637 6412 -1.14 -0.056 4408 6025 0.026013 0.036271 D12 2 3 3944 -1.39 -0.144 yheO b3346 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3347 3998 3715 1.08 0.032 9134 8811 1.04 0.016 3856 8972 0.022756 0.054018 I19 3 2 1805 -2.37 -0.375 fkpA b3347 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) "Translation, post-translational modification" enzyme; Proteins - translation and modification b3348 7737 5901 1.31 0.118 5899 6354 -1.08 -0.032 6819 6127 0.040236 0.036885 B3 2 3 3945 1.09 0.038 slyX b3348 host factor for lysis of phiX174 infection "Hypothetical, unclassified, unknown" orf; Unknown function b3349 3303 3095 1.07 0.028 9104 8549 1.06 0.027 3199 8827 0.018875 0.053142 K19 3 2 1806 -2.82 -0.450 slyD b3349 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) "Translation, post-translational modification" enzyme; Proteins - translation and modification b3350 7568 5757 1.31 0.119 3220 3555 -1.10 -0.043 6663 3387 0.039314 0.020392 F13 1 1 819 1.93 0.285 kefB b3350 K+ efflux; NEM-activable K+/H+ antiporter Transport and binding proteins transport; Transport of small molecules: Cations b3351 300 568 -1.14 -0.055 210 431 -1.00 0.000 434 321 0.002561 0.001932 D3 2 3 3946 1.00 0.000 yheR b3351 putative NAD(P)H oxidoreductase Putative enzymes putative enzyme; Not classified b3352 4577 4379 1.05 0.019 3931 4399 -1.12 -0.049 4478 4165 0.026424 0.025076 F3 2 3 3947 1.05 0.023 yheS b3352 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b3353 734 910 -1.24 -0.094 531 726 -1.37 -0.135 822 628 0.004850 0.003783 H3 2 3 3948 1.28 0.108 yheT b3353 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3354 427 683 -1.37 -0.135 320 542 -1.08 -0.035 555 431 0.003275 0.002594 J3 2 3 3949 1.09 0.038 yheU b3354 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3355 752 1079 -1.44 -0.157 439 664 -1.33 -0.124 916 552 0.005404 0.003323 C8 4 2 2234 1.63 0.211 prkB b3355 probable phosphoribulokinase Putative enzymes putative enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism b3356 1731 2257 -1.30 -0.115 1253 1722 -1.37 -0.138 1994 1487 0.011764 0.008954 L3 2 3 3950 1.31 0.119 yhfA b3356 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3357 1362 1454 -1.07 -0.028 767 1085 -1.42 -0.151 1408 926 0.008307 0.005576 M15 2 1 159 1.49 0.173 crp b3357 cyclic AMP receptor protein Regulatory function regulator; Global regulatory functions b3358 1126 1012 1.11 0.047 615 764 -1.24 -0.094 1069 689 0.006309 0.004151 I12 3 1 621 1.52 0.182 yhfK b3358 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3359 18588 13764 1.35 0.131 17518 16421 1.07 0.028 16176 16970 0.095450 0.102166 O4 1 2 1936 -1.07 -0.030 argD b3359 acetylornithine delta-aminotransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b3360 2352 2813 -1.20 -0.078 4113 4126 -1.00 -0.001 2582 4119 0.015237 0.024801 P11 1 2 2352 -1.63 -0.212 pabA b3360 "p-aminobenzoate synthetase, component II" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Folic acid" b3361 8311 8064 1.03 0.013 1701 1856 -1.09 -0.038 8188 1779 0.048315 0.010709 L16 1 1 1214 4.51 0.654 fic b3361 "induced in stationary phase, recognized by rpoS, affects cell division" Cell processes phenotype; Cell division b3362 -218 477 -1.00 0.000 -52 367 -1.00 0.000 130 158 0.000764 0.000948 N3 2 3 3951 -1.00 0.000 yhfG b3362 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3363 1098 199 2.20 0.342 1864 2162 -1.16 -0.065 648 2013 0.003826 0.012120 M19 3 2 1807 -3.17 -0.501 ppiA b3363 peptidyl-prolyl cis-trans isomerase A (rotamase A) "Translation, post-translational modification" enzyme; Proteins - translation and modification b3364 3163 2672 1.18 0.073 3333 3058 1.09 0.037 2918 3196 0.017216 0.019240 F15 3 1 1019 -1.12 -0.048 yhfC b3364 putative transport Putative transport proteins putative transport; Not classified b3365 3259 4688 -1.44 -0.158 3960 4140 -1.05 -0.019 3973 4050 0.023444 0.024384 F2 4 1 1443 -1.04 -0.017 nirB b3365 nitrite reductase (NAD(P)H) subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b3366 757 845 -1.12 -0.048 1188 1156 1.03 0.012 801 1172 0.004725 0.007056 H2 4 1 1444 -1.49 -0.174 nirD b3366 nitrite reductase (NAD(P)H) subunit Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b3367 4621 7207 -1.56 -0.193 4799 4465 1.07 0.031 5914 4632 0.034896 0.027888 J2 4 1 1445 1.25 0.097 nirC b3367 nitrite reductase activity Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b3368 633 731 -1.15 -0.062 591 667 -1.13 -0.052 682 629 0.004025 0.003787 B13 1 2 2353 1.06 0.026 cysG b3368 uroporphyrinogen III methylase; sirohaeme biosynthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3369 665 734 -1.10 -0.043 803 988 -1.23 -0.090 699 895 0.004126 0.005389 P3 2 3 3952 -1.31 -0.116 yhfL b3369 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3370 2113 1989 1.06 0.026 1900 1724 1.10 0.042 2051 1812 0.012103 0.010909 H15 3 1 1020 1.11 0.045 yhfM b3370 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b3371 902 740 1.22 0.086 606 635 -1.05 -0.020 821 620 0.004842 0.003735 J15 3 1 1021 1.30 0.113 yhfN b3371 putative transport protein Putative transport proteins putative transport; Not classified b3372 2896 2828 1.02 0.010 2875 2797 1.03 0.012 2862 2836 0.016888 0.017074 B5 2 3 3953 -1.01 -0.005 yhfO b3372 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3373 4375 5718 -1.31 -0.116 4947 5512 -1.11 -0.047 5046 5229 0.029776 0.031483 D5 2 3 3954 -1.06 -0.024 yhfP b3373 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3374 627 515 1.22 0.085 666 550 1.21 0.084 571 608 0.003369 0.003660 J21 3 2 2581 -1.09 -0.036 yhfQ b3374 putative kinase Putative enzymes putative enzyme; Not classified b3375 1168 1304 -1.12 -0.048 825 941 -1.14 -0.057 1236 883 0.007293 0.005319 M19 3 1 271 1.37 0.137 yhfR b3375 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3376 593 747 -1.26 -0.100 780 849 -1.09 -0.037 670 814 0.003955 0.004902 F5 2 3 3955 -1.24 -0.093 yhfS b3376 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3377 866 1287 -1.49 -0.172 508 1941 -3.82 -0.582 1077 1224 0.006354 0.007370 H5 2 3 3956 -1.16 -0.064 yhfT b3377 putative transport system permease protein Putative transport proteins putative transport; Not classified b3378 1093 901 1.21 0.084 550 745 -1.35 -0.132 997 647 0.005885 0.003897 J5 2 3 3957 1.51 0.179 yhfU b3378 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3379 849 691 1.23 0.089 517 323 1.03 0.015 770 420 0.004545 0.002529 L21 3 2 2582 1.51 0.180 yhfV b3379 putative hydrolase Putative enzymes putative enzyme; Not classified b3380 939 737 1.27 0.105 814 635 1.28 0.108 838 725 0.004947 0.004364 N21 3 2 2583 1.13 0.055 yhfW b3380 putative mutase Putative enzymes putative enzyme; Not classified b3381 554 963 -1.74 -0.240 751 820 -1.09 -0.038 758 786 0.004474 0.004729 L5 2 3 3958 -1.06 -0.024 yhfX b3381 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3382 8477 8699 -1.03 -0.011 9844 10569 -1.07 -0.031 8588 10207 0.050675 0.061450 N5 2 3 3959 -1.21 -0.084 yhfY b3382 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3383 5332 6752 -1.27 -0.103 5104 6119 -1.20 -0.079 6042 5611 0.035652 0.033783 P5 2 3 3960 1.06 0.023 yhfZ b3383 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3384 7804 8474 -1.09 -0.036 16217 15018 1.08 0.033 8139 15618 0.048025 0.094026 O19 3 2 1808 -1.96 -0.292 trpS b3384 tryptophan tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3385 2166 1548 1.40 0.146 1763 1928 -1.09 -0.039 1857 1846 0.010957 0.011111 G23 1 1 92 -1.01 -0.006 gph b3385 phosphoglycolate phosphatase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3386 3802 2869 1.33 0.122 2185 2105 1.04 0.016 3336 2145 0.019682 0.012913 L2 4 1 1446 1.52 0.183 rpe b3386 D-ribulose-5-phosphate 3-epimerase Central intermediary metabolism "enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b3387 845 770 1.10 0.040 694 654 1.06 0.026 808 674 0.004767 0.004059 C11 1 2 1578 1.17 0.070 dam b3387 DNA adenine methylase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3388 6323 5857 1.08 0.033 4245 4217 1.01 0.003 6090 4231 0.035933 0.025472 E8 4 2 2235 1.41 0.149 damX b3388 putative membrane protein; interferes with cell division Putative factors putative membrane; Cell division b3389 1878 2185 -1.16 -0.066 3306 3298 1.00 0.001 2032 3302 0.011988 0.019879 A6 1 2 1937 -1.66 -0.220 aroB b3389 3-dehydroquinate synthase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Chorismate b3390 1574 919 1.71 0.233 2254 2144 1.05 0.022 1247 2199 0.007355 0.013239 C6 1 2 1938 -1.80 -0.255 aroK b3390 shikimate kinase I Amino acid biosynthesis enzyme; Amino acid biosynthesis: Chorismate b3391 1123 958 1.17 0.069 426 623 -1.25 -0.095 1041 524 0.006140 0.003156 H13 1 1 820 1.95 0.289 hofQ b3391 putative transport portein Putative transport proteins putative transport; Not classified b3392 2414 2319 1.04 0.018 793 766 1.04 0.015 2367 780 0.013965 0.004693 B7 2 3 3961 2.98 0.474 yrfA b3392 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3393 3145 4063 -1.29 -0.111 5425 5210 1.04 0.018 3604 5317 0.021266 0.032013 D7 2 3 3962 -1.51 -0.178 yrfB b3393 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3394 172 319 -1.00 0.000 225 509 -1.02 -0.008 246 367 0.001450 0.002209 F7 2 3 3963 -1.00 0.000 yrfC b3394 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3395 1940 2292 -1.18 -0.072 2019 1846 1.09 0.039 2116 1933 0.012487 0.011635 H7 2 3 3964 1.07 0.031 yrfD b3395 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3396 2169 2351 -1.08 -0.035 2090 2266 -1.08 -0.035 2260 2178 0.013335 0.013113 C14 2 1 530 1.02 0.007 mrcA b3396 peptidoglycan synthetase; penicillin-binding protein 1A Cell structure "enzyme; Murein sacculus, peptidoglycan" b3397 11008 10852 1.01 0.006 5273 5968 -1.13 -0.054 10930 5621 0.064495 0.033839 J7 2 3 3965 1.91 0.280 yrfE b3397 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3398 1407 1153 1.22 0.086 1469 1465 1.00 0.001 1280 1467 0.007551 0.008832 P21 3 2 2584 -1.17 -0.068 yrfF b3398 putative dehydrogenase Putative enzymes putative enzyme; Not classified b3399 2003 1429 1.40 0.147 4502 4302 1.05 0.020 1716 4402 0.010125 0.026501 B23 3 2 2585 -2.62 -0.418 yrfG b3399 putative phosphatase Putative enzymes putative enzyme; Not classified b3400 3710 3777 -1.02 -0.008 2583 3143 -1.22 -0.085 3744 2863 0.022091 0.017239 L7 2 3 3966 1.28 0.108 yrfH b3400 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3401 1477 1585 -1.07 -0.031 1469 1663 -1.13 -0.054 1531 1566 0.009036 0.009428 N7 2 3 3967 -1.04 -0.018 yrfI b3401 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3402 1305 1232 1.06 0.025 590 670 -1.14 -0.056 1269 630 0.007486 0.003793 L15 3 1 1022 1.97 0.295 yhgE b3402 putative transport Putative transport proteins putative transport; Not classified b3403 7043 6945 1.01 0.006 7157 6961 1.03 0.012 6994 7059 0.041267 0.042498 G8 4 2 2236 -1.03 -0.013 pckA b3403 phosphoenolpyruvate carboxykinase Central intermediary metabolism enzyme; Central intermediary metabolism: Gluconeogenesis b3404 1513 1658 -1.10 -0.040 1095 970 1.13 0.053 1585 1033 0.009355 0.006216 O15 2 1 160 1.50 0.178 envZ b3404 "protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC" Regulatory function enzyme; Global regulatory functions b3405 1199 993 1.21 0.082 1157 1214 -1.05 -0.021 1096 1186 0.006467 0.007139 A17 2 1 161 -1.10 -0.043 ompR b3405 "response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis" Regulatory function regulator; Global regulatory functions b3406 163 460 -1.00 0.000 483 485 -1.00 0.000 312 484 0.001840 0.002914 I5 2 2 1653 -1.00 0.000 greB b3406 transcription elongation factor and transcript cleavage Regulatory function "regulator; RNA synthesis, modification, DNA transcription" b3407 17426 16678 1.04 0.019 31077 32447 -1.04 -0.019 17052 31762 0.100617 0.191227 P7 2 3 3968 -1.90 -0.279 yhgF b3407 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3408 3416 2631 1.30 0.113 1948 2442 -1.25 -0.098 3024 2195 0.017841 0.013216 J13 1 1 821 1.35 0.130 feoA b3408 ferrous iron transport protein A Transport and binding proteins transport; Transport of small molecules: Cations b3409 1094 1215 -1.11 -0.046 740 879 -1.19 -0.074 1155 809 0.006812 0.004873 L13 1 1 822 1.40 0.145 feoB b3409 ferrous iron transport protein B Transport and binding proteins transport; Transport of small molecules: Cations b3410 2063 2710 -1.31 -0.119 3422 4359 -1.27 -0.105 2387 3890 0.014083 0.023423 B9 2 3 3969 -1.66 -0.221 yhgG b3410 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3411 2987 2493 1.20 0.079 2206 2258 -1.02 -0.010 2740 2232 0.016168 0.013439 D9 2 3 3970 1.20 0.080 yhgA b3411 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3412 1077 888 1.21 0.083 1305 1248 1.05 0.019 983 1276 0.005798 0.007684 D13 1 2 2354 -1.33 -0.122 bioH b3412 biotin biosynthesis; reaction prior to pimeloyl CoA "Biosynthesis of cofactors, prosthetic groups and carriers" "putative enzyme; Biosynthesis of cofactors, carriers: Biotin" b3413 392 628 -1.26 -0.099 742 1055 -1.42 -0.153 510 898 0.003011 0.005408 F9 2 3 3971 -1.80 -0.254 yhgH b3413 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3414 2877 3441 -1.20 -0.078 4226 5003 -1.18 -0.073 3159 4615 0.018642 0.027783 H9 2 3 3972 -1.49 -0.173 yhgI b3414 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3415 462 394 1.00 0.000 126 203 -1.00 0.000 428 164 0.002528 0.000989 N13 1 1 823 1.00 0.000 gntT b3415 high-affinity transport of gluconate / gluconate permease Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3416 4095 3746 1.09 0.039 2586 2609 -1.01 -0.004 3921 2597 0.023134 0.015637 I23 1 1 93 1.48 0.170 malQ b3416 4-alpha-glucanotransferase (amylomaltase) Carbon compound catabolism enzyme; Degradation of polysaccharides b3417 4120 3766 1.09 0.039 3781 4193 -1.11 -0.045 3943 3987 0.023266 0.024005 K23 1 1 94 -1.03 -0.014 malP b3417 maltodextrin phosphorylase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3418 5047 5154 -1.02 -0.009 4264 3924 1.09 0.036 5101 4094 0.030097 0.024647 M23 1 1 95 1.22 0.087 malT b3418 positive regulator of mal regulon Regulatory function regulator; Degradation of small molecules: Carbon compounds b3419 4457 5536 -1.24 -0.094 4059 5438 -1.34 -0.127 4996 4749 0.029483 0.028589 J9 2 3 3973 1.03 0.013 yhgJ b3419 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3420 1246 1680 -1.35 -0.130 933 1450 -1.55 -0.192 1463 1192 0.008631 0.007175 L9 2 3 3974 1.20 0.080 rtcA b3420 RNA 3'-terminal phosphate cyclase "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b3421 4672 4521 1.03 0.014 3491 4125 -1.18 -0.072 4597 3808 0.027124 0.022925 N9 2 3 3975 1.18 0.073 rtcB b3421 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3422 2889 2450 1.18 0.072 2600 2378 1.09 0.039 2670 2489 0.015753 0.014983 O19 3 1 272 1.05 0.022 rtcR b3422 putative 2-component regulator Putative regulatory proteins putative regulator; Not classified b3423 1702 1892 -1.11 -0.046 1356 1360 -1.00 -0.001 1797 1358 0.010601 0.008175 N2 4 1 1447 1.30 0.113 glpR b3423 repressor of the glp operon Regulatory function "regulator; Energy metabolism, carbon: Anaerobic respiration" b3424 1934 1355 1.43 0.155 971 724 1.34 0.128 1645 848 0.009704 0.005104 P2 4 1 1448 1.90 0.279 glpG b3424 protein of glp regulon Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b3425 15020 13719 1.09 0.039 5632 6498 -1.15 -0.062 14369 6065 0.084789 0.036516 B4 4 1 1449 2.32 0.366 glpE b3425 protein of glp regulon Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b3426 14061 13561 1.04 0.016 2906 3645 -1.25 -0.098 13811 3275 0.081493 0.019720 D4 4 1 1450 4.13 0.616 glpD b3426 sn-glycerol-3-phosphate dehydrogenase (aerobic) Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b3427 879 1203 -1.37 -0.136 1125 907 1.24 0.094 1041 1016 0.006144 0.006117 P9 2 3 3976 1.00 0.002 yzgL b3427 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3428 11287 10770 1.05 0.020 6706 9449 -1.41 -0.149 11029 8078 0.065076 0.048631 E14 2 1 531 1.34 0.127 glgP b3428 glycogen phosphorylase Cell processes "enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)" b3429 2257 1851 1.22 0.086 1042 1204 -1.16 -0.063 2054 1123 0.012118 0.006762 G14 2 1 532 1.79 0.253 glgA b3429 glycogen synthase Cell processes "enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)" b3430 2290 2679 -1.17 -0.068 378 716 -1.43 -0.156 2485 547 0.014660 0.003293 I14 2 1 533 4.45 0.649 glgC b3430 glucose-1-phosphate adenylyltransferase Cell processes "enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)" b3431 186 390 -1.00 0.000 10 99 -1.00 0.000 288 55 0.001701 0.000329 K14 2 1 534 1.00 0.000 glgX b3431 "part of glycogen operon, a glycosyl hydrolase, debranching enzyme" Cell processes "enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)" b3432 4529 4769 -1.05 -0.022 1342 2046 -1.52 -0.183 4649 1694 0.027434 0.010197 M14 2 1 535 2.69 0.430 glgB b3432 "1,4-alpha-glucan branching enzyme" Cell processes "enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)" b3433 3677 3300 1.11 0.047 2076 1606 1.29 0.111 3489 1841 0.020585 0.011082 E6 1 2 1939 1.86 0.269 asd b3433 aspartate-semialdehyde dehydrogenase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b3434 250 505 -1.01 -0.004 507 689 -1.36 -0.133 377 598 0.002227 0.003602 B11 2 3 3977 -1.20 -0.079 yhgN b3434 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3435 788 881 -1.12 -0.048 482 320 1.00 0.000 835 401 0.004924 0.002413 P13 1 1 824 1.64 0.215 gntU_2 b3435 "low-affinity gluconate transport permease protein, fragment 2" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3436 2208 2282 -1.03 -0.014 1710 1715 -1.00 -0.001 2245 1713 0.013247 0.010311 B15 1 1 825 1.28 0.109 gntU_1 b3436 "low-affinity gluconate transport permease protein, interrupted" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3437 2458 2578 -1.05 -0.021 1767 1931 -1.09 -0.038 2518 1849 0.014859 0.011133 I8 4 2 2237 1.33 0.125 gntK b3437 "gluconokinase 2, thermoresistant" Carbon compound catabolism enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism b3438 1603 1574 1.02 0.008 1359 1453 -1.07 -0.029 1588 1406 0.009373 0.008465 K8 4 2 2238 1.11 0.044 gntR b3438 regulator of gluconate (gnt) operon Regulatory function regulator; Central intermediary metabolism: Entner-Douderoff b3439 100 331 -1.00 0.000 48 250 -1.00 0.000 216 149 0.001272 0.000896 D11 2 3 3978 1.00 0.000 yhhW b3439 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3440 1482 788 1.88 0.275 861 616 1.40 0.146 1135 738 0.006698 0.004445 A21 3 1 273 1.51 0.178 yhhX b3440 putative regulator Putative regulatory proteins putative regulator; Not classified b3441 682 900 -1.32 -0.120 1173 1442 -1.23 -0.090 791 1307 0.004668 0.007871 F11 2 3 3979 -1.69 -0.227 yhhY b3441 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3442 1044 1087 -1.04 -0.018 853 1116 -1.31 -0.117 1065 985 0.006285 0.005928 H11 2 3 3980 1.06 0.025 yhhZ b3442 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3443 -12 107 -1.00 0.000 88 200 -1.00 0.000 47 144 0.000279 0.000866 J11 2 3 3981 -1.00 0.000 yrhA b3443 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3444 15352 12143 1.26 0.102 13971 14359 -1.03 -0.012 13747 14165 0.081119 0.085279 O23 4 1 384 -1.05 -0.022 insA_6 b3444 IS1 protein InsA "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3445 1153 1261 -1.09 -0.039 1292 916 1.41 0.149 1207 1104 0.007123 0.006646 A2 1 1 385 1.07 0.030 insB_6 b3445 IS1 protein InsB "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3446 16 71 -1.00 0.000 2 114 -1.00 0.000 43 58 0.000255 0.000349 L11 2 3 3982 -1.00 0.000 yrhB b3446 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3447 4021 3780 1.06 0.027 1316 1235 1.07 0.028 3900 1276 0.023014 0.007680 F13 1 2 2355 3.00 0.477 ggt b3447 gamma-glutamyltranspeptidase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b3448 1528 1719 -1.12 -0.051 942 1263 -1.34 -0.127 1623 1103 0.009579 0.006640 N11 2 3 3983 1.44 0.159 yhhA b3448 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3449 2688 2646 1.02 0.007 1939 2012 -1.04 -0.016 2667 1975 0.015737 0.011892 M8 4 2 2239 1.32 0.122 ugpQ b3449 "glycerophosphodiester phosphodiesterase, cytosolic" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3450 8687 6960 1.25 0.096 3642 3709 -1.02 -0.008 7823 3675 0.046164 0.022127 D15 1 1 826 2.09 0.319 ugpC b3450 ATP-binding component of sn-glycerol 3-phosphate transport system Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3451 3853 3385 1.14 0.056 2583 2560 1.01 0.004 3619 2571 0.021355 0.015479 F15 1 1 827 1.38 0.140 ugpE b3451 "sn-glycerol 3-phosphate transport system, integral membrane protein" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3452 827 627 1.32 0.120 316 399 -1.00 0.000 727 358 0.004290 0.002155 H15 1 1 828 1.43 0.155 ugpA b3452 "sn-glycerol 3-phosphate transport system, integral membrane protein" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3453 1422 1253 1.14 0.055 363 384 -1.00 0.000 1337 373 0.007892 0.002248 J15 1 1 829 2.63 0.420 ugpB b3453 sn-glycerol 3-phosphate transport system; periplasmic binding protein Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3454 59027 56465 1.05 0.019 32790 37791 -1.15 -0.062 57746 35291 0.340743 0.212470 L15 1 1 830 1.60 0.205 livF b3454 ATP-binding component of leucine transport Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3455 2004 1654 1.21 0.083 382 501 -1.00 -0.001 1829 441 0.010794 0.002656 N15 1 1 831 3.60 0.556 livG b3455 ATP-binding component of high-affinity branched-chain amino acid transport system Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3456 29211 28441 1.03 0.012 11260 11131 1.01 0.005 28826 11196 0.170092 0.067404 P15 1 1 832 2.52 0.402 livM b3456 high-affinity branched-chain amino acid transport Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3457 10073 8502 1.18 0.074 4719 4058 1.16 0.065 9288 4388 0.054803 0.026420 B17 1 1 833 2.07 0.317 livH b3457 high-affinity branched-chain amino acid transport system; membrane component Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3458 7308 5861 1.25 0.096 2496 2778 -1.11 -0.046 6585 2637 0.038855 0.015878 D17 1 1 834 2.45 0.389 livK b3458 high-affinity leucine-specific transport system; periplasmic binding protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3459 12552 13267 -1.06 -0.024 11348 11636 -1.03 -0.011 12910 11492 0.076177 0.069191 P11 2 3 3984 1.10 0.042 yhhK b3459 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3460 42063 34571 1.22 0.085 15826 16004 -1.01 -0.005 38317 15915 0.226096 0.095819 F17 1 1 835 2.36 0.373 livJ b3460 high-affinity amino acid transport system; periplasmic binding protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3461 4045 5501 -1.36 -0.134 6627 7272 -1.10 -0.040 4773 6950 0.028165 0.041840 K5 2 2 1654 -1.49 -0.172 rpoH b3461 "RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures" Regulatory function factor; Global regulatory functions b3462 962 1157 -1.20 -0.080 932 801 1.16 0.066 1059 867 0.006251 0.005218 N16 1 1 1215 1.20 0.078 ftsX b3462 cell division membrane protein Cell processes membrane; Cell division b3463 4999 5124 -1.03 -0.011 2793 2921 -1.05 -0.019 5062 2857 0.029868 0.017201 P16 1 1 1216 1.74 0.240 ftsE b3463 ATP-binding component of a membrane-associated complex involved in cell division Cell processes phenotype; Not classified b3464 3775 3832 -1.02 -0.007 2068 1878 1.10 0.042 3803 1973 0.022442 0.011881 B18 1 1 1217 1.89 0.276 ftsY b3464 cell division membrane protein Cell processes membrane; Cell division b3465 512 577 -1.13 -0.052 738 896 -1.21 -0.084 544 817 0.003213 0.004919 B13 2 3 3985 -1.53 -0.185 yhhF b3465 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3466 100 57 1.00 0.000 -80 141 -1.00 0.000 79 31 0.000464 0.000185 D13 2 3 3986 1.00 0.000 yhhL b3466 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3467 1086 882 1.23 0.091 1034 1194 -1.15 -0.062 984 1114 0.005807 0.006706 C21 3 1 274 -1.15 -0.063 yhhM b3467 putative receptor Putative factors putative factor; Not classified b3468 772 554 1.39 0.144 925 812 1.14 0.057 663 868 0.003912 0.005228 D23 3 2 2586 -1.34 -0.126 yhhN b3468 putative enzyme Putative enzymes putative enzyme; Not classified b3469 1733 2365 -1.36 -0.135 1959 2172 -1.11 -0.045 2049 2066 0.012090 0.012436 N15 3 1 1023 -1.03 -0.012 zntA b3469 zinc-transporting ATPase Transport and binding proteins transport; Transport of small molecules: Cations b3470 -57 21 -1.00 0.000 184 170 1.00 0.000 -18 177 -0.000108 0.001066 F13 2 3 3987 -1.00 0.000 yhhP b3470 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3471 6156 6116 1.01 0.003 8550 8744 -1.02 -0.010 6136 8647 0.036206 0.052059 H13 2 3 3988 -1.44 -0.158 yhhQ b3471 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3472 372 401 -1.00 0.000 467 972 -1.94 -0.289 386 720 0.002280 0.004332 J13 2 3 3989 -1.44 -0.160 b3472 b3472 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3473 4316 3782 1.14 0.057 2746 2990 -1.09 -0.037 4049 2868 0.023890 0.017267 P15 3 1 1024 1.38 0.141 yhhS b3473 putative transport Putative transport proteins putative transport; Not classified b3474 386 565 -1.13 -0.053 282 424 -1.00 0.000 475 353 0.002805 0.002128 L13 2 3 3990 1.00 0.000 yhhT b3474 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3475 3734 3503 1.07 0.028 4300 4303 -1.00 0.000 3618 4302 0.021351 0.025898 F23 3 2 2587 -1.21 -0.084 yhhU b3475 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3476 744 182 1.49 0.173 372 353 1.00 0.000 463 363 0.002735 0.002183 H17 1 1 836 1.00 0.000 nikA b3476 periplasmic binding protein for nickel Transport and binding proteins transport; Transport of small molecules: Cations b3477 1257 1273 -1.01 -0.006 359 533 -1.07 -0.028 1265 446 0.007463 0.002684 J17 1 1 837 2.49 0.396 nikB b3477 "transport of nickel, membrane protein" Transport and binding proteins transport; Transport of small molecules: Cations b3478 12262 11911 1.03 0.013 3660 3829 -1.05 -0.020 12087 3744 0.071319 0.022543 L17 1 1 838 3.16 0.500 nikC b3478 "transport of nickel, membrane protein" Transport and binding proteins transport; Transport of small molecules: Cations b3479 4713 5253 -1.11 -0.047 8651 8696 -1.01 -0.002 4983 8673 0.029404 0.052219 N17 1 1 839 -1.78 -0.249 nikD b3479 ATP-binding protein of nickel transport system Transport and binding proteins transport; Transport of small molecules: Cations b3480 1618 1295 1.25 0.097 2625 2784 -1.06 -0.026 1457 2704 0.008596 0.016280 P17 1 1 840 -1.89 -0.277 nikE b3480 ATP-binding protein of nickel transport system Transport and binding proteins transport; Transport of small molecules: Cations b3481 313 224 1.00 0.000 118 324 -1.00 0.000 269 221 0.001587 0.001331 N13 2 3 3991 1.00 0.000 yhhG b3481 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3482 2460 2207 1.11 0.047 2848 2811 1.01 0.006 2334 2830 0.013772 0.017036 P13 2 3 3992 -1.24 -0.092 rhsB b3482 rhsB protein in rhs element "Hypothetical, unclassified, unknown" orf; Transposon-related functions b3483 -142 137 -1.00 0.000 -105 35 -1.00 0.000 -2 -35 -0.000015 -0.000213 B15 2 3 3993 1.00 0.000 yhhH b3483 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3484 22887 21989 1.04 0.017 17323 19165 -1.11 -0.044 22438 18244 0.132402 0.109840 E21 3 1 275 1.21 0.081 yhhI b3484 putative receptor Putative factors putative factor; Not classified b3485 1434 1296 1.11 0.044 500 674 -1.35 -0.130 1365 587 0.008054 0.003533 D15 2 3 3994 2.28 0.358 yhhJ b3485 putative transporter Putative transport proteins putative transport; Not classified b3486 3656 2760 1.32 0.122 1735 1830 -1.05 -0.023 3208 1783 0.018928 0.010733 B17 3 1 1025 1.76 0.246 yhiH b3486 "putative ATP-binding component of a transport system, fragment 1" Putative transport proteins putative transport; Not classified b3487 1730 1355 1.28 0.106 2392 2706 -1.13 -0.054 1542 2549 0.009101 0.015346 G21 3 1 276 -1.69 -0.227 yhiI b3487 putative membrane protein putative membrane protein putative membrane; Not classified b3488 4905 5847 -1.19 -0.076 7027 6979 1.01 0.003 5376 7003 0.031720 0.042163 F15 2 3 3995 -1.33 -0.124 yhiJ b3488 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3489 -40 283 -1.00 0.000 -45 0 -1.00 0.000 121 -22 0.000716 -0.000135 H15 2 3 3996 1.00 0.000 yhiK b3489 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3490 -128 97 -1.00 0.000 79 65 1.00 0.000 -16 72 -0.000093 0.000436 J15 2 3 3997 -1.00 0.000 yhiL b3490 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3491 907 1295 -1.43 -0.154 595 738 -1.24 -0.093 1101 667 0.006497 0.004014 L15 2 3 3998 1.62 0.209 yhiM b3491 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3492 403 772 -1.54 -0.189 677 982 -1.45 -0.161 588 829 0.003467 0.004993 N15 2 3 3999 -1.44 -0.158 yhiN b3492 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3493 1724 1357 1.27 0.104 2133 2363 -1.11 -0.044 1540 2248 0.009089 0.013537 B19 1 1 841 -1.49 -0.173 pitA b3493 low-affinity phosphate transport Transport and binding proteins transport; Transport of small molecules: Anions b3494 745 945 -1.27 -0.103 174 203 -1.00 0.000 845 188 0.004988 0.001134 P15 2 3 4000 1.66 0.221 yhiO b3494 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3495 7534 6716 1.12 0.050 2436 2305 1.06 0.024 7125 2371 0.042045 0.014274 D18 1 1 1218 2.95 0.469 uspA b3495 universal stress protein; broad regulatory function? Cell processes "putative regulator; Adaptations, atypical conditions" b3496 6448 6291 1.02 0.011 4074 4686 -1.15 -0.061 6370 4380 0.037585 0.026369 D19 1 1 842 1.43 0.154 yhiP b3496 putative transport protein Putative transport proteins putative transport; Not classified b3497 -185 311 -1.00 0.000 53 121 -1.00 0.000 63 87 0.000371 0.000524 B17 2 3 4001 -1.00 0.000 yhiQ b3497 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3498 13207 13019 1.01 0.006 22685 23389 -1.03 -0.013 13113 23037 0.077375 0.138697 A21 3 2 1809 -1.79 -0.253 prlC b3498 oligopeptidase A Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b3499 718 672 1.07 0.029 559 515 1.08 0.035 695 537 0.004100 0.003232 D17 2 3 4002 1.27 0.103 yhiR b3499 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3500 2735 3010 -1.10 -0.042 2582 2329 1.11 0.045 2872 2456 0.016949 0.014784 H13 1 2 2356 1.15 0.059 gor b3500 glutathione oxidoreductase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b3501 1700 1745 -1.03 -0.011 347 209 1.00 0.000 1723 278 0.010164 0.001673 F18 1 1 1219 3.39 0.530 arsR b3501 transcriptional repressor of chromosomal ars operon Regulatory function regulator; Drug/analog sensitivity b3502 392 374 1.00 0.000 427 396 1.00 0.000 383 411 0.002259 0.002477 H18 1 1 1220 -1.00 0.000 arsB b3502 arsenical pump membrane protein Cell processes transport; Drug/analog sensitivity b3503 949 708 1.34 0.127 584 736 -1.26 -0.101 828 660 0.004888 0.003972 J18 1 1 1221 1.23 0.090 arsC b3503 arsenate reductase Cell processes enzyme; Drug/analog sensitivity b3504 7603 7517 1.01 0.005 5325 4889 1.09 0.037 7560 5107 0.044609 0.030747 F17 2 3 4003 1.45 0.162 yhiS b3504 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3505 6372 7052 -1.11 -0.044 6512 8052 -1.24 -0.092 6712 7282 0.039605 0.043841 C2 1 1 386 -1.11 -0.044 trs5_11 b3505 IS5 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3506 1872 1731 1.08 0.034 113 101 1.00 0.000 1801 107 0.010629 0.000644 O14 2 1 536 3.54 0.549 slp b3506 outer membrane protein induced after carbon starvation Cell structure membrane; Outer membrane constituents b3507 1158 1361 -1.17 -0.070 938 1120 -1.19 -0.077 1260 1029 0.007432 0.006193 H17 2 3 4004 1.20 0.079 yhiF b3507 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3508 3686 2974 1.24 0.093 3971 4162 -1.05 -0.020 3330 4066 0.019651 0.024482 D17 3 1 1026 -1.25 -0.095 yhiD b3508 putative transport ATPase Putative transport proteins putative transport; Not classified b3509 30190 30119 1.00 0.001 659 508 1.30 0.113 30154 583 0.177932 0.003511 J17 2 3 4005 50.68 1.705 hdeB b3509 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3510 35858 39823 -1.11 -0.046 93 233 -1.00 0.000 37841 163 0.223287 0.000982 L17 2 3 4006 74.43 1.872 hdeA b3510 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3511 4109 3470 1.18 0.073 97 249 -1.00 0.000 3789 173 0.022360 0.001042 N17 2 3 4007 7.45 0.872 hdeD b3511 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3512 3749 4006 -1.07 -0.029 423 645 -1.29 -0.111 3877 534 0.022880 0.003214 P17 2 3 4008 7.12 0.852 yhiE b3512 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3513 3558 3340 1.07 0.028 1974 1931 1.02 0.010 3449 1953 0.020352 0.011756 L18 1 1 1222 1.73 0.238 yhiU b3513 putative membrane protein putative membrane protein putative membrane; Not classified b3514 187 305 -1.00 0.000 165 347 -1.00 0.000 246 256 0.001453 0.001540 N18 1 1 1223 -1.00 0.000 yhiV b3514 putative transport system permease protein Putative transport proteins putative transport; Not classified b3515 1483 1424 1.04 0.018 354 164 1.00 0.000 1454 259 0.008577 0.001559 I21 3 1 277 2.86 0.456 yhiW b3515 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b3516 6273 6407 -1.02 -0.009 171 60 1.00 0.000 6340 116 0.037410 0.000695 K21 3 1 278 12.47 1.096 yhiX b3516 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b3517 19896 17781 1.12 0.049 515 425 1.03 0.013 18838 470 0.111159 0.002829 O8 4 2 2240 37.05 1.569 gadA b3517 glutamate decarboxylase isozyme Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3518 13917 11972 1.16 0.065 5613 5895 -1.05 -0.021 12945 5754 0.076382 0.034644 F4 4 1 1451 2.20 0.343 yhjA b3518 putative cytochrome C peroxidase (EC 1.11.1) Putative enzymes putative enzyme; Not classified b3519 1634 1101 1.48 0.171 1694 1716 -1.01 -0.006 1367 1705 0.008067 0.010264 O23 1 1 96 -1.27 -0.105 treF b3519 cytoplasmic trehalase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3520 225 361 -1.00 0.000 98 147 -1.00 0.000 293 122 0.001731 0.000737 M21 3 1 279 1.00 0.000 yhjB b3520 putative regulator Putative regulatory proteins putative regulator; Not classified b3521 2184 1993 1.10 0.040 897 972 -1.08 -0.034 2089 934 0.012326 0.005626 O21 3 1 280 2.19 0.341 yhjC b3521 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b3522 8975 9882 -1.10 -0.042 12248 13451 -1.10 -0.041 9428 12849 0.055633 0.077360 B19 2 3 4009 -1.39 -0.143 yhjD b3522 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3523 2921 2773 1.05 0.023 1424 1051 1.36 0.132 2847 1238 0.016798 0.007451 F17 3 1 1027 2.25 0.353 yhjE b3523 putative transport protein Putative transport proteins putative transport; Not classified b3524 2162 1601 1.35 0.130 1053 1633 -1.55 -0.191 1882 1343 0.011103 0.008085 D19 2 3 4010 1.37 0.138 yhjG b3524 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3525 4244 3913 1.08 0.035 3721 3870 -1.04 -0.017 4079 3796 0.024067 0.022852 F19 2 3 4011 1.05 0.022 yhjH b3525 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3526 7737 7369 1.05 0.021 13035 12880 1.01 0.005 7553 12957 0.044568 0.078010 D2 2 3 97 -1.75 -0.243 kdgK b3526 ketodeoxygluconokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3527 1977 2520 -1.27 -0.105 3229 3461 -1.07 -0.030 2248 3345 0.013267 0.020141 H19 2 3 4012 -1.52 -0.181 yhjJ b3527 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3528 288 302 -1.00 0.000 495 550 -1.10 -0.041 295 522 0.001741 0.003144 F19 1 1 843 -1.05 -0.020 dctA b3528 uptake of C4-dicarboxylic acids Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3529 414 616 -1.23 -0.091 351 585 -1.17 -0.068 515 468 0.003039 0.002819 J19 2 3 4013 1.01 0.006 yhjK b3529 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3530 2338 1674 1.40 0.145 2160 2085 1.04 0.015 2006 2123 0.011837 0.012779 H23 3 2 2588 -1.08 -0.033 yhjL b3530 putative oxidoreductase subunit Putative enzymes putative enzyme; Not classified b3531 1817 1366 1.33 0.124 885 1046 -1.18 -0.073 1591 965 0.009389 0.005811 J23 3 2 2589 1.62 0.208 yhjM b3531 putative endoglucanase Putative enzymes putative enzyme; Not classified b3532 1087 1180 -1.09 -0.036 3112 3140 -1.01 -0.004 1134 3126 0.006689 0.018823 L19 2 3 4014 -2.81 -0.449 yhjN b3532 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3533 3101 3152 -1.02 -0.007 3402 3684 -1.08 -0.035 3126 3543 0.018447 0.021329 N19 2 3 4015 -1.16 -0.063 yhjOP b3533 putative cellulose synthase Putative enzymes putative enzyme; Not classified b3534 3143 2647 1.19 0.075 3612 4230 -1.17 -0.069 2895 3921 0.017082 0.023607 P19 2 3 4016 -1.38 -0.141 yhjQ b3534 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3535 2219 2192 1.01 0.005 2757 2569 1.07 0.031 2206 2663 0.013015 0.016032 B21 2 3 4017 -1.23 -0.091 yhjR b3535 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3536 2734 2326 1.18 0.070 3057 2568 1.19 0.076 2530 2812 0.014928 0.016933 C21 3 2 1810 -1.13 -0.055 yhjS b3536 putative protease Putative enzymes putative enzyme; Not classified b3537 1721 1953 -1.13 -0.055 1240 1458 -1.18 -0.070 1837 1349 0.010840 0.008123 D21 2 3 4018 1.33 0.125 yhjT b3537 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3538 1595 1728 -1.08 -0.035 1038 1211 -1.17 -0.067 1662 1125 0.009805 0.006771 F21 2 3 4019 1.45 0.161 yhjU b3538 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3539 2166 1590 1.36 0.134 1047 1154 -1.10 -0.042 1878 1101 0.011080 0.006626 H17 3 1 1028 1.67 0.223 yhjV b3539 putative transporter protein Putative transport proteins putative transport; Not classified b3540 628 533 1.18 0.071 471 544 -1.09 -0.036 580 507 0.003423 0.003055 H19 1 1 844 1.12 0.049 dppF b3540 putative ATP-binding component of dipeptide transport system Transport and binding proteins "transport; Protein, peptide secretion" b3541 3159 1887 1.67 0.224 458 553 -1.11 -0.043 2523 506 0.014888 0.003043 J19 1 1 845 4.89 0.689 dppD b3541 putative ATP-binding component of dipeptide transport system Transport and binding proteins "transport; Protein, peptide secretion" b3542 982 887 1.11 0.044 1830 1763 1.04 0.016 934 1796 0.005513 0.010816 L19 1 1 846 -1.96 -0.293 dppC b3542 dipeptide transport system permease protein 2 Transport and binding proteins "transport; Protein, peptide secretion" b3543 376 332 1.00 0.000 314 336 -1.00 0.000 354 325 0.002090 0.001958 N19 1 1 847 1.00 0.000 dppB b3543 dipeptide transport system permease protein 1 Transport and binding proteins "transport; Protein, peptide secretion" b3544 5640 4660 1.21 0.083 499 399 1.00 0.000 5150 449 0.030391 0.002702 P19 1 1 848 10.13 1.006 dppA b3544 dipeptide transport protein Transport and binding proteins "transport; Protein, peptide secretion" b3546 7136 6127 1.16 0.066 5662 5835 -1.03 -0.013 6631 5749 0.039129 0.034611 H21 2 3 4020 1.13 0.053 yhjW b3546 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3547 275 124 1.00 0.000 216 198 1.00 0.000 200 207 0.001177 0.001248 P18 1 1 1224 -1.00 0.000 yhjX b3547 putative resistance protein Putative transport proteins putative transport; Drug/analog sensitivity b3548 4443 4381 1.01 0.006 2973 2787 1.07 0.028 4412 2880 0.026036 0.017339 I16 2 2 2077 1.50 0.177 yhjY b3548 putative lipase Putative enzymes putative enzyme; Not classified b3549 1159 1020 1.14 0.055 1749 1352 1.29 0.112 1089 1551 0.006427 0.009335 E11 1 2 1579 -1.45 -0.162 tag b3549 "3-methyl-adenine DNA glycosylase I, constitutive" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3550 6644 7349 -1.11 -0.044 13062 14294 -1.09 -0.039 6996 13678 0.041282 0.082348 J21 2 3 4021 -1.99 -0.300 yiaC b3550 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3551 2133 1726 1.24 0.092 3279 3251 1.01 0.004 1929 3265 0.011384 0.019655 J13 1 2 2357 -1.73 -0.237 bisC b3551 biotin sulfoxide reductase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b3552 2135 2830 -1.33 -0.122 2050 2713 -1.32 -0.122 2482 2382 0.014647 0.014339 A16 2 1 537 1.02 0.009 yiaD b3552 putative outer membrane protein putative membrane protein putative membrane; Not classified b3553 2015 1883 1.07 0.029 1493 1165 1.28 0.107 1949 1329 0.011499 0.008001 L23 3 2 2590 1.44 0.158 yiaE b3553 putative dehydrogenase Putative enzymes putative enzyme; Not classified b3554 2822 2952 -1.05 -0.020 4180 4304 -1.03 -0.013 2887 4242 0.017037 0.025540 L21 2 3 4022 -1.50 -0.176 yiaF b3554 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3555 1107 1470 -1.33 -0.123 -43 145 -1.00 0.000 1288 51 0.007602 0.000310 N21 2 3 4023 2.53 0.404 yiaG b3555 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3556 1057 1049 1.01 0.003 6377 5956 1.07 0.030 1053 6167 0.006213 0.037128 B20 1 1 1225 -5.98 -0.776 cspA b3556 "cold shock protein 7.4, transcriptional activator of hns" Regulatory function "regulator; Adaptations, atypical conditions" b3557 732 1013 -1.38 -0.141 803 1123 -1.40 -0.145 873 963 0.005151 0.005798 P21 2 3 4024 -1.13 -0.051 yi5A b3557 IS150 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3558 218 407 -1.00 0.000 153 65 1.00 0.000 312 109 0.001844 0.000656 E2 1 1 387 1.00 0.000 t150 b3558 IS150 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b3559 5239 4731 1.11 0.044 10302 10569 -1.03 -0.011 4985 10435 0.029416 0.062826 E21 3 2 1811 -2.14 -0.330 glyS b3559 "glycine tRNA synthetase, beta subunit" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3560 6235 4749 1.31 0.118 10934 11170 -1.02 -0.009 5492 11052 0.032406 0.066537 G21 3 2 1812 -2.05 -0.312 glyQ b3560 "glycine tRNA synthetase, alpha subunit" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3561 706 571 1.23 0.092 657 713 -1.08 -0.035 639 685 0.003768 0.004126 B23 2 3 4025 -1.09 -0.039 yiaH b3561 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3562 -77 171 -1.00 0.000 -98 41 -1.00 0.000 47 -29 0.000275 -0.000172 D23 2 3 4026 1.00 0.000 yiaA b3562 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3563 -53 167 -1.00 0.000 175 301 -1.00 0.000 57 238 0.000337 0.001433 F23 2 3 4027 -1.00 0.000 yiaB b3563 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3564 346 682 -1.36 -0.135 305 184 1.00 0.000 514 244 0.003033 0.001470 C1 2 1 98 1.01 0.005 xylB b3564 xylulokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3565 -19 411 -1.00 0.000 -69 55 -1.00 0.000 196 -7 0.001158 -0.000044 E1 2 1 99 1.00 0.000 xylA b3565 D-xylose isomerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3566 2237 2149 1.04 0.018 1824 1743 1.05 0.020 2193 1783 0.012940 0.010736 B21 1 1 849 1.21 0.081 xylF b3566 xylose binding protein transport system Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3567 6789 6697 1.01 0.006 3927 4323 -1.10 -0.042 6743 4125 0.039790 0.024835 D21 1 1 850 1.60 0.205 xylG b3567 putative ATP-binding protein of xylose transport system Putative transport proteins putative transport; Not classified b3568 3493 2641 1.32 0.122 3769 4006 -1.06 -0.026 3067 3887 0.018098 0.023403 F21 1 1 851 -1.29 -0.112 xylH b3568 "putative xylose transport, membrane component" Putative transport proteins putative transport; Not classified b3569 3108 3125 -1.01 -0.002 2180 2376 -1.09 -0.037 3117 2278 0.018390 0.013712 G1 2 1 100 1.34 0.127 xylR b3569 putative regulator of xyl operon Putative regulatory proteins putative regulator; Degradation of small molecules: Carbon compounds b3570 1262 1690 -1.34 -0.127 1364 1548 -1.14 -0.055 1476 1456 0.008710 0.008766 H23 2 3 4028 -1.01 -0.003 bax b3570 putative ATP-binding protein "Hypothetical, unclassified, unknown" orf; Not classified b3571 1566 1796 -1.15 -0.060 1050 1213 -1.15 -0.062 1681 1131 0.009919 0.006812 I1 2 1 101 1.46 0.163 malS b3571 alpha-amylase Carbon compound catabolism enzyme; Degradation of polysaccharides b3572 3223 3110 1.04 0.015 2534 2735 -1.08 -0.033 3167 2635 0.018685 0.015862 G6 1 2 1940 1.18 0.071 avtA b3572 "alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Alanine b3573 639 995 -1.56 -0.192 928 1054 -1.14 -0.055 817 991 0.004822 0.005965 J23 2 3 4029 -1.24 -0.092 yiaI b3573 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3574 2722 2351 1.16 0.064 3078 3197 -1.04 -0.016 2537 3138 0.014968 0.018891 A23 3 1 281 -1.26 -0.101 yiaJ b3574 putative regulator Putative regulatory proteins putative regulator; Not classified b3575 2112 2201 -1.04 -0.018 2012 1848 1.09 0.037 2157 1930 0.012726 0.011622 N23 3 2 2591 1.10 0.039 yiaK b3575 putative dehydrogenase Putative enzymes putative enzyme; Not classified b3576 835 754 1.11 0.045 629 664 -1.06 -0.024 794 647 0.004687 0.003893 P23 3 2 2592 1.20 0.081 yiaL b3576 putative lipase Putative enzymes putative enzyme; Not classified b3577 66 511 -1.02 -0.010 381 809 -1.62 -0.209 289 595 0.001704 0.003583 L23 2 3 4030 -1.19 -0.077 yiaM b3577 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3578 -477 39 -1.00 0.000 -97 36 -1.00 0.000 -219 -31 -0.001293 -0.000184 C16 2 1 538 -1.00 0.000 yiaN b3578 putative membrane protein putative membrane protein putative membrane; Not classified b3579 3414 3817 -1.12 -0.048 1876 1793 1.05 0.020 3616 1834 0.021337 0.011043 J17 3 1 1029 1.93 0.286 yiaO b3579 putative solute-binding transport protein Putative transport proteins putative transport; Not classified b3580 2118 2429 -1.15 -0.059 1281 1246 1.03 0.012 2274 1264 0.013416 0.007608 K1 2 1 102 1.76 0.246 lyxK b3580 "L-xylulose kinase, cryptic" Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3581 6212 6379 -1.03 -0.012 6569 7748 -1.18 -0.072 6296 7158 0.037149 0.043098 N23 2 3 4031 -1.16 -0.065 sgbH b3581 probable 3-hexulose 6-phosphate synthase Putative enzymes "putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3582 1894 3113 -1.64 -0.216 3345 3976 -1.19 -0.075 2503 3661 0.014770 0.022040 P23 2 3 4032 -1.49 -0.174 sgbU b3582 probable 3-hexulose-6-phosphate isomerase Putative enzymes "putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3583 665 611 1.09 0.037 334 694 -1.39 -0.143 638 514 0.003764 0.003095 H4 4 1 1452 1.22 0.085 sgbE b3583 putative epimerase/aldolase Putative enzymes putative enzyme; Not classified b3584 8410 8273 1.02 0.007 4419 4554 -1.03 -0.013 8341 4486 0.049220 0.027011 E16 2 1 539 1.82 0.261 yiaT b3584 putative outer membrane protein putative membrane protein putative membrane; Not classified b3585 3647 3678 -1.01 -0.004 3553 3574 -1.01 -0.003 3662 3564 0.021610 0.021456 C23 3 1 282 1.01 0.003 yiaU b3585 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b3586 626 301 1.25 0.098 388 428 -1.00 0.000 463 408 0.002735 0.002458 L17 3 1 1030 1.00 0.000 yiaV b3586 putative membrane protein putative membrane protein putative membrane; Not classified b3587 2565 2339 1.10 0.040 2442 2887 -1.18 -0.073 2452 2665 0.014468 0.016042 B1 3 3 4033 -1.11 -0.045 yiaW b3587 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3588 404 359 1.00 0.000 188 242 -1.00 0.000 382 215 0.002252 0.001295 M1 2 1 103 1.00 0.000 aldB b3588 aldehyde dehydrogenase B (lactaldehyde dehydrogenase) Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3589 6361 8944 -1.41 -0.148 7405 7188 1.03 0.013 7652 7297 0.045155 0.043931 B1 4 2 2593 1.03 0.012 yiaY b3589 putative oxidoreductase Putative enzymes putative enzyme; Not classified b3590 5951 6430 -1.08 -0.034 9917 9987 -1.01 -0.003 6190 9952 0.036528 0.059917 I21 3 2 1813 -1.64 -0.215 selB b3590 selenocysteinyl-tRNA-specific translation factor "Translation, post-translational modification" factor; Proteins - translation and modification b3591 10240 9238 1.11 0.045 12435 13049 -1.05 -0.021 9739 12742 0.057465 0.076713 K21 3 2 1814 -1.33 -0.125 selA b3591 selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3592 2253 1986 1.13 0.055 2266 2749 -1.21 -0.084 2119 2507 0.012506 0.015095 D1 4 2 2594 -1.21 -0.082 yibF b3592 putative S-transferase Putative enzymes putative enzyme; Not classified b3593 -29 -58 1.00 0.000 -28 -73 1.00 0.000 -44 -50 -0.000258 -0.000304 D1 3 3 4034 1.00 0.000 rhsA b3593 rhsA protein in rhs element "Hypothetical, unclassified, unknown" orf; Transposon-related functions b3594 3522 2857 1.23 0.091 3710 3011 1.23 0.091 3190 3361 0.018822 0.020234 F1 3 3 4035 -1.08 -0.031 yibA b3594 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3595 692 739 -1.07 -0.029 440 454 -1.00 0.000 716 447 0.004222 0.002692 H1 3 3 4036 1.41 0.148 yibJ b3595 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3596 2823 2737 1.03 0.013 2272 1299 1.75 0.243 2780 1786 0.016404 0.010750 J1 3 3 4037 1.53 0.184 yibG b3596 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3597 331 288 1.00 0.000 133 215 -1.00 0.000 310 174 0.001829 0.001047 K12 3 1 622 1.00 0.000 yibH b3597 putative membrane protein putative membrane protein putative membrane; Not classified b3598 1059 802 1.32 0.121 589 427 1.18 0.071 930 508 0.005489 0.003057 L1 3 3 4038 1.80 0.254 yibI b3598 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3599 3155 3772 -1.20 -0.078 2021 1927 1.05 0.021 3463 1974 0.020436 0.011884 H21 1 1 852 1.72 0.235 mtlA b3599 "PTS system, mannitol-specific enzyme IIABC components" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3600 357 444 -1.00 0.000 301 262 1.00 0.000 401 282 0.002364 0.001695 O1 2 1 104 1.00 0.000 mtlD b3600 mannitol-1-phosphate dehydrogenase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3601 499 799 -1.60 -0.204 287 220 1.00 0.000 649 254 0.003832 0.001527 A3 2 1 105 1.28 0.106 mtlR b3601 repressor for mtl Regulatory function regulator; Degradation of small molecules: Carbon compounds b3602 2930 3011 -1.03 -0.012 4285 4929 -1.15 -0.061 2970 4607 0.017527 0.027738 N1 3 3 4039 -1.58 -0.199 yibL b3602 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3603 919 1021 -1.11 -0.046 789 727 1.08 0.035 970 758 0.005723 0.004565 J21 1 1 853 1.25 0.098 lldP b3603 L-lactate permease Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3604 1802 1794 1.00 0.002 572 963 -1.68 -0.226 1798 768 0.010610 0.004623 J4 4 1 1453 2.30 0.361 lldR b3604 transcriptional regulator Regulatory function "regulator; Energy metabolism, carbon: Aerobic respiration" b3605 29650 26632 1.11 0.047 17226 17934 -1.04 -0.017 28141 17580 0.166052 0.105839 L4 4 1 1454 1.57 0.196 lldD b3605 L-lactate dehydrogenase Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b3606 3985 4323 -1.08 -0.035 5828 5400 1.08 0.033 4154 5614 0.024509 0.033800 F12 2 3 4040 -1.38 -0.140 yibK b3606 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3607 894 812 1.10 0.042 862 907 -1.05 -0.022 853 885 0.005035 0.005325 I6 1 2 1941 -1.06 -0.024 cysE b3607 serine acetyltransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Cysteine b3608 17232 16907 1.02 0.008 9322 10047 -1.08 -0.033 17070 9685 0.100723 0.058307 N4 4 1 1455 1.73 0.237 gpsA b3608 glycerol-3-phosphate dehydrogenase (NAD+) Energy metabolism "enzyme; Energy metabolism, carbon: Aerobic respiration" b3609 2638 1931 1.37 0.136 2978 2967 1.00 0.002 2284 2973 0.013479 0.017897 L21 1 1 854 -1.33 -0.123 secB b3609 protein export; molecular chaperone; may bind to signel sequence Transport and binding proteins "transport; Protein, peptide secretion" b3610 1824 1430 1.28 0.106 1293 1249 1.03 0.015 1627 1271 0.009599 0.007654 L13 1 2 2358 1.25 0.098 grxC b3610 glutaredoxin 3 "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b3611 2426 2210 1.10 0.040 2676 2728 -1.02 -0.008 2318 2702 0.013679 0.016269 B3 3 3 4041 -1.19 -0.075 yibN b3611 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3612 4350 3799 1.14 0.059 4871 4786 1.02 0.008 4074 4829 0.024041 0.029071 D3 3 3 4042 -1.21 -0.083 yibO b3612 "putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase" Putative enzymes putative enzyme; Not classified b3613 1755 1583 1.11 0.045 612 815 -1.33 -0.124 1669 714 0.009849 0.004296 G16 2 1 540 2.29 0.360 yibP b3613 putative membrane protein putative membrane protein putative membrane; Not classified b3614 4117 2907 1.42 0.151 2932 3113 -1.06 -0.026 3512 3023 0.020723 0.018198 F3 3 3 4043 1.14 0.056 yibQ b3614 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3615 392 634 -1.27 -0.103 375 432 -1.00 0.000 513 404 0.003027 0.002431 I16 2 1 541 1.01 0.004 yibD b3615 putative regulator Putative regulatory proteins putative regulator; Not classified b3616 1699 1491 1.14 0.057 3416 3517 -1.03 -0.013 1595 3467 0.009411 0.020871 K6 1 2 1942 -2.22 -0.346 tdh b3616 threonine dehydrogenase Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b3617 4206 4020 1.05 0.020 5063 5926 -1.17 -0.068 4113 5494 0.024269 0.033080 A10 4 2 2241 -1.36 -0.135 kbl b3617 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3618 995 757 1.31 0.119 972 749 1.30 0.113 876 861 0.005168 0.005182 H3 3 3 4044 -1.00 -0.001 htrL b3618 involved in lipopolysaccharide biosynthesis "Hypothetical, unclassified, unknown" phenotype; Not classified b3619 4491 5065 -1.13 -0.052 3641 3949 -1.08 -0.035 4778 3795 0.028193 0.022846 K16 2 1 542 1.23 0.091 rfaD b3619 ADP-L-glycero-D-mannoheptose-6-epimerase Cell structure enzyme; Surface polysaccharides & antigens b3620 594 1019 -1.71 -0.234 525 1399 -2.67 -0.426 807 962 0.004759 0.005792 M16 2 1 543 -1.22 -0.085 rfaF b3620 ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis Cell structure putative enzyme; Macromolecule metabolism: Lipopolysaccharide b3621 327 584 -1.17 -0.067 345 324 1.00 0.000 455 334 0.002687 0.002012 O16 2 1 544 1.00 0.000 rfaC b3621 heptosyl transferase I; lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3622 105 120 -1.00 0.000 149 42 1.00 0.000 112 95 0.000662 0.000573 A18 2 1 545 1.00 0.000 rfaL b3622 O-antigen ligase; lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3623 481 858 -1.72 -0.234 792 692 1.14 0.058 669 742 0.003949 0.004468 C18 2 1 546 -1.13 -0.054 rfaK b3623 probably hexose transferase; lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3624 2512 2733 -1.09 -0.037 1738 2026 -1.17 -0.067 2622 1882 0.015474 0.011331 E18 2 1 547 1.37 0.135 rfaZ b3624 lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3625 9997 13037 -1.30 -0.115 10446 13077 -1.25 -0.098 11517 11762 0.067959 0.070811 G18 2 1 548 -1.04 -0.018 rfaY b3625 lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3626 200 441 -1.00 0.000 449 533 -1.07 -0.027 321 491 0.001892 0.002955 I18 2 1 549 -1.00 0.000 rfaJ b3626 UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase Cell structure enzyme; Surface polysaccharides & antigens b3627 366 287 1.00 0.000 386 432 -1.00 0.000 326 409 0.001924 0.002461 K18 2 1 550 -1.00 0.000 rfaI b3627 "UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase" Cell structure enzyme; Surface polysaccharides & antigens b3628 732 795 -1.09 -0.036 602 605 -1.00 -0.002 764 604 0.004507 0.003635 M18 2 1 551 1.24 0.093 rfaB b3628 "UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase" Cell structure enzyme; Surface polysaccharides & antigens b3629 -66 54 -1.00 0.000 271 343 -1.00 0.000 -6 307 -0.000034 0.001847 O18 2 1 552 -1.00 0.000 rfaS b3629 lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3630 808 1010 -1.25 -0.097 1024 1808 -1.77 -0.247 909 1416 0.005365 0.008526 A20 2 1 553 -1.59 -0.201 rfaP b3630 lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3631 396 289 1.00 0.000 505 510 -1.01 -0.004 342 507 0.002020 0.003055 C20 2 1 554 -1.02 -0.008 rfaG b3631 glucosyltransferase I; lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3632 1192 1280 -1.07 -0.031 1053 1365 -1.30 -0.113 1236 1209 0.007296 0.007276 E20 2 1 555 1.00 0.001 rfaQ b3632 lipopolysaccharide core biosynthesis Cell structure enzyme; Macromolecule metabolism: Lipopolysaccharide b3633 1156 993 1.16 0.066 1513 1844 -1.22 -0.086 1074 1678 0.006340 0.010104 G20 2 1 556 -1.59 -0.202 kdtA b3633 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) Cell structure enzyme; Surface polysaccharides & antigens b3634 359 505 -1.01 -0.004 222 291 -1.00 0.000 432 257 0.002548 0.001545 I20 2 1 557 1.00 0.000 kdtB b3634 putative enzyme of lipopolysaccharide synthesis Putative enzymes putative enzyme; Not classified b3635 523 424 1.05 0.019 342 241 1.00 0.000 473 292 0.002793 0.001755 G11 1 2 1580 1.00 0.000 mutM b3635 formamidopyrimidine DNA glycosylase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3636 12132 12143 -1.00 0.000 18711 16795 1.11 0.047 12137 17753 0.071618 0.106885 M21 3 2 1815 -1.49 -0.174 rpmG b3636 50S ribosomal subunit protein L33 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3637 4446 3504 1.27 0.103 12680 12979 -1.02 -0.010 3975 12829 0.023455 0.077240 O21 3 2 1816 -3.29 -0.518 rpmB b3637 50S ribosomal subunit protein L28 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3638 1426 1463 -1.03 -0.011 1270 1220 1.04 0.018 1444 1245 0.008524 0.007494 D20 1 1 1226 1.14 0.056 radC b3638 DNA repair protein "DNA replication, repair, restriction/modification" phenotype; Not classified b3639 653 650 1.00 0.002 1033 1035 -1.00 -0.001 651 1034 0.003843 0.006224 I11 1 2 1581 -1.62 -0.209 dfp b3639 flavoprotein affecting synthesis of DNA and pantothenate metabolism "DNA replication, repair, restriction/modification" "phenotype; DNA - replication, repair, restriction/modification" b3640 365 577 -1.15 -0.062 794 1144 -1.44 -0.159 471 969 0.002778 0.005836 O2 2 2 2024 -1.95 -0.289 dut b3640 deoxyuridinetriphosphatase Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b3641 1295 1177 1.10 0.041 1781 1615 1.10 0.043 1236 1698 0.007294 0.010225 J3 3 3 4045 -1.40 -0.147 ttk b3641 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3642 230 617 -1.23 -0.092 174 377 -1.00 0.000 424 275 0.002500 0.001658 A4 2 2 2025 1.00 0.000 pyrE b3642 orotate phosphoribosyltransferase Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b3643 1128 1070 1.05 0.023 1187 1315 -1.11 -0.044 1099 1251 0.006486 0.007533 K11 1 2 1582 -1.16 -0.065 rph b3643 RNase PH "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b3644 1312 1298 1.01 0.005 1200 886 1.35 0.132 1305 1043 0.007703 0.006282 M12 3 1 623 1.23 0.089 yicC b3644 putative alpha helix protein "Hypothetical, unclassified, unknown" phenotype; Not classified b3645 266 113 1.00 0.000 294 130 1.00 0.000 189 212 0.001117 0.001277 M11 1 2 1583 -1.00 0.000 dinD b3645 DNA-damage-inducible protein "DNA replication, repair, restriction/modification" "phenotype; DNA - replication, repair, restriction/modification" b3646 3605 2649 1.36 0.134 4413 4093 1.08 0.033 3127 4253 0.018454 0.025605 L3 3 3 4046 -1.39 -0.142 yicG b3646 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3647 1423 1130 1.26 0.100 1019 1159 -1.14 -0.056 1276 1089 0.007530 0.006556 F1 4 2 2595 1.15 0.060 yicF b3647 putative enzyme Putative enzymes putative enzyme; Not classified b3648 257 993 -1.99 -0.298 2614 2811 -1.08 -0.032 625 2713 0.003687 0.016333 C4 2 2 2026 -4.43 -0.646 gmk b3648 guanylate kinase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b3649 982 1417 -1.44 -0.159 1941 1947 -1.00 -0.001 1199 1944 0.007076 0.011704 M5 2 2 1655 -1.65 -0.219 rpoZ b3649 "RNA polymerase, omega subunit" "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b3650 2066 2217 -1.07 -0.030 2379 2686 -1.13 -0.053 2142 2533 0.012637 0.015247 C17 2 1 162 -1.21 -0.082 spoT b3650 "(p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase" Regulatory function enzyme; Global regulatory functions b3651 3302 3690 -1.12 -0.048 2484 2704 -1.09 -0.037 3496 2594 0.020631 0.015617 O5 2 2 1656 1.32 0.121 spoU b3651 putative RNA methylase Putative enzymes putative enzyme; Not classified b3652 2376 2483 -1.04 -0.019 2444 1895 1.29 0.110 2429 2170 0.014335 0.013062 O11 1 2 1584 1.10 0.040 recG b3652 "DNA helicase, resolution of Holliday junctions, branch migration" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3653 1053 1017 1.04 0.015 1130 1145 -1.01 -0.006 1035 1138 0.006105 0.006849 N21 1 1 855 -1.12 -0.050 gltS b3653 glutamate transport Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3654 3737 2921 1.28 0.107 2772 2795 -1.01 -0.004 3329 2783 0.019644 0.016758 N17 3 1 1031 1.17 0.069 yicE b3654 putative transport protein Putative transport proteins putative transport; Not classified b3655 7358 6693 1.10 0.041 5469 5383 1.02 0.007 7026 5426 0.041457 0.032666 N3 3 3 4047 1.27 0.103 yicH b3655 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3656 5161 4209 1.23 0.089 7390 7573 -1.02 -0.011 4685 7482 0.027647 0.045043 P3 3 3 4048 -1.63 -0.212 yicI b3656 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3657 3252 3385 -1.04 -0.017 1655 1564 1.06 0.025 3318 1609 0.019580 0.009689 P17 3 1 1032 2.02 0.306 yicJ b3657 putative permease Putative transport proteins putative transport; Not classified b3659 1941 1897 1.02 0.010 2084 1889 1.10 0.043 1919 1987 0.011323 0.011961 B5 3 3 4049 -1.06 -0.024 yicK b3659 two-module transport protein Putative transport proteins putative transport; Not classified b3660 3714 3651 1.02 0.007 3645 3057 1.19 0.076 3682 3351 0.021729 0.020176 B19 3 1 1033 1.08 0.032 yicL b3660 putative permease transporter Putative transport proteins putative transport; Not classified b3661 11087 10657 1.04 0.017 10204 10368 -1.02 -0.007 10872 10286 0.064154 0.061927 G4 3 1 588 1.04 0.015 nlpA b3661 lipoprotein-28 Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b3662 4035 3712 1.09 0.036 3716 3108 1.20 0.078 3874 3412 0.022858 0.020543 E23 3 1 283 1.11 0.046 yicM b3662 putative transport protein Putative transport proteins putative transport; Not classified b3663 1310 830 1.58 0.198 2268 2611 -1.15 -0.061 1070 2439 0.006315 0.014686 D5 3 3 4050 -2.33 -0.367 yicN b3663 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3664 3234 2876 1.12 0.051 2620 2434 1.08 0.032 3055 2527 0.018027 0.015213 F5 3 3 4051 1.18 0.074 yicO b3664 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3665 6830 4405 1.55 0.190 4876 5528 -1.13 -0.054 5618 5202 0.033150 0.031319 H5 3 3 4052 1.06 0.025 yicP b3665 probable adenine deaminase (synthesis xanthine) Putative enzymes putative enzyme; Purine ribonucleotide biosynthesis b3666 1039 716 1.45 0.162 828 868 -1.05 -0.020 877 848 0.005176 0.005105 P21 1 1 856 1.01 0.006 uhpT b3666 hexose phosphate transport protein Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3667 12642 9673 1.31 0.116 16024 16493 -1.03 -0.013 11158 16259 0.065838 0.097886 B23 1 1 857 -1.49 -0.172 uhpC b3667 regulator of uhpT Regulatory function "regulator; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3668 1359 1447 -1.06 -0.027 962 859 1.12 0.049 1403 910 0.008281 0.005481 D23 1 1 858 1.51 0.179 uhpB b3668 sensor histidine protein kinase phosphorylates UhpA Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3669 2771 2810 -1.01 -0.006 3808 4284 -1.12 -0.051 2791 4046 0.016467 0.024360 F23 1 1 859 -1.48 -0.170 uhpA b3669 "response regulator, positive activator of uhpT transcription (sensor, uhpB)" Regulatory function "regulator; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3670 371 320 1.00 0.000 124 155 -1.00 0.000 345 140 0.002039 0.000842 M6 1 2 1943 1.00 0.000 ilvN b3670 "acetolactate synthase I, valine sensitive, small subunit" Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3671 2521 1971 1.28 0.107 1780 1588 1.12 0.050 2246 1684 0.013253 0.010136 O6 1 2 1944 1.31 0.116 ilvB b3671 "acetolactate synthase I,valine-sensitive, large subunit" Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3672 543 345 1.09 0.036 300 302 -1.00 0.000 444 301 0.002620 0.001813 J5 3 3 4053 1.00 0.000 ivbL b3672 ilvB operon leader peptide Amino acid biosynthesis "leader; Amino acid biosynthesis: Isoleucine, Valine" b3673 1443 1109 1.30 0.114 1822 1918 -1.05 -0.022 1276 1870 0.007532 0.011258 F20 1 1 1227 -1.49 -0.175 emrD b3673 2-module integral membrane pump; multidrug resistance Cell processes transport; Drug/analog sensitivity b3674 1559 1138 1.37 0.136 1353 1013 1.34 0.126 1349 1183 0.007957 0.007121 G23 3 1 284 1.12 0.048 yidF b3674 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3675 543 479 1.09 0.036 606 626 -1.03 -0.014 511 616 0.003016 0.003710 L5 3 3 4054 -1.23 -0.090 yidG b3675 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3676 2009 1939 1.04 0.015 1832 1573 1.16 0.066 1974 1702 0.011649 0.010249 N5 3 3 4055 1.14 0.056 yidH b3676 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3677 3319 3332 -1.00 -0.002 5181 4853 1.07 0.028 3325 5017 0.019621 0.030207 P5 3 3 4056 -1.54 -0.187 yidI b3677 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3678 690 774 -1.12 -0.049 683 836 -1.22 -0.088 732 760 0.004320 0.004576 H1 4 2 2596 -1.06 -0.025 yidJ b3678 putative sulfatase Putative enzymes putative enzyme; Not classified b3679 2496 2325 1.07 0.031 2754 2754 -1.00 0.000 2411 2754 0.014225 0.016582 D19 3 1 1034 -1.17 -0.067 yidK b3679 putative cotransporter Putative transport proteins putative transport; Not classified b3680 692 1273 -1.84 -0.265 484 858 -1.72 -0.235 983 671 0.005798 0.004040 I23 3 1 285 1.43 0.157 yidL b3680 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b3681 3386 2685 1.26 0.101 2048 1866 1.10 0.040 3035 1957 0.017911 0.011784 H23 1 1 860 1.52 0.182 glvG b3681 probable 6-phospho-beta-glucosidase Putative enzymes "putative enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3682 1099 945 1.16 0.065 862 736 1.17 0.069 1022 799 0.006032 0.004811 J23 1 1 861 1.25 0.098 glvB b3682 "PTS system, arbutin-like IIB component" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3683 29419 27174 1.08 0.034 41684 40886 1.02 0.008 28296 41285 0.166969 0.248558 L23 1 1 862 -1.49 -0.173 glvC b3683 "PTS system, arbutin-like IIC component" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3684 381 268 1.00 0.000 521 680 -1.31 -0.116 325 600 0.001915 0.003614 K23 3 1 286 -1.20 -0.081 yidP b3684 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3685 2691 1291 2.08 0.319 2639 2457 1.07 0.031 1991 2548 0.011749 0.015340 F19 3 1 1035 -1.31 -0.116 yidE b3685 putative transport protein Putative transport proteins putative transport; Not classified b3686 250 128 1.00 0.000 169 186 -1.00 0.000 189 177 0.001117 0.001067 H20 1 1 1228 1.00 0.000 ibpB b3686 heat shock protein Cell processes "factor; Adaptations, atypical conditions" b3687 3290 3233 1.02 0.008 4164 3893 1.07 0.029 3261 4029 0.019244 0.024254 J20 1 1 1229 -1.26 -0.100 ibpA b3687 heat shock protein Cell processes "factor; Adaptations, atypical conditions" b3688 796 730 1.09 0.037 530 442 1.06 0.026 763 486 0.004501 0.002928 B7 3 3 4057 1.50 0.176 yidQ b3688 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3689 1968 1391 1.41 0.151 1715 1558 1.10 0.042 1680 1637 0.009912 0.009854 D7 3 3 4058 1.01 0.003 yidR b3689 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3690 3145 2694 1.17 0.067 1970 1888 1.04 0.019 2920 1929 0.017229 0.011613 F7 3 3 4059 1.48 0.171 yidS b3690 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3691 909 873 1.04 0.018 716 742 -1.04 -0.015 891 729 0.005260 0.004389 H19 3 1 1036 1.20 0.079 dgoT b3691 D-galactonate transport Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3692 2503 2091 1.20 0.078 3029 3033 -1.00 -0.001 2297 3031 0.013554 0.018249 M23 3 1 287 -1.35 -0.129 dgoA b3692 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3693 1644 1417 1.16 0.064 1037 793 1.31 0.117 1531 915 0.009031 0.005508 H7 3 3 4060 1.64 0.215 dgoK b3693 2-oxo-3-deoxygalactonate kinase Carbon compound catabolism putative enzyme; Degradation of small molecules: Carbon compounds b3694 373 374 -1.00 0.000 366 492 -1.00 0.000 374 429 0.002205 0.002583 O23 3 1 288 -1.00 0.000 b3694 b3694 putative FADA-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3695 920 736 1.25 0.097 382 346 1.00 0.000 828 364 0.004886 0.002189 J7 3 3 4061 1.63 0.212 yidW b3695 regulator protein for dgo operon Putative regulatory proteins putative regulator; Not classified b3696 4497 7225 -1.61 -0.206 6564 6086 1.08 0.033 5861 6325 0.034587 0.038081 J1 4 2 2597 -1.10 -0.042 yidX b3696 putative replicase EC 2.7.- Putative enzymes putative enzyme; Not classified b3697 3393 3070 1.11 0.043 3784 3592 1.05 0.023 3231 3688 0.019067 0.022202 L7 3 3 4062 -1.16 -0.066 yidA b3697 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3698 584 344 1.17 0.067 476 462 1.00 0.000 464 469 0.002738 0.002823 N7 3 3 4063 -1.00 0.000 yidB b3698 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3699 8416 8388 1.00 0.001 5040 5262 -1.04 -0.019 8402 5151 0.049579 0.031013 A13 1 2 1585 1.60 0.204 gyrB b3699 "DNA gyrase subunit B, type II topoisomerase, ATPase activity" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3700 339 110 1.00 0.000 235 262 -1.00 0.000 225 249 0.001325 0.001497 C13 1 2 1586 -1.00 0.000 recF b3700 "ssDNA and dsDNA binding, ATP binding" Regulatory function "regulator; DNA - replication, repair, restriction/modification" b3701 239661 290767 -1.21 -0.084 434510 435438 -1.00 -0.001 265214 434974 1.564950 2.618786 E13 1 2 1587 -1.67 -0.224 dnaN b3701 "DNA polymerase III, beta-subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3702 1078 1239 -1.15 -0.060 1235 1257 -1.02 -0.008 1158 1246 0.006834 0.007503 G13 1 2 1588 -1.10 -0.041 dnaA b3702 DNA biosynthesis; initiation of chromosome replication; can be transcription regulator "DNA replication, repair, restriction/modification" "putative regulator; DNA - replication, repair, restriction/modification" b3703 6522 7479 -1.15 -0.059 18533 17508 1.06 0.025 7000 18020 0.041306 0.108491 A23 3 2 1817 -2.63 -0.419 rpmH b3703 50S ribosomal subunit protein L34 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3704 5686 4767 1.19 0.077 6722 6641 1.01 0.005 5227 6682 0.030842 0.040228 I13 1 2 1589 -1.30 -0.115 rnpA b3704 "RNase P, protein component; protein C5; processes tRNA, 4.5S RNA" "Transcription, RNA processing and degradation" enzyme; Degradation of RNA b3705 12349 13344 -1.08 -0.034 20016 19918 1.00 0.002 12847 19967 0.075804 0.120214 P7 3 3 4064 -1.59 -0.200 yidC b3705 60 KD inner-membrane protein Cell structure membrane; Inner membrane b3706 605 525 1.15 0.062 867 701 1.24 0.092 565 784 0.003333 0.004721 L20 1 1 1230 -1.42 -0.151 thdF b3706 GTP-binding protein in thiophene and furan oxidation Putative enzymes putative enzyme; Detoxification b3707 75 40 1.00 0.000 86 29 1.00 0.000 57 57 0.000337 0.000346 A8 1 2 1945 -1.00 0.000 tnaL b3707 tryptophanase leader peptide Carbon compound catabolism leader; Degradation of small molecules: Amino acids b3708 511 589 -1.15 -0.062 732 493 1.46 0.165 550 613 0.003243 0.003688 C8 1 2 1946 -1.14 -0.056 tnaA b3708 tryptophanase Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b3709 234 182 1.00 0.000 299 140 1.00 0.000 208 219 0.001228 0.001321 N23 1 1 863 -1.00 0.000 tnaB b3709 low affinity tryptophan permease Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b3710 801 864 -1.08 -0.033 449 606 -1.21 -0.084 833 528 0.004914 0.003176 H2 2 3 289 1.55 0.190 yidY b3710 putative transport protein Putative transport proteins putative transport; Not classified b3711 346 456 -1.00 0.000 190 224 -1.00 0.000 401 207 0.002367 0.001247 C1 4 1 290 1.00 0.000 yidZ b3711 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b3712 5404 4875 1.11 0.045 9885 9775 1.01 0.005 5140 9830 0.030328 0.059182 B9 3 3 4065 -1.95 -0.290 yieE b3712 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3713 1143 1030 1.11 0.045 674 414 1.35 0.130 1087 544 0.006413 0.003276 D9 3 3 4066 1.96 0.292 yieF b3713 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3714 1146 1152 -1.01 -0.002 995 901 1.10 0.043 1149 948 0.006783 0.005705 J19 3 1 1037 1.19 0.075 yieG b3714 putative membrane / transport protein Putative transport proteins putative transport; Not classified b3715 11245 11090 1.01 0.006 13181 13285 -1.01 -0.003 11167 13233 0.065896 0.079667 L1 4 2 2598 -1.21 -0.082 yieH b3715 putative phosphatase Putative enzymes putative enzyme; Not classified b3716 406 372 1.00 0.000 692 437 1.38 0.141 389 564 0.002294 0.003396 F9 3 3 4067 -1.13 -0.054 yieI b3716 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3717 2056 1811 1.14 0.055 2274 1924 1.18 0.072 1934 2099 0.011411 0.012637 H9 3 3 4068 -1.11 -0.044 yieJ b3717 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3718 5744 5864 -1.02 -0.009 4749 4648 1.02 0.009 5804 4698 0.034248 0.028285 N1 4 2 2599 1.21 0.083 yieK b3718 putative isomerase Putative enzymes putative enzyme; Not classified b3719 195 289 -1.00 0.000 223 239 -1.00 0.000 242 231 0.001428 0.001391 H8 2 3 2600 1.00 0.000 yieL b3719 putative xylanase Putative enzymes putative enzyme; Not classified b3720 5411 4423 1.22 0.088 4196 3150 1.33 0.125 4917 3673 0.029016 0.022114 J9 3 3 4069 1.31 0.118 yieC b3720 putative receptor protein putative membrane protein putative membrane; Not classified b3721 300 303 -1.00 0.000 -46 155 -1.00 0.000 302 55 0.001781 0.000328 C3 2 1 106 1.00 0.000 bglB b3721 phospho-beta-glucosidase B; cryptic Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3722 2978 3062 -1.03 -0.012 3128 3524 -1.13 -0.052 3020 3326 0.017818 0.020024 P23 1 1 864 -1.12 -0.051 bglF b3722 "PTS system beta-glucosides, enzyme II, cryptic" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3723 826 862 -1.04 -0.019 349 511 -1.02 -0.010 844 430 0.004979 0.002590 E3 2 1 107 1.66 0.220 bglG b3723 positive regulation of bgl operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b3724 47507 41250 1.15 0.061 14413 15942 -1.11 -0.044 44378 15177 0.261863 0.091376 E17 2 1 163 2.87 0.457 phoU b3724 negative regulator for pho regulon and putative enzyme in phosphate metabolism Regulatory function regulator; Global regulatory functions b3725 2187 1764 1.24 0.093 1906 1656 1.15 0.061 1975 1781 0.011657 0.010722 B1 2 1 865 1.09 0.036 pstB b3725 ATP-binding component of high-affinity phosphate-specific transport system Transport and binding proteins transport; Transport of small molecules: Anions b3726 458 430 1.00 0.000 112 131 -1.00 0.000 444 122 0.002618 0.000734 D1 2 1 866 1.00 0.000 pstA b3726 high-affinity phosphate-specific transport system Transport and binding proteins transport; Transport of small molecules: Anions b3727 2591 2931 -1.13 -0.053 1183 1940 -1.64 -0.215 2761 1562 0.016291 0.009402 F1 2 1 867 1.73 0.239 pstC b3727 "high-affinity phosphate-specific transport system, cytoplasmic membrane component" Transport and binding proteins transport; Transport of small molecules: Anions b3728 797 1017 -1.28 -0.106 614 762 -1.24 -0.094 907 688 0.005354 0.004142 H1 2 1 868 1.29 0.111 pstS b3728 high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein Transport and binding proteins transport; Transport of small molecules: Anions b3729 1829 2046 -1.12 -0.049 2604 2760 -1.06 -0.025 1937 2682 0.011432 0.016148 C10 4 2 2242 -1.41 -0.150 glmS b3729 L-glutamine:D-fructose-6-phosphate aminotransferase Central intermediary metabolism enzyme; Central intermediary metabolism: Amino sugars b3730 7830 8432 -1.08 -0.032 7035 8033 -1.14 -0.058 8131 7534 0.047977 0.045356 E10 4 2 2243 1.06 0.024 glmU b3730 N-acetyl glucosamine-1-phosphate uridyltransferase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3731 2998 3100 -1.03 -0.014 2686 2770 -1.03 -0.013 3049 2728 0.017992 0.016422 P4 4 1 1456 1.10 0.040 atpC b3731 "membrane-bound ATP synthase, F1 sector, epsilon-subunit" Energy metabolism enzyme; ATP-proton motive force interconversion b3732 10831 10140 1.07 0.029 9003 11902 -1.32 -0.121 10486 10452 0.061873 0.062928 B6 4 1 1457 -1.02 -0.007 atpD b3732 "membrane-bound ATP synthase, F1 sector, beta-subunit" Energy metabolism enzyme; ATP-proton motive force interconversion b3733 110850 99651 1.11 0.046 36206 36813 -1.02 -0.007 105251 36509 0.621053 0.219806 D6 4 1 1458 2.83 0.451 atpG b3733 "membrane-bound ATP synthase, F1 sector, gamma-subunit" Energy metabolism enzyme; ATP-proton motive force interconversion b3734 7813 6950 1.12 0.051 11902 12173 -1.02 -0.010 7382 12037 0.043556 0.072471 F6 4 1 1459 -1.66 -0.221 atpA b3734 "membrane-bound ATP synthase, F1 sector, alpha-subunit" Energy metabolism enzyme; ATP-proton motive force interconversion b3735 2348 2103 1.12 0.048 5451 4851 1.12 0.051 2226 5151 0.013133 0.031013 H6 4 1 1460 -2.36 -0.373 atpH b3735 "membrane-bound ATP synthase, F1 sector, delta-subunit" Energy metabolism enzyme; ATP-proton motive force interconversion b3736 7674 7827 -1.02 -0.009 8767 9557 -1.09 -0.037 7751 9162 0.045735 0.055161 J6 4 1 1461 -1.21 -0.081 atpF b3736 "membrane-bound ATP synthase, F0 sector, subunit b" Energy metabolism enzyme; ATP-proton motive force interconversion b3737 2916 3270 -1.12 -0.050 4109 4161 -1.01 -0.006 3093 4135 0.018250 0.024896 L6 4 1 1462 -1.36 -0.135 atpE b3737 "membrane-bound ATP synthase, F0 sector, subunit c" Energy metabolism enzyme; ATP-proton motive force interconversion b3738 3109 3658 -1.18 -0.071 5870 6027 -1.03 -0.011 3383 5949 0.019964 0.035815 N6 4 1 1463 -1.79 -0.254 atpB b3738 "membrane-bound ATP synthase, F0 sector, subunit a" Energy metabolism enzyme; ATP-proton motive force interconversion b3739 2776 2875 -1.04 -0.015 2315 2144 1.08 0.033 2826 2229 0.016673 0.013420 P6 4 1 1464 1.24 0.094 atpI b3739 "membrane-bound ATP synthase, dispensable protein, affects expression of atpB" Energy metabolism enzyme; ATP-proton motive force interconversion b3740 526 617 -1.17 -0.070 622 730 -1.17 -0.070 572 676 0.003374 0.004068 K13 1 2 1590 -1.21 -0.081 gidB b3740 glucose-inhibited division; chromosome replication? "Hypothetical, unclassified, unknown" "phenotype; DNA - replication, repair, restriction/modification" b3741 981 942 1.04 0.017 1578 1388 1.14 0.056 962 1483 0.005674 0.008929 M13 1 2 1591 -1.57 -0.197 gidA b3741 glucose-inhibited division; chromosome replication? "Hypothetical, unclassified, unknown" "phenotype; DNA - replication, repair, restriction/modification" b3742 1070 828 1.29 0.111 877 974 -1.11 -0.045 949 926 0.005600 0.005572 O13 1 2 1592 1.00 0.002 mioC b3742 initiation of chromosome replication "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b3743 195 114 1.00 0.000 228 83 1.00 0.000 154 156 0.000911 0.000937 E8 1 2 1947 -1.00 0.000 asnC b3743 "regulator for asnA, asnC and gidA" Regulatory function regulator; Amino acid biosynthesis: Asparagine b3744 435 586 -1.17 -0.069 586 727 -1.24 -0.094 510 656 0.003012 0.003952 G8 1 2 1948 -1.31 -0.118 asnA b3744 asparagine synthetase A Amino acid biosynthesis enzyme; Amino acid biosynthesis: Asparagine b3745 9948 10406 -1.05 -0.020 8238 7783 1.06 0.025 10177 8010 0.060053 0.048227 L9 3 3 4070 1.25 0.095 yieM b3745 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3746 13747 16355 -1.19 -0.075 16450 15746 1.04 0.019 15051 16098 0.088813 0.096920 N9 3 3 4071 -1.09 -0.038 yieN b3746 putative 2-component regulator Putative regulatory proteins putative regulator; Not classified b3747 491 642 -1.28 -0.108 403 584 -1.17 -0.068 566 494 0.003341 0.002973 J1 2 1 869 1.11 0.047 kup b3747 low affinity potassium transport system Transport and binding proteins transport; Transport of small molecules: Cations b3748 2179 4538 -2.08 -0.319 3128 3788 -1.21 -0.083 3358 3458 0.019817 0.020821 L1 2 1 870 -1.05 -0.021 rbsD b3748 D-ribose high-affinity transport system; membrane-associated protein Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3749 487 1122 -2.24 -0.351 603 929 -1.54 -0.188 804 766 0.004747 0.004611 N1 2 1 871 1.03 0.013 rbsA b3749 ATP-binding component of D-ribose high-affinity transport system Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3750 2598 2530 1.03 0.011 1851 2042 -1.10 -0.043 2564 1947 0.015131 0.011719 D4 2 3 872 1.29 0.111 rbsC b3750 D-ribose high-affinity transport system Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3751 1422 1419 1.00 0.001 664 773 -1.16 -0.066 1421 718 0.008383 0.004324 B3 2 1 873 1.94 0.287 rbsB b3751 D-ribose periplasmic binding protein Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3752 530 625 -1.18 -0.072 305 325 -1.00 0.000 578 315 0.003409 0.001895 G3 2 1 108 1.14 0.055 rbsK b3752 ribokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3753 922 1105 -1.20 -0.078 788 952 -1.21 -0.082 1014 870 0.005981 0.005235 I3 2 1 109 1.14 0.058 rbsR b3753 regulator for rbs operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b3754 2105 1934 1.09 0.037 1955 1878 1.04 0.017 2019 1916 0.011916 0.011538 L19 3 1 1038 1.03 0.014 yieO b3754 putative transport protein Putative transport proteins putative transport; Not classified b3755 1084 971 1.12 0.048 910 980 -1.08 -0.032 1028 945 0.006063 0.005689 P9 3 3 4072 1.07 0.028 yieP b3755 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3762 510 480 1.02 0.009 321 305 1.00 0.000 495 313 0.002922 0.001883 B11 3 3 4073 1.00 0.000 yifA b3762 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3763 2887 2103 1.37 0.138 1341 1616 -1.21 -0.081 2495 1478 0.014721 0.008901 K16 2 2 2078 1.65 0.218 pssR b3763 regulator of pssA Regulatory function "regulator; Macromolecule synthesis, modification: Phospholipids" b3764 2421 1967 1.23 0.090 2591 2676 -1.03 -0.014 2194 2633 0.012947 0.015853 D11 3 3 4074 -1.22 -0.088 yifE b3764 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3765 184 -25 1.00 0.000 666 660 1.01 0.004 80 663 0.000469 0.003990 C23 3 2 1818 -1.33 -0.124 yifB b3765 putative 2-component regulator Putative regulatory proteins putative regulator; Not classified b3766 8379 8506 -1.02 -0.007 6307 6783 -1.08 -0.032 8443 6545 0.049817 0.039405 I8 1 2 1949 1.26 0.102 ilvL b3766 ilvGEDA operon leader peptide Amino acid biosynthesis "leader; Amino acid biosynthesis: Isoleucine, Valine" b3767 2375 2196 1.08 0.034 764 613 1.25 0.096 2286 688 0.013487 0.004144 K8 1 2 1950 3.25 0.513 ilvG_1 b3767 "acetolactate synthase II, large subunit, cryptic, interrupted" Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3768 505 438 1.01 0.004 263 151 1.00 0.000 472 207 0.002784 0.001246 M8 1 2 1951 1.00 0.000 ilvG_2 b3768 "acetolactate synthase II, valine insensitive, large subunit, silent in K-12" Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3769 3722 3503 1.06 0.026 1511 1422 1.06 0.026 3612 1467 0.021315 0.008830 O8 1 2 1952 2.41 0.383 ilvM b3769 "acetolactate synthase II, valine insensitive, small subunit" Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3770 2425 1479 1.64 0.215 1243 847 1.47 0.167 1952 1045 0.011518 0.006291 A10 1 2 1953 1.83 0.263 ilvE b3770 branched-chain amino-acid aminotransferase Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3771 2375 1836 1.29 0.112 1211 1066 1.14 0.055 2105 1139 0.012423 0.006855 C10 1 2 1954 1.81 0.258 ilvD b3771 dihydroxyacid dehydratase Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3772 823 723 1.14 0.056 398 411 -1.00 0.000 773 405 0.004560 0.002436 E10 1 2 1955 1.52 0.182 ilvA b3772 threonine deaminase (dehydratase) Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3773 1797 1751 1.03 0.011 2084 1973 1.06 0.024 1774 2028 0.010468 0.012212 G10 1 2 1956 -1.17 -0.067 ilvY b3773 positive regulator for ilvC Regulatory function "regulator; Amino acid biosynthesis: Isoleucine, Valine" b3774 15913 16792 -1.06 -0.023 1624 1756 -1.08 -0.034 16353 1690 0.096493 0.010175 I10 1 2 1957 9.48 0.977 ilvC b3774 ketol-acid reductoisomerase Amino acid biosynthesis "enzyme; Amino acid biosynthesis: Isoleucine, Valine" b3775 6650 6247 1.06 0.027 9777 9607 1.02 0.008 6449 9692 0.038051 0.058350 E23 3 2 1819 -1.53 -0.186 ppiC b3775 peptidyl-prolyl cis-trans isomerase C (rotamase C) "Translation, post-translational modification" enzyme; Proteins - translation and modification b3776 582 595 -1.02 -0.010 654 459 1.31 0.117 588 557 0.003470 0.003351 F11 3 3 4075 1.04 0.015 b3776 b3776 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3777 2621 2500 1.05 0.021 3781 4016 -1.06 -0.026 2561 3898 0.015110 0.023470 H11 3 3 4076 -1.55 -0.191 yifN b3777 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3778 20595 21133 -1.03 -0.011 13482 15356 -1.14 -0.057 20864 14419 0.123113 0.086810 A15 1 2 1593 1.42 0.152 rep b3778 "rep helicase, a single-stranded DNA dependent ATPase" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3779 1677 1922 -1.15 -0.059 1521 1734 -1.14 -0.057 1799 1627 0.010618 0.009797 G17 2 1 164 1.08 0.035 gppA b3779 guanosine pentaphosphatase; exopolyphosphatase Regulatory function enzyme; Global regulatory functions b3780 5687 5930 -1.04 -0.018 6112 6157 -1.01 -0.003 5808 6134 0.034274 0.036933 A7 2 2 1657 -1.08 -0.032 rhlB b3780 putative ATP-dependent RNA helicase Putative enzymes putative enzyme; Not classified b3781 2317 2100 1.10 0.043 2316 2187 1.06 0.025 2209 2251 0.013032 0.013555 N13 1 2 2359 -1.04 -0.017 trxA b3781 thioredoxin 1 Nucleotide biosynthesis and metabolism "enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" b3782 2966 3817 -1.29 -0.109 3002 3212 -1.07 -0.029 3392 3107 0.020013 0.018706 C7 2 2 1658 1.07 0.029 rhoL b3782 rho operon leader peptide "Transcription, RNA processing and degradation" "leader; RNA synthesis, modification, DNA transcription" b3783 3553 5181 -1.46 -0.164 9894 10290 -1.04 -0.017 4367 10092 0.025770 0.060761 E7 2 2 1659 -2.36 -0.373 rho b3783 transcription termination factor Rho; polarity suppressor "Transcription, RNA processing and degradation" "factor; RNA synthesis, modification, DNA transcription" b3784 761 692 1.10 0.042 388 667 -1.33 -0.125 726 527 0.004287 0.003173 K20 2 1 558 1.35 0.131 rfe b3784 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase; synthesis of enterobacterial common antigen (ECA) Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3785 2114 1953 1.08 0.034 2903 3442 -1.19 -0.074 2033 3172 0.011999 0.019100 M20 2 1 559 -1.59 -0.202 wzzE b3785 putative transport protein Putative transport proteins putative transport; Not classified b3786 5065 5161 -1.02 -0.008 3540 3318 1.07 0.028 5113 3429 0.030170 0.020644 G10 4 2 2244 1.46 0.165 wecB b3786 UDP-N-acetyl glucosamine -2-epimerase; synthesis of enterobacterial common antigen (ECA) Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3787 4073 2913 1.40 0.146 4278 4052 1.06 0.024 3493 4165 0.020611 0.025075 I10 4 2 2245 -1.22 -0.085 wecC b3787 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA) Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3788 2142 2416 -1.13 -0.052 1774 1903 -1.07 -0.031 2279 1838 0.013449 0.011067 K10 4 2 2246 1.22 0.085 rffG b3788 "dTDP-glucose 4,6-dehydratase" Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3789 2863 2362 1.21 0.084 1932 1953 -1.01 -0.005 2612 1943 0.015413 0.011696 M10 4 2 2247 1.32 0.120 rffH b3789 glucose-1-phosphate thymidylyltransferase Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3790 1073 895 1.20 0.079 1721 1621 1.06 0.026 984 1671 0.005807 0.010061 J11 3 3 4077 -1.73 -0.239 wecD b3790 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3791 527 795 -1.51 -0.178 437 741 -1.48 -0.171 661 589 0.003901 0.003547 E1 4 1 291 1.10 0.041 wecE b3791 putative regulator Putative regulatory proteins putative regulator; Not classified b3792 5786 5979 -1.03 -0.014 3842 3885 -1.01 -0.005 5882 3863 0.034709 0.023260 B3 4 2 2601 1.49 0.174 wzxE b3792 putative cytochrome Putative enzymes putative carrier; Not classified b3793 5365 5808 -1.08 -0.035 5895 6830 -1.16 -0.064 5586 6362 0.032964 0.038304 O20 2 1 560 -1.16 -0.065 wecF b3793 TDP-Fuc4NAc:lipidII transferase; synthesis of enterobacterial common antigen (ECA) Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3794 6530 6031 1.08 0.035 6344 6420 -1.01 -0.005 6281 6382 0.037060 0.038422 A22 2 1 561 -1.04 -0.016 wecG b3794 probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA) Central intermediary metabolism "enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" b3795 5357 4879 1.10 0.041 3415 3404 1.00 0.001 5118 3410 0.030200 0.020527 N19 3 1 1039 1.47 0.168 yifK b3795 putative amino acid/amine transport protein Putative transport proteins putative transport; Not classified b3800 2413 2765 -1.15 -0.059 1062 1000 1.06 0.026 2589 1031 0.015274 0.006207 O10 4 2 2248 2.46 0.391 aslB b3800 putative arylsulfatase regulator Regulatory function regulator; Not classified b3801 568 425 1.14 0.055 550 483 1.10 0.041 496 516 0.002929 0.003109 A12 4 2 2249 -1.04 -0.016 aslA b3801 arylsulfatase Central intermediary metabolism enzyme; Central intermediary metabolism: Sulfur metabolism b3802 2254 2229 1.01 0.005 1524 1557 -1.02 -0.009 2242 1541 0.013228 0.009275 P13 1 2 2360 1.43 0.154 hemY b3802 a late step of protoheme IX synthesis "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3803 5435 4956 1.10 0.040 6301 5862 1.07 0.031 5195 6081 0.030657 0.036613 B15 1 2 2361 -1.19 -0.077 hemX b3803 uroporphyrinogen III methylase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3804 1520 1220 1.25 0.096 1112 1130 -1.02 -0.007 1370 1121 0.008085 0.006749 D15 1 2 2362 1.20 0.078 hemD b3804 uroporphyrinogen III synthase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3805 9425 8997 1.05 0.020 2448 2619 -1.07 -0.029 9211 2534 0.054354 0.015254 F15 1 2 2363 3.56 0.552 hemC b3805 porphobilinogen deaminase = hydroxymethylbilane synthase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3806 3307 3621 -1.09 -0.039 1346 1484 -1.10 -0.042 3464 1415 0.020441 0.008517 I17 2 1 165 2.40 0.380 cyaA b3806 adenylate cyclase Regulatory function enzyme; Global regulatory functions b3807 647 277 1.29 0.112 798 718 1.11 0.046 462 758 0.002726 0.004563 L11 3 3 4078 -1.52 -0.182 cyaY b3807 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3808 825 559 1.48 0.169 1130 1175 -1.04 -0.017 692 1153 0.004083 0.006941 N11 3 3 4079 -1.70 -0.230 b3808 b3808 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3809 1274 1053 1.21 0.083 1223 1076 1.14 0.056 1164 1149 0.006867 0.006918 K10 1 2 1958 -1.01 -0.003 dapF b3809 diaminopimelate epimerase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b3810 3853 3740 1.03 0.013 3605 3362 1.07 0.030 3796 3484 0.022401 0.020973 P11 3 3 4080 1.07 0.029 yigA b3810 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3811 10858 10087 1.08 0.032 7440 7567 -1.02 -0.007 10473 7504 0.061795 0.045177 C15 1 2 1594 1.37 0.136 xerC b3811 "site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division" Cell processes enzyme; Cell division b3812 1280 1590 -1.24 -0.094 621 970 -1.56 -0.194 1435 795 0.008469 0.004788 D3 4 2 2602 1.77 0.248 yigB b3812 putative phosphatase Putative enzymes putative enzyme; Not classified b3813 2520 1860 1.35 0.132 3152 2645 1.19 0.076 2190 2899 0.012923 0.017451 E15 1 2 1595 -1.35 -0.130 uvrD b3813 DNA-dependent ATPase I and helicase II "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3814 1849 1810 1.02 0.009 1586 1510 1.05 0.021 1829 1548 0.010794 0.009322 B13 3 3 4081 1.16 0.064 b3814 b3814 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3815 5968 6580 -1.10 -0.042 6433 6589 -1.02 -0.010 6274 6511 0.037022 0.039198 D13 3 3 4082 -1.06 -0.025 yigE b3815 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3816 1608 2112 -1.31 -0.118 2544 3172 -1.25 -0.096 1860 2858 0.010977 0.017207 D3 2 1 874 -1.57 -0.195 corA b3816 "Mg2+ transport, system I" Transport and binding proteins transport; Transport of small molecules: Cations b3817 318 242 1.00 0.000 233 205 1.00 0.000 280 219 0.001651 0.001320 F13 3 3 4083 1.00 0.000 yigF b3817 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3818 239 224 1.00 0.000 429 302 1.00 0.000 232 365 0.001367 0.002200 H13 3 3 4084 -1.00 0.000 yigG b3818 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3819 2318 2041 1.14 0.055 3512 3430 1.02 0.010 2179 3471 0.012860 0.020899 J13 3 3 4085 -1.63 -0.211 rarD b3819 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3820 1749 1458 1.20 0.079 3011 2786 1.08 0.034 1604 2899 0.009463 0.017452 L13 3 3 4086 -1.84 -0.266 yigI b3820 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3821 4630 4093 1.13 0.053 2875 2936 -1.02 -0.009 4362 2905 0.025736 0.017490 C12 4 2 2250 1.47 0.168 pldA b3821 outer membrane phospholipase A Fatty acid and phospholipid metabolism enzyme; Central intermediary metabolism: Phosphorus compounds b3822 4897 3907 1.25 0.098 5116 4849 1.06 0.023 4402 4982 0.025975 0.029997 G15 1 2 1596 -1.15 -0.063 recQ b3822 ATP-dependent DNA helicase "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3823 668 777 -1.16 -0.066 847 674 1.26 0.099 722 760 0.004263 0.004577 N13 3 3 4087 -1.07 -0.031 yigJ b3823 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3824 1855 1466 1.27 0.102 1953 1517 1.29 0.110 1660 1735 0.009797 0.010445 P13 3 3 4088 -1.07 -0.028 yigK b3824 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3825 2107 2687 -1.28 -0.106 1721 2352 -1.37 -0.136 2397 2036 0.014143 0.012260 E12 4 2 2251 1.15 0.062 pldB b3825 lysophospholipase L(2) Fatty acid and phospholipid metabolism enzyme; Central intermediary metabolism: Phosphorus compounds b3826 1314 1160 1.13 0.054 1144 1167 -1.02 -0.009 1237 1155 0.007299 0.006954 B15 3 3 4089 1.05 0.021 yigL b3826 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3827 1062 705 1.51 0.178 782 867 -1.11 -0.045 884 825 0.005215 0.004965 D15 3 3 4090 1.05 0.021 yigM b3827 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3828 2211 1948 1.14 0.055 1846 1790 1.03 0.013 2079 1818 0.012269 0.010944 M10 1 2 1959 1.12 0.050 metR b3828 regulator for metE and metH Regulatory function regulator; Amino acid biosynthesis: Methionine b3829 15105 16596 -1.10 -0.041 4962 4881 1.02 0.007 15850 4922 0.093528 0.029632 O10 1 2 1960 3.16 0.499 metE b3829 tetrahydropteroyltriglutamate methyltransferase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Methionine b3830 5885 5761 1.02 0.009 911 616 1.48 0.170 5823 764 0.034360 0.004598 F3 4 2 2603 7.47 0.874 ysgA b3830 putative enzyme Putative enzymes putative enzyme; Not classified b3831 1331 2986 -2.24 -0.351 2798 3006 -1.07 -0.031 2158 2902 0.012735 0.017472 E4 2 2 2027 -1.37 -0.137 udp b3831 uridine phosphorylase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b3832 403 153 1.00 0.000 267 284 -1.00 0.000 278 276 0.001642 0.001661 O12 3 1 624 -1.00 0.000 yigN b3832 putative alpha helix chain "Hypothetical, unclassified, unknown" phenotype; Not classified b3833 810 720 1.12 0.051 1058 805 1.31 0.119 765 931 0.004514 0.005607 F15 3 3 4091 -1.24 -0.094 ubiE b3833 "2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b3834 7176 4811 1.49 0.174 4139 4085 1.01 0.006 5994 4112 0.035368 0.024756 H15 3 3 4092 1.43 0.155 yigP b3834 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3835 919 962 -1.05 -0.020 1054 1089 -1.03 -0.014 941 1072 0.005551 0.006453 J15 3 3 4093 -1.16 -0.065 yigR b3835 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3836 6139 5606 1.10 0.039 5731 5978 -1.04 -0.018 5873 5855 0.034654 0.035249 L15 3 3 4094 -1.02 -0.007 b3836 b3836 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3837 3330 2744 1.21 0.084 2057 2151 -1.05 -0.019 3037 2104 0.017921 0.012668 N15 3 3 4095 1.41 0.151 b3837 b3837 putative histone Putative factors putative factor; Not classified b3838 1586 1352 1.17 0.069 2187 2175 1.01 0.002 1469 2181 0.008669 0.013130 P15 3 3 4096 -1.51 -0.180 b3838 b3838 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3839 1804 1253 1.44 0.158 1516 1896 -1.25 -0.097 1529 1706 0.009021 0.010269 B17 3 3 4097 -1.14 -0.056 yigU b3839 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3840 933 791 1.18 0.072 1677 1479 1.13 0.055 862 1578 0.005086 0.009499 D17 3 3 4098 -1.87 -0.271 yigW_1 b3840 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3841 640 480 1.28 0.107 535 495 1.07 0.029 560 515 0.003306 0.003101 F17 3 3 4099 1.07 0.028 yigW_2 b3841 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3842 829 1443 -1.74 -0.241 2269 2747 -1.21 -0.083 1136 2508 0.006702 0.015102 C22 2 1 562 -2.25 -0.353 rfaH b3842 "transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin" Regulatory function regulator; Macromolecule metabolism: Lipopolysaccharide b3843 2490 3110 -1.25 -0.096 2851 2942 -1.03 -0.014 2800 2897 0.016522 0.017440 H17 3 3 4100 -1.06 -0.023 yigC b3843 putative oxidoreductase Putative enzymes putative enzyme; Not classified b3844 5114 4946 1.03 0.015 3211 3236 -1.01 -0.003 5030 3224 0.029681 0.019408 B8 4 1 1465 1.53 0.184 ubiB b3844 ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase) Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b3845 2429 2715 -1.12 -0.048 765 851 -1.11 -0.046 2572 808 0.015176 0.004864 M16 2 2 2079 3.12 0.494 fadA b3845 thiolase I; 3-ketoacyl-CoA thiolase; acetyl-CoA transferase Fatty acid and phospholipid metabolism enzyme; Degradation of small molecules: Fatty acids b3846 1997 2974 -1.49 -0.173 3355 5034 -1.50 -0.176 2486 4194 0.014668 0.025252 O16 2 2 2080 -1.72 -0.236 fadB b3846 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase Fatty acid and phospholipid metabolism enzyme; Degradation of small molecules: Fatty acids b3847 18955 17144 1.11 0.044 22137 22286 -1.01 -0.003 18050 22211 0.106505 0.133725 G23 3 2 1820 -1.26 -0.099 pepQ b3847 proline dipeptidase Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b3848 2257 1650 1.37 0.136 2045 1834 1.11 0.047 1953 1940 0.011525 0.011678 H3 4 2 2604 -1.01 -0.006 yigZ b3848 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3849 1204 1899 -1.58 -0.198 877 1584 -1.81 -0.257 1551 1231 0.009154 0.007408 F3 2 1 875 1.24 0.092 trkH b3849 "potassium uptake, requires TrkE" Transport and binding proteins transport; Transport of small molecules: Cations b3850 14810 12624 1.17 0.069 20231 19712 1.03 0.011 13717 19971 0.080940 0.120239 J17 3 3 4101 -1.49 -0.172 hemG b3850 protoporphyrin oxidase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3856 2088 1923 1.09 0.036 1256 1529 -1.22 -0.085 2005 1392 0.011834 0.008383 L17 3 3 4102 1.41 0.150 mobB b3856 molybdopterin-guanine dinucleotide biosynthesis protein B Central intermediary metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b3857 3196 3499 -1.09 -0.039 1657 1562 1.06 0.026 3348 1610 0.019755 0.009690 H15 1 2 2364 2.04 0.309 mobA b3857 "molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" b3858 834 698 1.19 0.077 1125 1351 -1.20 -0.080 766 1238 0.004520 0.007453 N17 3 3 4103 -1.65 -0.217 yihD b3858 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3859 9643 9396 1.03 0.011 10041 8958 1.12 0.050 9520 9499 0.056173 0.057191 P17 3 3 4104 -1.02 -0.008 yihE b3859 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3860 7107 4233 1.68 0.225 11140 10409 1.07 0.029 5670 10775 0.033457 0.064870 I23 3 2 1821 -1.94 -0.288 dsbA b3860 "protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction" "Translation, post-translational modification" enzyme; Proteins - translation and modification b3861 6881 5651 1.22 0.086 5791 5655 1.02 0.010 6266 5723 0.036973 0.034455 B19 3 3 4105 1.07 0.031 yihF b3861 putative GTP-binding protein "Hypothetical, unclassified, unknown" orf; Not classified b3862 1849 2074 -1.12 -0.050 3691 3646 1.01 0.005 1962 3669 0.011576 0.022088 J3 4 2 2605 -1.91 -0.281 yihG b3862 putative endonuclease Putative enzymes putative enzyme; Not classified b3863 2840 3347 -1.18 -0.071 1106 1414 -1.28 -0.107 3093 1260 0.018253 0.007587 I15 1 2 1597 2.41 0.381 polA b3863 "DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5' exonuclease" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b3865 7039 5790 1.22 0.085 4884 4804 1.02 0.007 6414 4844 0.037849 0.029163 D19 3 3 4106 1.30 0.113 yihA b3865 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3866 3265 2329 1.40 0.147 2690 2996 -1.11 -0.047 2797 2843 0.016503 0.017114 F19 3 3 4107 -1.04 -0.016 yihI b3866 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3867 998 1283 -1.29 -0.109 1562 1477 1.06 0.024 1140 1519 0.006729 0.009147 J15 1 2 2365 -1.36 -0.133 hemN b3867 O2-independent coproporphyrinogen III oxidase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3868 1336 1279 1.04 0.019 994 1080 -1.09 -0.036 1307 1037 0.007713 0.006244 A12 1 2 1961 1.24 0.092 glnG b3868 "response regulator for gln (sensor glnL) (nitrogen regulator I, NRI)" Regulatory function regulator; Amino acid biosynthesis: Glutamine b3869 798 803 -1.01 -0.003 595 554 1.07 0.031 801 575 0.004725 0.003459 C12 1 2 1962 1.37 0.135 glnL b3869 "histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII)" Regulatory function enzyme; Amino acid biosynthesis: Glutamine b3870 2896 3209 -1.11 -0.045 4999 7400 -1.48 -0.170 3052 6200 0.018010 0.037325 E12 1 2 1963 -2.07 -0.316 glnA b3870 glutamine synthetase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Glutamine b3871 4582 4297 1.07 0.028 6147 6165 -1.00 -0.001 4439 6156 0.026194 0.037061 K23 3 2 1822 -1.41 -0.151 yihK b3871 putative GTP-binding factor Putative factors putative factor; Not classified b3872 211 174 1.00 0.000 326 34 1.00 0.000 193 180 0.001137 0.001085 H19 3 3 4108 1.00 0.000 yihL b3872 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3873 1016 1102 -1.08 -0.035 1032 886 1.16 0.066 1059 959 0.006248 0.005774 J19 3 3 4109 1.08 0.034 yihM b3873 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3874 12905 12239 1.05 0.023 9957 10131 -1.02 -0.008 12572 10044 0.074182 0.060472 P19 3 1 1040 1.23 0.089 yihN b3874 putative resistance protein (transport) Putative transport proteins putative transport; Drug/analog sensitivity b3875 2513 2171 1.16 0.064 1724 1495 1.15 0.062 2342 1610 0.013817 0.009692 L19 3 3 4110 1.43 0.154 yshA b3875 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3876 4546 4391 1.04 0.015 5708 5712 -1.00 0.000 4469 5710 0.026368 0.034376 B21 3 1 1041 -1.30 -0.115 yihO b3876 putative permease Putative transport proteins putative transport; Not classified b3877 2254 1906 1.18 0.073 2082 2056 1.01 0.006 2080 2069 0.012274 0.012455 D21 3 1 1042 -1.01 -0.006 yihP b3877 putative permease Putative transport proteins putative transport; Not classified b3878 1451 1527 -1.05 -0.022 1638 1406 1.17 0.066 1489 1522 0.008785 0.009165 L3 4 2 2606 -1.04 -0.018 yihQ b3878 putative glycosidase Putative enzymes putative enzyme; Not classified b3879 438 522 -1.04 -0.018 230 522 -1.04 -0.019 480 376 0.002830 0.002263 N3 4 2 2607 1.00 0.000 yihR b3879 putative aldose-1-epimerase (EC 5.1.3.3) Putative enzymes putative enzyme; Not classified b3880 943 468 1.89 0.275 1209 990 1.22 0.087 705 1099 0.004160 0.006619 N19 3 3 4111 -1.59 -0.202 yihS b3880 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3881 1185 1243 -1.05 -0.021 755 648 1.17 0.066 1214 702 0.007164 0.004226 P3 4 2 2608 1.70 0.229 yihT b3881 putative aldolase Putative enzymes putative enzyme; Not classified b3882 1026 627 1.63 0.214 682 825 -1.21 -0.083 827 753 0.004878 0.004535 B5 4 2 2609 1.08 0.032 yihU b3882 putative dehydrogenase Putative enzymes putative enzyme; Not classified b3883 1051 976 1.08 0.032 719 727 -1.01 -0.004 1014 723 0.005982 0.004354 D5 4 2 2610 1.37 0.138 yihV b3883 putative kinase Putative enzymes putative enzyme; Not classified b3884 1149 885 1.30 0.114 956 949 1.01 0.004 1017 953 0.006001 0.005735 G1 4 1 292 1.05 0.020 yihW b3884 putative DEOR-type transcriptional regulator Putative regulatory proteins putative enzyme; Not classified b3885 3917 3856 1.02 0.007 1926 1800 1.07 0.029 3887 1863 0.022934 0.011217 F5 4 2 2611 2.04 0.311 yihX b3885 putative phosphatase Putative enzymes putative enzyme; Not classified b3886 23743 33941 -1.43 -0.155 39820 41931 -1.05 -0.022 28842 40876 0.170189 0.246094 P19 3 3 4112 -1.45 -0.160 rbn b3886 tRNA processing exoribonuclease BN "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3887 1029 685 1.50 0.177 742 790 -1.06 -0.027 857 766 0.005059 0.004615 B21 3 3 4113 1.10 0.040 yihZ b3887 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3888 13920 13608 1.02 0.010 8478 8182 1.04 0.015 13764 8330 0.081216 0.050153 H5 4 2 2612 1.62 0.209 yiiD b3888 putative acetyltransferase (EC 2.3.1.18) Putative enzymes putative enzyme; Not classified b3889 1348 1150 1.17 0.069 443 363 1.00 0.000 1249 403 0.007369 0.002425 D21 3 3 4114 2.46 0.390 yiiE b3889 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3890 1020 738 1.38 0.141 883 787 1.12 0.050 879 835 0.005188 0.005030 F21 3 3 4115 1.03 0.013 yiiF b3890 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3891 31582 30565 1.03 0.014 14163 12948 1.09 0.039 31074 13556 0.183356 0.081613 D8 4 1 1466 2.25 0.352 fdhE b3891 affects formate dehydrogenase-N Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b3892 8239 8139 1.01 0.005 9096 8720 1.04 0.018 8189 8908 0.048322 0.053629 F8 4 1 1467 -1.11 -0.045 fdoI b3892 "formate dehydrogenase, cytochrome B556 (FDO) subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b3893 32593 31000 1.05 0.022 14233 15105 -1.06 -0.026 31797 14669 0.187623 0.088317 H8 4 1 1468 2.12 0.327 fdoH b3893 "formate dehydrogenase-O, iron-sulfur subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b3894 359 355 1.00 0.000 4504 4743 -1.05 -0.022 357 4624 0.002106 0.027836 J8 4 1 1469 -9.28 -0.967 fdoG b3894 "formate dehydrogenase-O, major subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b3895 2034 1978 1.03 0.012 2690 3159 -1.17 -0.070 2006 2924 0.011835 0.017607 L8 4 1 1470 -1.49 -0.173 fdhD b3895 affects formate dehydrogenase-N Energy metabolism "phenotype; Energy metabolism, carbon: Anaerobic respiration" b3896 1493 724 2.06 0.315 1332 1148 1.16 0.064 1109 1240 0.006541 0.007468 H21 3 3 4116 -1.14 -0.058 yiiG b3896 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3897 195 577 -1.15 -0.062 347 257 1.00 0.000 386 302 0.002279 0.001819 H3 2 1 876 1.00 0.000 frvR b3897 putative frv operon regulatory protein Putative regulatory proteins putative regulator; Not classified b3898 1489 1195 1.25 0.095 1434 1286 1.12 0.047 1342 1360 0.007918 0.008186 J21 3 3 4117 -1.03 -0.014 frvX b3898 frv operon protein Putative transport proteins "orf; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3899 692 720 -1.04 -0.017 206 493 -1.00 0.000 706 349 0.004167 0.002104 J3 2 1 877 1.39 0.143 frvB b3899 "PTS system, fructose-like enzyme IIBC component" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3900 100 196 -1.00 0.000 -162 164 -1.00 0.000 148 1 0.000875 0.000004 L3 2 1 878 1.00 0.000 frvA b3900 "PTS system, fructose-specific IIA component" Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3901 283 -198 1.00 0.000 246 19 1.00 0.000 43 132 0.000251 0.000797 L21 3 3 4118 -1.00 0.000 yiiL b3901 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3902 244 174 1.00 0.000 204 63 1.00 0.000 209 134 0.001234 0.000804 K3 2 1 110 1.00 0.000 rhaD b3902 rhamnulose-phosphate aldolase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3903 250 390 -1.00 0.000 -46 355 -1.00 0.000 320 154 0.001889 0.000928 M3 2 1 111 1.00 0.000 rhaA b3903 L-rhamnose isomerase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3904 112 232 -1.00 0.000 34 2 1.00 0.000 172 18 0.001013 0.000110 O3 2 1 112 1.00 0.000 rhaB b3904 rhamnulokinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3905 887 1667 -1.88 -0.274 1003 1785 -1.78 -0.250 1277 1394 0.007536 0.008394 A5 2 1 113 -1.11 -0.047 rhaS b3905 positive regulator for rhaBAD operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b3906 15 293 -1.00 0.000 57 395 -1.00 0.000 154 226 0.000906 0.001360 C5 2 1 114 -1.00 0.000 rhaR b3906 positive regulator for rhaRS operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b3907 913 875 1.04 0.019 450 758 -1.52 -0.181 894 604 0.005276 0.003635 N3 2 1 879 1.45 0.162 rhaT b3907 rhamnose transport Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3908 6538 6287 1.04 0.017 8481 8566 -1.01 -0.004 6412 8524 0.037836 0.051318 N20 1 1 1231 -1.36 -0.132 sodA b3908 "superoxide dismutase, manganese" Cell processes enzyme; Detoxification b3909 195 519 -1.04 -0.016 -8 209 -1.00 0.000 357 101 0.002106 0.000607 P3 2 1 880 1.00 0.000 kdgT b3909 2-keto-3-deoxy-D-gluconate transport system Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3910 5016 4255 1.18 0.071 5086 4776 1.07 0.027 4636 4931 0.027353 0.029688 N21 3 3 4119 -1.09 -0.036 yiiM b3910 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3911 334 421 -1.00 0.000 297 253 1.00 0.000 378 275 0.002228 0.001658 K17 2 1 166 1.00 0.000 cpxA b3911 "probable sensor protein (histidine protein kinase), acting on arcA" Putative regulatory proteins putative regulator; Global regulatory functions b3912 789 997 -1.26 -0.102 838 801 1.05 0.020 893 820 0.005269 0.004935 I1 4 1 293 1.07 0.028 cpxR b3912 transcriptional regulator in 2-component system Putative regulatory proteins putative regulator; Not classified b3913 7795 8989 -1.15 -0.062 10158 10659 -1.05 -0.021 8392 10408 0.049518 0.062665 P21 3 3 4120 -1.27 -0.102 b3913 b3913 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3914 1052 765 1.37 0.138 977 970 1.01 0.003 908 973 0.005359 0.005861 B23 3 3 4121 -1.09 -0.039 b3914 b3914 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3915 5328 3794 1.40 0.147 3905 3827 1.02 0.009 4561 3866 0.026912 0.023274 D23 3 3 4122 1.16 0.063 yiiP b3915 putative transport system permease protein Putative transport proteins putative transport; Not classified b3916 2250 2584 -1.15 -0.060 1329 1612 -1.21 -0.084 2417 1471 0.014263 0.008854 N8 4 1 1471 1.61 0.207 pfkA b3916 6-phosphofructokinase I Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b3917 300 781 -1.56 -0.194 78 612 -1.22 -0.088 540 345 0.003189 0.002076 B5 2 1 881 1.06 0.026 sbp b3917 periplasmic sulfate-binding protein Transport and binding proteins transport; Transport of small molecules: Anions b3918 307 404 -1.00 0.000 914 920 -1.01 -0.003 355 917 0.002097 0.005521 A18 2 2 2081 -1.84 -0.265 cdh b3918 CDP-diacylglycerol phosphotidylhydrolase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b3919 5612 6196 -1.10 -0.043 1838 2348 -1.28 -0.106 5904 2093 0.034837 0.012599 P8 4 1 1472 2.76 0.442 tpiA b3919 triosephosphate isomerase Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b3920 1285 1326 -1.03 -0.014 1305 1158 1.13 0.052 1305 1231 0.007702 0.007414 F23 3 3 4123 1.04 0.017 yiiQ b3920 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3921 1046 1030 1.02 0.007 708 831 -1.17 -0.070 1038 770 0.006127 0.004635 H23 3 3 4124 1.32 0.121 yiiR b3921 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3922 870 701 1.24 0.094 260 392 -1.00 0.000 786 326 0.004637 0.001962 J23 3 3 4125 1.55 0.189 yiiS b3922 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3923 1428 1584 -1.11 -0.045 389 380 1.00 0.000 1506 384 0.008887 0.002314 K1 4 1 294 2.96 0.472 yiiT b3923 putative regulator Putative regulatory proteins putative regulator; Not classified b3924 4866 4420 1.10 0.042 1515 2144 -1.42 -0.151 4643 1830 0.027395 0.011015 B10 4 1 1473 2.49 0.396 fpr b3924 ferredoxin-NADP reductase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3925 3295 2860 1.15 0.062 3592 3130 1.15 0.060 3078 3361 0.018160 0.020235 L23 3 3 4126 -1.11 -0.047 glpX b3925 unknown function in glycerol metabolism "Hypothetical, unclassified, unknown" phenotype; Not classified b3926 12210 9461 1.29 0.111 6085 6461 -1.06 -0.026 10835 6273 0.063936 0.037765 G12 4 2 2252 1.69 0.229 glpK b3926 glycerol kinase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3927 244 376 -1.00 0.000 110 261 -1.00 0.000 310 185 0.001829 0.001117 D5 2 1 882 1.00 0.000 glpF b3927 facilitated diffusion of glycerol Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3928 13872 11656 1.19 0.076 16016 15501 1.03 0.014 12764 15758 0.075314 0.094874 N23 3 3 4127 -1.26 -0.100 yiiU b3928 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3929 1863 2327 -1.25 -0.097 1429 1209 1.18 0.073 2095 1319 0.012361 0.007943 L15 1 2 2366 1.56 0.192 menG b3929 "menaquinone biosynthesis, unknown" "Biosynthesis of cofactors, prosthetic groups and carriers" "putative enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b3930 1344 1113 1.21 0.082 1284 1171 1.10 0.040 1229 1228 0.007249 0.007391 N15 1 2 2367 -1.02 -0.008 menA b3930 "1,4-dihydroxy-2-naphthoate --> dimethylmenaquinone" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b3931 2241 2042 1.10 0.040 3308 3490 -1.05 -0.023 2142 3399 0.012639 0.020463 P20 1 1 1232 -1.62 -0.209 hslU b3931 "heat shock protein hslVU, ATPase subunit, homologous to chaperones" Cell processes "factor; Adaptations, atypical conditions" b3932 1704 1424 1.20 0.078 2689 2803 -1.04 -0.018 1564 2746 0.009228 0.016531 M23 3 2 1823 -1.79 -0.253 hslV b3932 "heat shock protein hslVU, proteasome-related peptidase subunit" Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b3933 2496 2135 1.17 0.068 3776 3686 1.02 0.010 2316 3731 0.013664 0.022463 B22 1 1 1233 -1.64 -0.216 ftsN b3933 essential cell division protein Cell processes phenotype; Cell division b3934 4003 1774 2.26 0.353 2092 2163 -1.03 -0.015 2888 2128 0.017044 0.012811 M17 2 1 167 1.33 0.124 cytR b3934 "regulator for deo operon, udp, cdd, tsx, nupC, and nupG" Regulatory function regulator; Global regulatory functions b3935 23 74 -1.00 0.000 -27 -82 1.00 0.000 49 -55 0.000287 -0.000331 K15 1 2 1598 1.00 0.000 priA b3935 primosomal protein N'(= factor Y)(putative helicase) "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b3936 3355 2915 1.15 0.061 9201 8960 1.03 0.012 3135 9080 0.018500 0.054669 O23 3 2 1824 -2.96 -0.471 rpmE b3936 50S ribosomal subunit protein L31 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3937 6743 5793 1.16 0.066 5579 5631 -1.01 -0.004 6268 5605 0.036985 0.033746 P23 3 3 4128 1.10 0.040 yiiX b3937 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3938 3072 1994 1.54 0.188 2234 1967 1.14 0.055 2533 2101 0.014947 0.012646 G12 1 2 1964 1.18 0.073 metJ b3938 repressor of all met genes but metF Regulatory function regulator; Amino acid biosynthesis: Methionine b3939 15556 16835 -1.08 -0.034 13401 12177 1.10 0.042 16196 12789 0.095566 0.076995 I12 1 2 1965 1.24 0.094 metB b3939 cystathionine gamma-synthase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Methionine b3940 8558 7038 1.22 0.085 12353 12998 -1.05 -0.022 7798 12675 0.046013 0.076313 K12 1 2 1966 -1.66 -0.220 metL b3940 aspartokinase II and homoserine dehydrogenase II Amino acid biosynthesis enzyme; Amino acid biosynthesis: Methionine b3941 6389 7317 -1.15 -0.059 6953 6819 1.02 0.008 6853 6886 0.040439 0.041458 I12 4 2 2253 -1.03 -0.011 metF b3941 "5,10-methylenetetrahydrofolate reductase" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3942 2813 2174 1.29 0.112 2159 2216 -1.03 -0.011 2494 2188 0.014716 0.013170 D22 1 1 1234 1.12 0.048 katG b3942 catalase; hydroperoxidase HPI(I) Cell processes enzyme; Detoxification b3943 3395 3898 -1.15 -0.060 2328 2699 -1.16 -0.064 3646 2514 0.021516 0.015134 B1 4 3 4129 1.42 0.153 yijE b3943 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3944 1736 1577 1.10 0.042 1310 1311 -1.00 0.000 1656 1310 0.009773 0.007889 D1 4 3 4130 1.24 0.093 yijF b3944 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3945 3397 3228 1.05 0.022 2925 3171 -1.08 -0.035 3313 3048 0.019547 0.018351 K12 4 2 2254 1.07 0.027 gldA b3945 "glycerol dehydrogenase, (NAD)" Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b3946 581 590 -1.01 -0.006 484 1048 -2.10 -0.321 586 766 0.003455 0.004612 D10 4 1 1474 -1.33 -0.125 talC b3946 putative transaldolase Putative enzymes putative enzyme; Not classified b3947 2099 2184 -1.04 -0.017 1544 1510 1.02 0.010 2141 1527 0.012635 0.009192 F5 2 1 883 1.37 0.138 ptsA b3947 PEP-protein phosphotransferase system enzyme I Transport and binding proteins "enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3948 3970 3793 1.05 0.020 4101 4823 -1.18 -0.070 3882 4462 0.022906 0.026865 F1 4 3 4131 -1.17 -0.069 yijI b3948 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3949 113 121 -1.00 0.000 78 113 -1.00 0.000 117 95 0.000689 0.000574 E5 2 1 115 1.00 0.000 frwC b3949 "PTS system, fructose-like enzyme II component" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b3950 758 829 -1.09 -0.039 491 503 -1.01 -0.003 793 497 0.004681 0.002993 G5 2 1 116 1.56 0.193 frwB b3950 PTS system fructose-like IIB component 1 Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3951 4612 4324 1.07 0.028 6166 5915 1.04 0.018 4468 6041 0.026365 0.036368 F10 4 1 1475 -1.38 -0.140 pflD b3951 formate acetyltransferase 2 Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b3952 838 978 -1.17 -0.067 967 861 1.12 0.051 908 914 0.005357 0.005504 H10 4 1 1476 -1.03 -0.012 pflC b3952 probable pyruvate formate lyase activating enzyme 2 Putative enzymes "putative enzyme; Energy metabolism, carbon: Anaerobic respiration" b3953 -54 91 -1.00 0.000 -54 109 -1.00 0.000 18 28 0.000108 0.000166 I5 2 1 117 -1.00 0.000 frwD b3953 PTS system fructose-like IIB component 2 Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b3954 233 241 -1.00 0.000 160 150 1.00 0.000 237 155 0.001399 0.000935 M1 4 1 295 1.00 0.000 yijO b3954 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b3955 3997 4471 -1.12 -0.049 2762 2806 -1.02 -0.007 4234 2784 0.024984 0.016761 H1 4 3 4132 1.49 0.173 yijP b3955 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3956 7565 7066 1.07 0.030 2250 2532 -1.13 -0.051 7316 2391 0.043167 0.014396 J10 4 1 1477 3.00 0.477 ppc b3956 phosphoenolpyruvate carboxylase Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b3957 1853 1839 1.01 0.003 1739 1598 1.09 0.037 1846 1668 0.010895 0.010045 M12 1 2 1967 1.08 0.035 argE b3957 acetylornithine deacetylase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b3958 1439 1152 1.25 0.097 1260 882 1.43 0.155 1296 1071 0.007646 0.006447 O12 1 2 1968 1.19 0.074 argC b3958 N-acetyl-gamma-glutamylphosphate reductase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b3959 2077 1951 1.06 0.027 1943 1460 1.33 0.124 2014 1701 0.011884 0.010243 A14 1 2 1969 1.16 0.065 argB b3959 acetylglutamate kinase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b3960 5765 5226 1.10 0.043 5091 4975 1.02 0.010 5495 5033 0.032426 0.030303 C14 1 2 1970 1.07 0.029 argH b3960 argininosuccinate lyase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b3961 328 359 -1.00 0.000 43 276 -1.00 0.000 343 159 0.002025 0.000959 O17 2 1 168 1.00 0.000 oxyR b3961 "activator, hydrogen peroxide-inducible genes" Regulatory function regulator; Global regulatory functions b3962 3694 4045 -1.09 -0.039 3711 3814 -1.03 -0.012 3870 3763 0.022834 0.022652 J5 4 2 2613 1.01 0.003 udhA b3962 putative oxidoreductase Putative enzymes putative enzyme; Not classified b3963 11810 12064 -1.02 -0.009 7824 7430 1.05 0.022 11937 7627 0.070436 0.045919 J1 4 3 4133 1.53 0.186 yijC b3963 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3964 7548 7175 1.05 0.022 5566 5819 -1.05 -0.019 7361 5692 0.043437 0.034271 L1 4 3 4134 1.27 0.103 yijD b3964 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3965 10116 10179 -1.01 -0.003 7196 7932 -1.10 -0.042 10147 7564 0.059877 0.045539 H6 2 3 1825 1.31 0.119 trmA b3965 tRNA (uracil-5-)-methyltransferase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b3966 1210 1467 -1.21 -0.084 1229 1781 -1.45 -0.161 1339 1505 0.007900 0.009061 H5 2 1 884 -1.15 -0.060 btuB b3966 "outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23" Transport and binding proteins membrane; Outer membrane constituents b3967 1002 935 1.07 0.030 646 798 -1.23 -0.092 968 722 0.005712 0.004348 E22 2 1 563 1.31 0.118 murI b3967 "glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan" Cell structure "enzyme; Murein sacculus, peptidoglycan" b3972 6153 5555 1.11 0.044 4857 5319 -1.10 -0.039 5854 5088 0.034542 0.030632 G22 2 1 564 1.13 0.052 murB b3972 UDP-N-acetylenolpyruvoylglucosamine reductase Cell structure "enzyme; Murein sacculus, peptidoglycan" b3973 1093 1012 1.08 0.034 834 885 -1.06 -0.026 1053 860 0.006212 0.005175 P15 1 2 2368 1.20 0.079 birA b3973 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Biotin" b3974 1746 1350 1.29 0.112 1104 1417 -1.28 -0.108 1548 1260 0.009135 0.007587 B17 1 2 2369 1.20 0.081 coaA b3974 pantothenate kinase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Pantothenate" b3975 2706 3198 -1.18 -0.072 1656 2155 -1.30 -0.114 2952 1905 0.017418 0.011471 N1 4 3 4135 1.52 0.181 b3975 b3975 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3980 33949 40321 -1.19 -0.075 177891 176886 1.01 0.002 37135 177389 0.219123 1.067978 C1 4 2 1826 -4.87 -0.688 tufB b3980 protein chain elongation factor EF-Tu (duplicate of tufA) "Translation, post-translational modification" factor; Proteins - translation and modification b3981 1839 1763 1.04 0.018 2187 4600 -2.10 -0.323 1801 3393 0.010626 0.020429 J5 2 1 885 -1.92 -0.284 secE b3981 preprotein translocase Transport and binding proteins "transport; Protein, peptide secretion" b3982 4207 4547 -1.08 -0.034 9258 8922 1.04 0.016 4377 9090 0.025829 0.054726 G7 2 2 1660 -2.12 -0.326 nusG b3982 component in transcription antitermination "Transcription, RNA processing and degradation" "putative factor; RNA synthesis, modification, DNA transcription" b3983 15987 17016 -1.06 -0.027 53041 52518 1.01 0.004 16502 52780 0.097372 0.317763 E1 4 2 1827 -3.26 -0.514 rplK b3983 50S ribosomal subunit protein L11 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3984 5858 7120 -1.22 -0.085 20396 22631 -1.11 -0.045 6489 21513 0.038291 0.129522 G1 4 2 1828 -3.38 -0.529 rplA b3984 "50S ribosomal subunit protein L1, regulates synthesis of L1 and L11" "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3985 14942 16292 -1.09 -0.038 72904 72404 1.01 0.003 15617 72654 0.092151 0.437416 I1 4 2 1829 -4.75 -0.676 rplJ b3985 50S ribosomal subunit protein L10 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3986 33841 29609 1.14 0.058 84966 91196 -1.07 -0.031 31725 88081 0.187198 0.530296 K1 4 2 1830 -2.83 -0.452 rplL b3986 50S ribosomal subunit protein L7/L12 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b3987 9561 9536 1.00 0.001 20614 22905 -1.11 -0.046 9549 21759 0.056343 0.131004 I7 2 2 1661 -2.33 -0.366 rpoB b3987 "RNA polymerase, beta subunit" "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b3988 167 633 -1.27 -0.102 408 924 -1.85 -0.267 400 666 0.002359 0.004010 K7 2 2 1662 -1.34 -0.126 rpoC b3988 "RNA polymerase, beta prime subunit" "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b3989 517 365 1.03 0.015 336 364 -1.00 0.000 441 350 0.002601 0.002107 F22 1 1 1235 1.00 0.000 htrC b3989 heat shock protein htrC Cell processes "factor; Adaptations, atypical conditions" b3990 2058 1874 1.10 0.041 5728 5718 1.00 0.001 1966 5723 0.011602 0.034457 D17 1 2 2370 -2.97 -0.473 thiH b3990 "thiamin biosynthesis, thiazole moiety" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b3991 3086 2953 1.05 0.019 1466 1299 1.13 0.052 3020 1382 0.017817 0.008321 F17 1 2 2371 2.14 0.331 thiG b3991 "thiamin biosynthesis, thiazole moiety" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b3992 415 521 -1.04 -0.018 312 239 1.00 0.000 468 275 0.002761 0.001657 H17 1 2 2372 1.00 0.000 thiF b3992 "thiamin biosynthesis, thiazole moiety" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b3993 2638 2663 -1.01 -0.004 1147 1107 1.04 0.015 2650 1127 0.015639 0.006783 J17 1 2 2373 2.31 0.363 thiE b3993 "thiamin biosynthesis, thiazole moiety" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b3994 244 226 1.00 0.000 161 243 -1.00 0.000 235 202 0.001387 0.001218 L17 1 2 2374 1.00 0.000 thiC b3994 "thiamin biosynthesis, pyrimidine moiety" "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Thiamin" b3995 1100 1360 -1.24 -0.092 1907 1502 1.27 0.104 1230 1704 0.007257 0.010260 O1 4 1 296 -1.41 -0.150 yjaE b3995 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b3996 3783 4411 -1.17 -0.067 3232 3108 1.04 0.017 4097 3170 0.024174 0.019084 H12 2 3 4136 1.27 0.103 yjaD b3996 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b3997 1155 1065 1.08 0.035 1037 953 1.09 0.037 1110 995 0.006550 0.005991 N17 1 2 2375 1.09 0.039 hemE b3997 uroporphyrinogen decarboxylase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" b3998 2583 2752 -1.07 -0.028 1998 2091 -1.05 -0.020 2668 2044 0.015741 0.012309 B3 4 3 4137 1.28 0.107 nfi b3998 endonuclease V (deoxyinosine 3'endoduclease) "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b3999 1035 1273 -1.23 -0.090 1061 1056 1.00 0.002 1154 1058 0.006810 0.006372 D3 4 3 4138 1.07 0.029 yjaG b3999 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4000 8579 8859 -1.03 -0.014 11966 11985 -1.00 -0.001 8719 11976 0.051446 0.072099 M15 1 2 1599 -1.40 -0.147 hupA b4000 DNA-binding protein HU-alpha (HU-2) "DNA replication, repair, restriction/modification" "factor; Basic proteins - synthesis, modification" b4001 794 734 1.08 0.034 681 830 -1.22 -0.086 764 756 0.004506 0.004550 F3 4 3 4139 -1.01 -0.004 yjaH b4001 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4002 14186 14006 1.01 0.006 15356 15089 1.02 0.008 14096 15223 0.083177 0.091649 H3 4 3 4140 -1.10 -0.042 yjaI b4002 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4003 5866 5232 1.12 0.050 2527 2697 -1.07 -0.028 5549 2612 0.032741 0.015726 L10 4 1 1478 2.08 0.318 hydH b4003 "sensor kinase for HydG, hydrogenase 3 activity" Energy metabolism "enzyme; Energy metabolism, carbon: Fermentation" b4004 267 385 -1.00 0.000 327 397 -1.00 0.000 326 362 0.001923 0.002178 N10 4 1 1479 -1.00 0.000 hydG b4004 response regulator of hydrogenase 3 activity (sensor HydH) Regulatory function "regulator; Energy metabolism, carbon: Fermentation" b4005 1225 1020 1.20 0.080 750 753 -1.00 -0.002 1123 751 0.006624 0.004524 G4 2 2 2028 1.46 0.166 purD b4005 phosphoribosylglycinamide synthetase = GAR synthetase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b4006 1009 1656 -1.64 -0.215 1666 1753 -1.05 -0.022 1332 1710 0.007861 0.010295 I4 2 2 2029 -1.31 -0.117 purH b4006 phosphoribosylaminoimidazolecarboxamide formyltransferase = AICAR formyltransferase; IMP cyclohydrolase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b4011 3882 3396 1.14 0.058 4795 4753 1.01 0.004 3639 4774 0.021471 0.028744 J3 4 3 4141 -1.34 -0.127 yjaA b4011 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4012 3619 3489 1.04 0.016 3000 3186 -1.06 -0.026 3554 3093 0.020972 0.018623 L3 4 3 4142 1.13 0.052 yjaB b4012 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4013 5798 6437 -1.11 -0.045 7531 5793 1.30 0.114 6118 6662 0.036099 0.040110 E14 1 2 1971 -1.11 -0.046 metA b4013 homoserine transsuccinylase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Methionine b4014 14418 12991 1.11 0.045 1819 1796 1.01 0.006 13705 1807 0.080867 0.010882 M12 4 2 2255 7.43 0.871 aceB b4014 malate synthase A Central intermediary metabolism enzyme; Central intermediary metabolism: Glyoxylate bypass b4015 7184 6080 1.18 0.072 690 843 -1.22 -0.087 6632 767 0.039133 0.004615 O12 4 2 2256 8.48 0.928 aceA b4015 isocitrate lyase Central intermediary metabolism enzyme; Central intermediary metabolism: Glyoxylate bypass b4016 4510 4278 1.05 0.023 3626 3945 -1.09 -0.037 4394 3786 0.025929 0.022793 A14 4 2 2257 1.14 0.056 aceK b4016 isocitrate dehydrogenase kinase/phosphatase Central intermediary metabolism enzyme; Central intermediary metabolism: Glyoxylate bypass b4017 4337 4312 1.01 0.002 6544 7135 -1.09 -0.038 4325 6839 0.025518 0.041177 C18 2 2 2082 -1.61 -0.208 arp b4017 regulator of acetyl CoA synthetase Regulatory function regulator; Fatty acid and phosphatidic acid biosynthesis b4018 9656 9962 -1.03 -0.014 6375 6497 -1.02 -0.008 9809 6436 0.057879 0.038751 C14 4 2 2258 1.49 0.174 iclR b4018 repressor of aceBA operon Regulatory function regulator; Central intermediary metabolism: Glyoxylate bypass b4019 516 391 1.03 0.014 132 45 1.00 0.000 454 88 0.002678 0.000531 G14 1 2 1972 1.00 0.000 metH b4019 "B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Methionine b4020 29060 28083 1.03 0.015 29453 31888 -1.08 -0.034 28571 30671 0.168590 0.184654 A14 3 1 625 -1.10 -0.040 yjbB b4020 putative alpha helix protein "Hypothetical, unclassified, unknown" phenotype; Not classified b4021 1125 1132 -1.01 -0.003 1962 2022 -1.03 -0.013 1129 1992 0.006662 0.011993 M1 4 2 1831 -1.80 -0.255 pepE b4021 "peptidase E, a dipeptidase where amino-terminal residue is aspartate" Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b4022 26533 23195 1.14 0.058 24258 22224 1.09 0.038 24864 23241 0.146713 0.139925 N3 4 3 4143 1.05 0.021 yjbC b4022 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4023 1622 1311 1.24 0.092 742 833 -1.12 -0.051 1466 787 0.008651 0.004741 P3 4 3 4144 1.82 0.261 yjbD b4023 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4024 1791 1638 1.09 0.039 1349 1338 1.01 0.004 1715 1344 0.010117 0.008090 I14 1 2 1973 1.25 0.097 lysC b4024 "aspartokinase III, lysine sensitive" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Lysine b4025 1266 1374 -1.09 -0.036 833 846 -1.02 -0.007 1320 839 0.007788 0.005053 P10 4 1 1480 1.54 0.188 pgi b4025 glucosephosphate isomerase Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b4026 1368 1575 -1.15 -0.061 1568 1727 -1.10 -0.042 1471 1647 0.008682 0.009917 B5 4 3 4145 -1.14 -0.058 yjbE b4026 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4027 698 643 1.09 0.036 686 568 1.21 0.082 671 627 0.003958 0.003775 D5 4 3 4146 1.05 0.021 yjbF b4027 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4028 1241 1306 -1.05 -0.022 677 1087 -1.60 -0.205 1274 882 0.007515 0.005309 F5 4 3 4147 1.42 0.151 yjbG b4028 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4029 1405 2053 -1.46 -0.165 3004 3263 -1.09 -0.036 1729 3134 0.010204 0.018865 H5 4 3 4148 -1.85 -0.267 yjbH b4029 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4030 2643 2261 1.17 0.068 1560 1555 1.00 0.001 2452 1558 0.014468 0.009378 J5 4 3 4149 1.54 0.188 yjbA b4030 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4031 1766 1738 1.02 0.007 1409 1018 1.38 0.141 1752 1214 0.010337 0.007307 L5 2 1 886 1.41 0.151 xylE b4031 xylose-proton symport Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4032 2139 2261 -1.06 -0.024 1133 1263 -1.11 -0.047 2200 1198 0.012981 0.007212 N5 2 1 887 1.80 0.255 malG b4032 "part of maltose permease, inner membrane" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4033 1377 1740 -1.26 -0.102 1039 1213 -1.17 -0.067 1558 1126 0.009194 0.006781 P5 2 1 888 1.36 0.132 malF b4033 "part of maltose permease, periplasmic" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4034 894 1104 -1.23 -0.092 662 1250 -1.89 -0.276 999 956 0.005895 0.005756 B7 2 1 889 1.02 0.010 malE b4034 periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4035 2767 2510 1.10 0.042 1950 1906 1.02 0.010 2638 1928 0.015568 0.011606 D7 2 1 890 1.34 0.128 malK b4035 ATP-binding component of transport system for maltose Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4036 -124 595 -1.19 -0.075 179 770 -1.54 -0.188 235 475 0.001387 0.002857 F7 2 1 891 -1.00 0.000 lamB b4036 phage lambda receptor protein; maltose high-affinity receptor Transport and binding proteins "IS, phage, Tn; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4037 2410 2607 -1.08 -0.034 1271 1317 -1.04 -0.015 2509 1294 0.014804 0.007791 K5 2 1 118 1.90 0.279 malM b4037 periplasmic protein of mal regulon Carbon compound catabolism phenotype; Degradation of small molecules: Carbon compounds b4038 442 394 1.00 0.000 254 364 -1.00 0.000 418 309 0.002465 0.001861 L5 4 3 4150 1.00 0.000 yjbI b4038 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4039 829 938 -1.13 -0.054 647 672 -1.04 -0.017 884 659 0.005214 0.003969 P17 1 2 2376 1.31 0.118 ubiC b4039 chorismate lyase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b4040 3277 4194 -1.28 -0.107 5301 5060 1.05 0.020 3736 5181 0.022043 0.031190 B19 1 2 2377 -1.41 -0.151 ubiA b4040 4-hydroxybenzoate-octaprenyltransferase "Biosynthesis of cofactors, prosthetic groups and carriers" "enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" b4041 7260 8030 -1.11 -0.044 5811 6788 -1.17 -0.068 7645 6300 0.045112 0.037927 E18 2 2 2083 1.19 0.075 plsB b4041 glycerol-3-phosphate acyltransferase Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b4042 601 727 -1.21 -0.083 924 781 1.18 0.073 664 852 0.003918 0.005132 G18 2 2 2084 -1.31 -0.117 dgkA b4042 diacylglycerol kinase Fatty acid and phospholipid metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b4043 2683 2980 -1.11 -0.046 2443 2571 -1.05 -0.022 2831 2507 0.016705 0.015093 A19 2 1 169 1.11 0.044 lexA b4043 regulator for SOS(lexA) regulon Regulatory function regulator; Global regulatory functions b4044 2909 2940 -1.01 -0.005 2222 2634 -1.19 -0.074 2925 2428 0.017258 0.014620 N5 4 3 4151 1.18 0.072 dinF b4044 DNA-damage-inducible protein F "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b4045 993 893 1.11 0.046 515 515 1.00 0.001 943 515 0.005563 0.003100 P5 4 3 4152 1.79 0.254 yjbJ b4045 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4046 1450 1760 -1.21 -0.084 1669 1827 -1.09 -0.039 1605 1748 0.009471 0.010525 F21 3 1 1043 -1.11 -0.046 yjbK b4046 putative regulator Putative regulatory proteins putative regulator; Not classified b4047 107 87 1.00 0.000 7 66 -1.00 0.000 97 36 0.000573 0.000219 B7 4 3 4153 1.00 0.000 yjbL b4047 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4048 1435 1446 -1.01 -0.003 798 803 -1.01 -0.003 1441 800 0.008501 0.004818 D7 4 3 4154 1.76 0.247 yjbM b4048 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4049 12621 11528 1.09 0.039 7540 7200 1.05 0.020 12074 7370 0.071245 0.044371 F7 4 3 4155 1.61 0.206 yjbN b4049 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4050 571 473 1.14 0.058 851 671 1.27 0.104 522 761 0.003080 0.004582 H7 4 3 4156 -1.49 -0.172 yjbO b4050 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4051 5578 5680 -1.02 -0.008 1708 1806 -1.06 -0.024 5629 1757 0.033217 0.010579 B12 4 1 1481 3.14 0.497 qor b4051 quinone oxidoreductase Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b4052 3283 3410 -1.04 -0.016 2721 2605 1.04 0.019 3346 2663 0.019746 0.016034 O15 1 2 1600 1.23 0.090 dnaB b4052 replicative DNA helicase; part of primosome "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b4053 1395 1350 1.03 0.014 1710 1616 1.06 0.025 1372 1663 0.008099 0.010013 K14 1 2 1974 -1.24 -0.092 alr b4053 alanine racemase 1 Amino acid biosynthesis enzyme; Amino acid biosynthesis: Alanine b4054 3543 2592 1.37 0.136 4314 3691 1.17 0.068 3067 4002 0.018100 0.024097 M14 1 2 1975 -1.33 -0.124 tyrB b4054 "tyrosine aminotransferase, tyrosine repressible" Amino acid biosynthesis enzyme; Amino acid biosynthesis: Tyrosine b4055 1393 1411 -1.01 -0.006 969 1304 -1.35 -0.129 1402 1137 0.008272 0.006843 J7 4 3 4157 1.21 0.082 aphA b4055 diadenosine tetraphosphatase Central intermediary metabolism enzyme; Central intermediary metabolism: Nucleotide hydrolysis b4056 11104 14353 -1.29 -0.111 15141 15452 -1.02 -0.009 12728 15296 0.075106 0.092092 L7 4 3 4158 -1.23 -0.089 yjbQ b4056 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4057 3944 3772 1.05 0.019 3840 3919 -1.02 -0.009 3858 3879 0.022764 0.023357 N7 4 3 4159 -1.03 -0.011 yjbR b4057 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4058 1952 1628 1.20 0.079 1113 937 1.19 0.075 1790 1025 0.010563 0.006168 A17 1 2 1601 1.71 0.234 uvrA b4058 excision nuclease subunit A "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b4059 2146 2121 1.01 0.005 1936 2179 -1.13 -0.051 2133 2057 0.012589 0.012386 C17 1 2 1602 1.02 0.007 ssb b4059 ssDNA-binding protein "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b4060 1330 1209 1.10 0.041 932 918 1.01 0.006 1269 925 0.007491 0.005569 P7 4 3 4160 1.35 0.129 yjcB b4060 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4061 1297 1342 -1.03 -0.015 756 1151 -1.52 -0.183 1319 954 0.007785 0.005743 B9 4 3 4161 1.36 0.132 yjcC b4061 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4062 199 392 -1.00 0.000 244 443 -1.00 0.000 296 343 0.001745 0.002067 C19 2 1 170 -1.00 0.000 soxS b4062 regulation of superoxide response regulon Regulatory function regulator; Global regulatory functions b4063 324 440 -1.00 0.000 121 139 -1.00 0.000 382 130 0.002253 0.000783 E19 2 1 171 1.00 0.000 soxR b4063 redox-sensing activator of soxS Regulatory function regulator; Global regulatory functions b4064 4356 4045 1.08 0.032 5310 5695 -1.07 -0.030 4200 5503 0.024785 0.033129 D9 4 3 4162 -1.34 -0.126 yjcD b4064 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4065 604 605 -1.00 -0.001 332 412 -1.00 0.000 605 372 0.003568 0.002241 F9 4 3 4163 1.19 0.075 yjcE b4065 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4066 136 156 -1.00 0.000 1 94 -1.00 0.000 146 47 0.000863 0.000283 H9 4 3 4164 1.00 0.000 yjcF b4066 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4067 2786 3033 -1.09 -0.037 3226 3873 -1.20 -0.079 2910 3550 0.017169 0.021370 J9 4 3 4165 -1.24 -0.095 yjcG b4067 putative transport protein Putative transport proteins putative transport; Not classified b4068 1264 1919 -1.52 -0.181 992 1168 -1.18 -0.071 1592 1080 0.009393 0.006503 L9 4 3 4166 1.44 0.160 yjcH b4068 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4069 858 864 -1.01 -0.003 577 591 -1.03 -0.011 861 584 0.005081 0.003516 I18 2 2 2085 1.45 0.160 acs b4069 acetyl-CoA synthetase Energy metabolism enzyme; Fatty acid and phosphatidic acid biosynthesis b4070 31534 31219 1.01 0.004 7478 7376 1.01 0.006 31377 7427 0.185146 0.044714 D12 4 1 1482 4.14 0.617 nrfA b4070 periplasmic cytochrome c(552): plays a role in nitrite reduction Energy metabolism "carrier; Energy metabolism, carbon: Electron transport" b4071 4393 4560 -1.04 -0.016 974 1228 -1.26 -0.101 4477 1101 0.026415 0.006631 F12 4 1 1483 3.98 0.600 nrfB b4071 formate-dependent nitrite reductase; a penta-haeme cytochrome c Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4072 3244 3249 -1.00 -0.001 416 533 -1.07 -0.027 3246 474 0.019156 0.002855 H12 4 1 1484 6.39 0.805 nrfC b4072 formate-dependent nitrite reductase; Fe-S centers Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4073 5615 5400 1.04 0.017 4449 4635 -1.04 -0.018 5508 4542 0.032498 0.027346 J12 4 1 1485 1.19 0.075 nrfD b4073 formate-dependent nitrate reductase complex; transmembrane protein Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4074 77137 72412 1.07 0.027 56188 57869 -1.03 -0.013 74774 57029 0.441222 0.343345 L12 4 1 1486 1.29 0.109 nrfE b4074 formate-dependent nitrite reductase; possible assembly function Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4075 6470 6633 -1.03 -0.011 5256 5691 -1.08 -0.035 6552 5474 0.038660 0.032955 N12 4 1 1487 1.17 0.069 nrfF b4075 part of formate-dependent nitrite reductase complex Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4076 2172 2283 -1.05 -0.022 1273 1361 -1.07 -0.029 2228 1317 0.013146 0.007930 P12 4 1 1488 1.66 0.220 nrfG b4076 part of formate-dependent nitrite reductase complex Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4077 331 367 -1.00 0.000 491 796 -1.59 -0.202 349 643 0.002059 0.003872 H7 2 1 892 -1.29 -0.111 gltP b4077 glutamate-aspartate symport protein Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b4078 923 942 -1.02 -0.009 765 840 -1.10 -0.041 933 802 0.005502 0.004829 N9 4 3 4167 1.14 0.057 yjcO b4078 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4079 12518 11492 1.09 0.037 6421 6006 1.07 0.029 12005 6213 0.070837 0.037408 B14 4 1 1489 1.89 0.277 fdhF b4079 selenopolypeptide subunit of formate dehydrogenase H Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4080 3853 4163 -1.08 -0.034 2949 3030 -1.03 -0.012 4008 2989 0.023649 0.017998 L5 4 2 2614 1.31 0.119 yjcP b4080 putative enzyme "Hypothetical, unclassified, unknown" orf; Not classified b4081 2109 2088 1.01 0.004 2395 2181 1.10 0.040 2099 2288 0.012384 0.013775 N5 4 2 2615 -1.11 -0.046 yjcQ b4081 putative enzyme "Hypothetical, unclassified, unknown" orf; Not classified b4082 500 584 -1.17 -0.068 395 517 -1.03 -0.014 542 456 0.003199 0.002744 H22 1 1 1236 1.07 0.028 yjcR b4082 putative membrane protein putative membrane protein putative membrane; Not classified b4083 517 446 1.03 0.015 315 267 1.00 0.000 482 291 0.002843 0.001753 P9 4 3 4168 1.00 0.000 yjcS b4083 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4084 493 520 -1.04 -0.017 424 388 1.00 0.000 506 406 0.002988 0.002444 J22 1 1 1237 1.00 0.000 yjcT b4084 putative NAGC-like transcriptional regulator Putative regulatory proteins putative regulator; Not classified b4085 122727 100148 1.23 0.088 39949 41836 -1.05 -0.020 111438 40892 0.657562 0.246196 D14 4 1 1490 2.67 0.427 yjcU b4085 putative epimerase Putative enzymes putative enzyme; Not classified b4086 714 534 1.34 0.126 246 363 -1.00 0.000 624 305 0.003683 0.001834 H21 3 1 1044 1.23 0.089 yjcV b4086 putative transport system permease protein Putative transport proteins putative transport; Not classified b4087 611 710 -1.16 -0.065 324 108 1.00 0.000 660 216 0.003895 0.001302 J21 3 1 1045 1.30 0.113 yjcW b4087 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b4088 346 350 -1.00 0.000 186 233 -1.00 0.000 348 210 0.002053 0.001262 L21 3 1 1046 1.00 0.000 yjcX b4088 putative LACI-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b4089 5297 5638 -1.06 -0.027 5277 5375 -1.02 -0.008 5468 5326 0.032262 0.032064 F14 4 1 1491 1.01 0.003 rpiR b4089 transcriptional repressor of rpiB expression Regulatory function "regulator; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b4090 2753 2447 1.12 0.051 738 603 1.22 0.088 2600 670 0.015343 0.004036 M5 2 1 119 3.80 0.580 rpiB b4090 ribose 5-phosphate isomerase B Central intermediary metabolism "enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" b4091 47 116 -1.00 0.000 71 247 -1.00 0.000 81 159 0.000478 0.000956 B11 4 3 4169 -1.00 0.000 phnQ b4091 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4092 6068 6017 1.01 0.004 2653 2768 -1.04 -0.018 6043 2710 0.035656 0.016318 E14 4 2 2259 2.19 0.339 phnP b4092 phosphonate metabolism Central intermediary metabolism phenotype; Central intermediary metabolism: Phosphorus compounds b4093 5465 6210 -1.14 -0.055 3003 3213 -1.07 -0.029 5838 3108 0.034447 0.018711 G14 4 2 2260 1.84 0.265 phnO b4093 "putative regulator, phn operon" Putative regulatory proteins putative regulator; Not classified b4094 7156 7520 -1.05 -0.022 4609 4703 -1.02 -0.009 7338 4656 0.043299 0.028032 I14 4 2 2261 1.54 0.189 phnN b4094 ATP-binding component of phosphonate transport Transport and binding proteins transport; Central intermediary metabolism: Phosphorus compounds b4095 3495 2957 1.18 0.073 2167 2271 -1.05 -0.020 3226 2219 0.019034 0.013357 K14 4 2 2262 1.42 0.154 phnM b4095 phosphonate metabolism Central intermediary metabolism phenotype; Central intermediary metabolism: Phosphorus compounds b4096 2332 2280 1.02 0.010 1057 1314 -1.24 -0.095 2306 1185 0.013608 0.007136 M14 4 2 2263 1.91 0.280 phnL b4096 ATP-binding component of phosphonate transport Transport and binding proteins transport; Central intermediary metabolism: Phosphorus compounds b4097 662 827 -1.25 -0.097 381 543 -1.09 -0.036 745 462 0.004393 0.002782 O14 4 2 2264 1.46 0.166 phnK b4097 ATP-binding component of phosphonate transport Transport and binding proteins transport; Central intermediary metabolism: Phosphorus compounds b4098 1660 1848 -1.11 -0.046 360 346 1.00 0.000 1754 353 0.010349 0.002124 A16 4 2 2265 3.45 0.538 phnJ b4098 phosphonate metabolism Central intermediary metabolism putative enzyme; Central intermediary metabolism: Phosphorus compounds b4099 16441 13386 1.23 0.089 11160 12874 -1.15 -0.062 14913 12017 0.087999 0.072349 C16 4 2 2266 1.22 0.085 phnI b4099 phosphonate metabolism Central intermediary metabolism phenotype; Central intermediary metabolism: Phosphorus compounds b4100 5311 5375 -1.01 -0.005 2084 2223 -1.07 -0.028 5343 2153 0.031528 0.012965 E16 4 2 2267 2.43 0.386 phnH b4100 phosphonate metabolism Central intermediary metabolism phenotype; Central intermediary metabolism: Phosphorus compounds b4101 8147 6886 1.18 0.073 3830 3978 -1.04 -0.016 7516 3904 0.044352 0.023505 G16 4 2 2268 1.89 0.276 phnG b4101 phosphonate metabolism Central intermediary metabolism phenotype; Central intermediary metabolism: Phosphorus compounds b4102 3473 2459 1.41 0.150 1694 1412 1.20 0.079 2966 1553 0.017503 0.009350 I16 4 2 2269 1.87 0.272 phnF b4102 putative transcriptional regulator Putative regulatory proteins putative regulator; Not classified b4103 -52 113 -1.00 0.000 96 73 1.00 0.000 31 85 0.000181 0.000509 D11 4 3 4170 -1.00 0.000 b4103 b4103 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4104 1000 1050 -1.05 -0.021 366 535 -1.07 -0.029 1025 450 0.006048 0.002711 J7 2 1 893 2.02 0.304 phnE b4104 membrane channel protein component of Pn transporter Transport and binding proteins transport; Transport of small molecules: Anions b4105 6265 6430 -1.03 -0.011 2101 1987 1.06 0.024 6348 2044 0.037455 0.012306 L7 2 1 894 3.04 0.483 phnD b4105 periplasmic binding protein component of Pn transporter Transport and binding proteins transport; Transport of small molecules: Anions b4106 5003 5370 -1.07 -0.031 2541 2468 1.03 0.013 5187 2504 0.030604 0.015077 N7 2 1 895 2.03 0.307 phnC b4106 ATP-binding component of phosphonate transport Transport and binding proteins transport; Central intermediary metabolism: Phosphorus compounds b4107 1531 1518 1.01 0.004 329 469 -1.00 0.000 1525 399 0.008997 0.002403 F11 4 3 4171 3.00 0.477 phnB b4107 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4108 515 476 1.03 0.013 975 1225 -1.26 -0.099 496 1100 0.002925 0.006625 H11 4 3 4172 -2.21 -0.344 phnA b4108 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4109 697 531 1.31 0.118 500 238 1.00 0.000 614 369 0.003624 0.002222 C14 3 1 626 1.21 0.082 yjdA b4109 putative vimentin Putative enzymes phenotype; Not classified b4110 89 270 -1.00 0.000 131 217 -1.00 0.000 179 174 0.001057 0.001045 J11 4 3 4173 1.00 0.000 yjcZ b4110 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4111 2492 2501 -1.00 -0.001 1111 1140 -1.03 -0.011 2496 1126 0.014731 0.006778 P7 2 1 896 2.17 0.337 proP b4111 low-affinity transport system; proline permease II Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b4112 1274 1429 -1.12 -0.050 1069 1193 -1.12 -0.048 1352 1131 0.007975 0.006808 M7 2 2 1663 1.17 0.069 basS b4112 sensor protein for basR "Transcription, RNA processing and degradation" "enzyme; RNA synthesis, modification, DNA transcription" b4113 10634 9592 1.11 0.045 10601 9939 1.07 0.028 10113 10270 0.059674 0.061832 O7 2 2 1664 -1.04 -0.015 basR b4113 "transcriptional regulatory protein, member of 2-component regulatory system," Regulatory function "regulator; RNA synthesis, modification, DNA transcription" b4114 790 845 -1.07 -0.029 524 637 -1.22 -0.085 818 580 0.004825 0.003494 L11 4 3 4174 1.38 0.140 yjdB b4114 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4115 1163 1437 -1.24 -0.092 1182 1197 -1.01 -0.006 1300 1190 0.007670 0.007163 N21 3 1 1047 1.07 0.030 yjdE b4115 "putative amino acid/amine transport protein, cryptic" Putative transport proteins putative transport; Not classified b4116 1532 1620 -1.06 -0.024 874 760 1.15 0.061 1576 817 0.009299 0.004918 A3 4 1 297 1.89 0.277 adiY b4116 putative ARAC-type regulatory protein Putative regulatory proteins putative regulator; Not classified b4117 4302 4572 -1.06 -0.027 4342 4166 1.04 0.018 4437 4254 0.026182 0.025612 O14 1 2 1976 1.02 0.010 adiA b4117 biodegradative arginine decarboxylase Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b4118 173 378 -1.00 0.000 -232 198 -1.00 0.000 276 -17 0.001627 -0.000102 O5 2 1 120 1.00 0.000 melR b4118 regulator of melibiose operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b4119 4833 4787 1.01 0.004 5819 6150 -1.06 -0.024 4810 5985 0.028384 0.036031 A7 2 1 121 -1.27 -0.104 melA b4119 alpha-galactosidase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b4120 2524 2921 -1.16 -0.063 1739 2130 -1.23 -0.088 2722 1934 0.016064 0.011646 B9 2 1 897 1.38 0.140 melB b4120 melibiose permease II Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4121 214 308 -1.00 0.000 223 236 -1.00 0.000 261 229 0.001540 0.001380 N11 4 3 4175 1.00 0.000 yjdF b4121 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4122 21763 19303 1.13 0.052 12148 12391 -1.02 -0.009 20533 12270 0.121160 0.073870 H14 4 1 1492 1.64 0.215 fumB b4122 fumarase B= fumarate hydratase Class I; anaerobic isozyme Central intermediary metabolism "enzyme; Energy metabolism, carbon: TCA cycle" b4123 1034 1267 -1.23 -0.088 1050 1016 1.03 0.014 1151 1033 0.006789 0.006218 D9 2 1 898 1.09 0.038 dcuB b4123 anaerobic dicarboxylate transport Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4124 498 543 -1.09 -0.036 290 187 1.00 0.000 520 238 0.003070 0.001433 C3 4 1 298 1.02 0.010 yjdG b4124 putative 2-component transcriptional regulator Putative regulatory proteins putative regulator; Not classified b4125 88382 89310 -1.01 -0.005 26499 31314 -1.18 -0.073 88846 28907 0.524254 0.174033 E3 4 1 299 3.01 0.479 yjdH b4125 putative 2-component sensor protein Putative regulatory proteins putative regulator; Not classified b4126 1134 1388 -1.22 -0.088 459 836 -1.67 -0.223 1261 647 0.007441 0.003898 P11 4 3 4176 1.91 0.281 yjdI b4126 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4127 350 393 -1.00 0.000 38 202 -1.00 0.000 371 120 0.002191 0.000722 B13 4 3 4177 1.00 0.000 yjdJ b4127 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4128 78 57 1.00 0.000 22 53 -1.00 0.000 68 37 0.000400 0.000224 D13 4 3 4178 1.00 0.000 yjdK b4128 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4129 1193 1270 -1.07 -0.027 2928 2862 1.02 0.010 1232 2895 0.007267 0.017427 O1 4 2 1832 -2.40 -0.380 lysU b4129 "lysine tRNA synthetase, inducible; heat shock protein" "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b4130 4817 5668 -1.18 -0.071 5554 5175 1.07 0.031 5243 5364 0.030935 0.032297 P21 3 1 1048 -1.04 -0.019 yjdL b4130 putative peptide transporter Putative transport proteins putative transport; Not classified b4131 2108 2359 -1.12 -0.049 1174 1044 1.12 0.051 2233 1109 0.013178 0.006674 A16 1 2 1977 1.97 0.295 cadA b4131 lysine decarboxylase 1 Carbon compound catabolism enzyme; Degradation of small molecules: Amino acids b4132 846 710 1.19 0.076 803 573 1.40 0.146 778 688 0.004590 0.004143 F9 2 1 899 1.11 0.045 cadB b4132 transport of lysine/cadaverine Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b4133 3086 2754 1.12 0.049 2338 2050 1.14 0.057 2920 2194 0.017228 0.013209 C16 1 2 1978 1.30 0.115 cadC b4133 transcriptional activator of cad operon Regulatory function regulator; Degradation of small molecules: Amino acids b4135 1852 1817 1.02 0.008 1482 1712 -1.16 -0.063 1834 1597 0.010825 0.009617 F13 4 3 4179 1.13 0.051 yjdC b4135 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4136 2154 2360 -1.10 -0.040 1700 1733 -1.02 -0.008 2257 1717 0.013320 0.010337 K16 4 2 2270 1.29 0.110 dsbD b4136 thiol:disulfide interchange protein; copper tolerance Putative enzymes putative enzyme; Central intermediary metabolism: Sulfur metabolism b4137 543 558 -1.03 -0.012 1018 1081 -1.06 -0.026 551 1049 0.003249 0.006317 L22 1 1 1238 -1.94 -0.289 cutA b4137 divalent cation tolerance protein; cytochrome c biogenesis Cell processes "phenotype; Adaptations, atypical conditions" b4138 944 962 -1.02 -0.008 775 796 -1.03 -0.011 953 785 0.005623 0.004728 H9 2 1 900 1.19 0.075 dcuA b4138 anaerobic dicarboxylate transport Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4139 3220 3082 1.04 0.019 2302 1845 1.25 0.096 3151 2074 0.018592 0.012484 M16 4 2 2271 1.49 0.173 aspA b4139 aspartate ammonia-lyase (aspartase) Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b4140 1196 1339 -1.12 -0.049 410 462 -1.00 0.000 1268 436 0.007480 0.002625 H13 4 3 4180 2.49 0.397 b4140 b4140 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4141 3779 3306 1.14 0.058 4809 4528 1.06 0.026 3543 4669 0.020904 0.028107 B23 3 1 1049 -1.34 -0.129 yjeH b4141 putative transport Putative transport proteins putative transport; Not classified b4142 3442 4178 -1.21 -0.084 7000 6603 1.06 0.025 3810 6801 0.022480 0.040948 N22 1 1 1239 -1.82 -0.260 mopB b4142 "GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity" Cell processes factor; Chaperones b4143 12669 13690 -1.08 -0.034 18879 18858 1.00 0.000 13179 18868 0.077767 0.113598 P22 1 1 1240 -1.46 -0.165 mopA b4143 "GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein" Cell processes factor; Chaperones b4144 2976 2967 1.00 0.001 740 1357 -1.83 -0.263 2971 1049 0.017534 0.006313 J13 4 3 4181 2.78 0.444 yjeI b4144 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4145 948 941 1.01 0.003 475 675 -1.35 -0.130 944 575 0.005573 0.003461 L13 4 3 4182 1.61 0.207 yjeJ b4145 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4146 410 401 1.00 0.000 535 624 -1.17 -0.067 405 579 0.002392 0.003488 N13 4 3 4183 -1.16 -0.066 yjeK b4146 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4147 1769 2032 -1.15 -0.060 4504 5413 -1.20 -0.080 1900 4958 0.011214 0.029851 A3 4 2 1833 -2.66 -0.425 efp b4147 elongation factor P (EF-P) "Translation, post-translational modification" factor; Proteins - translation and modification b4148 1694 1840 -1.09 -0.036 1086 980 1.11 0.045 1767 1033 0.010426 0.006218 J15 4 2 2653 1.68 0.224 sugE b4148 "suppresses groEL, may be chaperone" Putative factors putative factor; Not classified b4149 6799 5726 1.19 0.075 3823 3810 1.00 0.001 6263 3816 0.036953 0.022976 I4 3 1 589 1.61 0.206 blc b4149 outer membrane lipoprotein (lipocalin) Cell structure "membrane; Macromolecule synthesis, modification: Lipoprotein" b4150 3273 2812 1.16 0.066 2966 2937 1.01 0.004 3042 2951 0.017952 0.017768 B24 1 1 1241 1.01 0.004 ampC b4150 beta-lactamase; penicillin resistance Cell processes enzyme; Drug/analog sensitivity b4151 2713 2604 1.04 0.018 1014 1057 -1.04 -0.018 2659 1035 0.015688 0.006233 J14 4 1 1493 2.52 0.401 frdD b4151 "fumarate reductase, anaerobic, membrane anchor polypeptide" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4152 147 277 -1.00 0.000 36 173 -1.00 0.000 212 104 0.001252 0.000628 L14 4 1 1494 1.00 0.000 frdC b4152 "fumarate reductase, anaerobic, membrane anchor polypeptide" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4153 871 917 -1.05 -0.022 1142 1004 1.14 0.056 894 1073 0.005274 0.006460 N14 4 1 1495 -1.22 -0.088 frdB b4153 "fumarate reductase, anaerobic, iron-sulfur protein subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4154 3472 3116 1.11 0.047 1808 1977 -1.09 -0.039 3294 1892 0.019436 0.011393 P14 4 1 1496 1.71 0.232 frdA b4154 "fumarate reductase, anaerobic, flavoprotein subunit" Energy metabolism "enzyme; Energy metabolism, carbon: Anaerobic respiration" b4155 730 722 1.01 0.005 1034 771 1.34 0.127 726 903 0.004284 0.005435 P13 4 3 4184 -1.27 -0.103 yjeA b4155 putative lysyl-tRNA synthetase Putative enzymes "putative enzyme; Aminoacyl tRNA synthetases, tRNA modification" b4156 3471 3305 1.05 0.021 3300 3409 -1.03 -0.014 3388 3355 0.019991 0.020198 D23 3 1 1050 -1.01 -0.004 yjeM b4156 putative transport Putative transport proteins putative transport; Not classified b4157 -57 26 -1.00 0.000 23 14 1.00 0.000 -15 18 -0.000090 0.000111 B15 4 3 4185 -1.00 0.000 yjeN b4157 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4158 124 97 1.00 0.000 -22 151 -1.00 0.000 110 64 0.000652 0.000387 D15 4 3 4186 1.00 0.000 yjeO b4158 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4159 10304 9050 1.14 0.056 9171 7738 1.19 0.074 9677 8455 0.057100 0.050901 E14 3 1 627 1.12 0.050 yjeP b4159 putative periplasmic binding protein Putative transport proteins putative transport; Not classified b4160 4608 4876 -1.06 -0.025 5345 5551 -1.04 -0.016 4742 5448 0.027979 0.032800 K18 2 2 2086 -1.17 -0.069 psd b4160 phosphatidylserine decarboxylase; phospholipid synthesis Fatty acid and phospholipid metabolism "enzyme; Macromolecule synthesis, modification: Phospholipids" b4161 717 646 1.11 0.045 567 856 -1.51 -0.179 681 712 0.004020 0.004285 F15 4 3 4187 -1.07 -0.028 yjeQ b4161 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4162 1119 1132 -1.01 -0.005 1339 1444 -1.08 -0.033 1126 1391 0.006643 0.008378 H15 4 3 4188 -1.26 -0.101 yjeR b4162 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4166 1079 1108 -1.03 -0.012 594 857 -1.44 -0.159 1094 725 0.006454 0.004366 J15 4 3 4189 1.48 0.170 yjeS b4166 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4167 848 1102 -1.30 -0.114 776 696 1.11 0.047 975 736 0.005754 0.004430 L15 4 3 4190 1.30 0.114 yjeF b4167 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4168 2128 3539 -1.66 -0.221 2739 3108 -1.13 -0.055 2834 2924 0.016721 0.017602 N15 4 3 4191 -1.05 -0.022 yjeE b4168 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4169 1291 1719 -1.33 -0.124 922 1240 -1.34 -0.129 1505 1081 0.008881 0.006508 I22 2 1 565 1.36 0.135 amiB b4169 N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase Cell structure "enzyme; Murein sacculus, peptidoglycan" b4170 3655 2848 1.28 0.108 2272 2013 1.13 0.053 3252 2142 0.019187 0.012897 E17 1 2 1603 1.49 0.173 mutL b4170 enzyme in methyl-directed mismatch repair "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b4171 4335 5198 -1.20 -0.079 1920 2271 -1.18 -0.073 4766 2095 0.028124 0.012615 C3 4 2 1834 2.23 0.348 miaA b4171 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b4172 20764 19327 1.07 0.031 9331 10180 -1.09 -0.038 20045 9756 0.118280 0.058734 G2 1 1 388 2.01 0.304 hfq b4172 "host factor I for bacteriophage Q beta replication, a growth-related protein" "Phage, transposon, or plasmid" putative factor; Phage-related functions and prophages b4173 2327 4379 -1.88 -0.275 1919 2779 -1.45 -0.161 3353 2349 0.019785 0.014142 E3 4 2 1835 1.40 0.146 hflX b4173 GTP - binding subunit of protease specific for phage lambda cII repressor Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b4174 8565 5438 1.58 0.197 4334 5434 -1.25 -0.098 7001 4884 0.041313 0.029404 G3 4 2 1836 1.41 0.148 hflK b4174 protease specific for phage lambda cII repressor Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b4175 4514 4503 1.00 0.001 5715 5371 1.06 0.027 4508 5543 0.026603 0.033372 I3 4 2 1837 -1.25 -0.098 hflC b4175 protease specific for phage lambda cII repressor Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b4176 1808 2131 -1.18 -0.071 1089 1159 -1.06 -0.027 1970 1124 0.011622 0.006767 P15 4 3 4192 1.72 0.235 yjeT b4176 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4177 4032 3537 1.14 0.057 6415 6599 -1.03 -0.012 3784 6507 0.022331 0.039178 K4 2 2 2030 -1.75 -0.244 purA b4177 adenylosuccinate synthetase Nucleotide biosynthesis and metabolism enzyme; Purine ribonucleotide biosynthesis b4178 -5 71 -1.00 0.000 19 7 1.00 0.000 33 13 0.000195 0.000078 B17 4 3 4193 1.00 0.000 yjeB b4178 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4179 9121 9346 -1.02 -0.011 3823 4178 -1.09 -0.039 9233 4000 0.054482 0.024084 D17 4 3 4194 2.26 0.355 vacB b4179 putative enzyme Putative enzymes putative enzyme; Not classified b4180 921 965 -1.05 -0.020 1032 1122 -1.09 -0.037 943 1077 0.005565 0.006484 F17 4 3 4195 -1.17 -0.066 yjfH b4180 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4181 284 211 1.00 0.000 236 145 1.00 0.000 248 190 0.001463 0.001146 H17 4 3 4196 1.00 0.000 yjfI b4181 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4182 852 442 1.70 0.232 449 345 1.00 0.000 647 397 0.003818 0.002390 G14 3 1 628 1.27 0.105 yjfJ b4182 putative alpha helical protein "Hypothetical, unclassified, unknown" phenotype; Not classified b4183 596 370 1.19 0.077 612 595 1.03 0.013 483 604 0.002851 0.003634 J17 4 3 4197 -1.21 -0.083 yjfK b4183 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4184 558 422 1.12 0.048 398 445 -1.00 0.000 490 421 0.002891 0.002536 L17 4 3 4198 1.00 0.000 yjfL b4184 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4185 6886 6406 1.07 0.031 6659 6388 1.04 0.018 6646 6523 0.039215 0.039275 N17 4 3 4199 -1.00 -0.001 yjfM b4185 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4186 884 844 1.05 0.020 421 553 -1.11 -0.044 864 487 0.005096 0.002933 P5 4 2 2616 1.70 0.230 yjfC b4186 putative synthetase/amidase Putative enzymes putative enzyme; Not classified b4187 35404 24990 1.42 0.151 4829 4918 -1.02 -0.008 30197 4874 0.178183 0.029342 G17 1 2 1604 6.07 0.783 aidB b4187 putative acyl coenzyme A dehydrogenase Putative enzymes putative enzyme; Not classified b4188 1536 1361 1.13 0.053 851 872 -1.02 -0.011 1448 861 0.008546 0.005185 P17 4 3 4200 1.65 0.217 yjfN b4188 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4189 146 47 1.00 0.000 -27 129 -1.00 0.000 96 51 0.000569 0.000305 B19 4 3 4201 1.00 0.000 yjfO b4189 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4190 249 15 1.00 0.000 85 349 -1.00 0.000 132 217 0.000780 0.001307 D19 4 3 4202 -1.00 0.000 yjfP b4190 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4191 2063 2024 1.02 0.008 2643 2667 -1.01 -0.004 2044 2655 0.012059 0.015984 G3 4 1 300 -1.33 -0.122 yjfQ b4191 putative DEOR-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b4192 597 598 -1.00 -0.001 548 1046 -1.91 -0.281 598 797 0.003526 0.004798 F19 4 3 4203 -1.36 -0.134 yjfR b4192 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4193 550 613 -1.11 -0.047 1306 1305 1.00 0.000 581 1305 0.003430 0.007859 H19 4 3 4204 -2.29 -0.360 sgaT b4193 "orf, hypothetical protein" Putative transport proteins orf; Unknown b4194 397 326 1.00 0.000 232 299 -1.00 0.000 361 266 0.002130 0.001600 J19 4 3 4205 1.00 0.000 sgaB b4194 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4195 1610 1696 -1.05 -0.023 2744 2410 1.14 0.056 1653 2577 0.009753 0.015513 F23 3 1 1051 -1.59 -0.202 ptxA b4195 putative PTS system enzyme II A component Putative transport proteins putative transport; Not classified b4196 787 847 -1.08 -0.032 1266 1340 -1.06 -0.024 817 1303 0.004819 0.007846 L19 4 3 4206 -1.63 -0.212 sgaH b4196 probable hexulose-6-phosphate synthase Putative enzymes "putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b4197 11123 9681 1.15 0.060 12206 13203 -1.08 -0.034 10402 12704 0.061379 0.076488 N19 4 3 4207 -1.25 -0.096 sgaU b4197 putative hexulose-6-phosphate isomerase Putative enzymes "putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b4198 200 518 -1.04 -0.015 227 581 -1.16 -0.066 359 404 0.002119 0.002434 C7 2 1 122 -1.00 0.000 sgaE b4198 putative epimerase/aldolase Putative enzymes putative enzyme; Not classified b4199 2169 2119 1.02 0.010 3107 3256 -1.05 -0.020 2144 3182 0.012651 0.019155 P19 4 3 4208 -1.51 -0.180 yjfY b4199 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4200 22973 25293 -1.10 -0.042 45248 53164 -1.17 -0.070 24133 49206 0.142400 0.296248 K3 4 2 1838 -2.08 -0.318 rpsF b4200 30S ribosomal subunit protein S6 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b4201 7676 6649 1.15 0.062 15354 16142 -1.05 -0.022 7163 15748 0.042265 0.094811 I17 1 2 1605 -2.24 -0.351 priB b4201 primosomal replication protein N "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b4202 1370 1429 -1.04 -0.018 5980 5922 1.01 0.004 1399 5951 0.008258 0.035830 M3 4 2 1839 -4.34 -0.637 rpsR b4202 30S ribosomal subunit protein S18 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b4203 3775 3528 1.07 0.029 14432 14501 -1.00 -0.002 3651 14467 0.021546 0.087097 O3 4 2 1840 -4.04 -0.607 rplI b4203 50S ribosomal subunit protein L9 "Translation, post-translational modification" "structural component; Ribosomal proteins - synthesis, modification" b4204 116 202 -1.00 0.000 213 214 -1.00 0.000 159 213 0.000938 0.001284 B21 4 3 4209 -1.00 0.000 yjfZ b4204 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4205 1215 1380 -1.14 -0.055 4031 4422 -1.10 -0.040 1297 4227 0.007654 0.025448 D21 4 3 4210 -3.32 -0.522 ytfA b4205 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4206 1032 1025 1.01 0.003 1215 1080 1.13 0.051 1029 1147 0.006071 0.006907 F21 4 3 4211 -1.14 -0.056 ytfB b4206 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4207 5267 4050 1.30 0.114 5368 5521 -1.03 -0.012 4659 5445 0.027489 0.032779 A5 4 2 1841 -1.19 -0.076 fklB b4207 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) "Translation, post-translational modification" enzyme; Proteins - translation and modification b4208 3185 4068 -1.28 -0.106 2385 2557 -1.07 -0.030 3627 2471 0.021400 0.014875 J9 2 1 901 1.44 0.158 cycA b4208 "transport of D-alanine, D-serine, and glycine" Transport and binding proteins "transport; Transport of small molecules: Amino acids, amines" b4209 1305 1626 -1.25 -0.096 4146 3864 1.07 0.031 1465 4005 0.008647 0.024111 H21 4 3 4212 -2.79 -0.445 ytfE b4209 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4210 153 341 -1.00 0.000 333 282 1.00 0.000 247 307 0.001457 0.001850 J21 4 3 4213 -1.00 0.000 ytfF b4210 putative transmembrane subunit putative membrane protein putative membrane; Not classified b4211 3415 2921 1.17 0.068 5664 5493 1.03 0.013 3168 5579 0.018694 0.033588 L21 4 3 4214 -1.80 -0.254 ytfG b4211 putative oxidoreductase Putative enzymes putative enzyme; Not classified b4212 20461 20235 1.01 0.005 42996 41744 1.03 0.013 20348 42370 0.120066 0.255090 N21 4 3 4215 -2.12 -0.327 ytfH b4212 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4213 977 1238 -1.27 -0.103 736 1084 -1.47 -0.168 1108 910 0.006537 0.005480 M4 2 2 2031 1.19 0.077 cpdB b4213 2':3'-cyclic-nucleotide 2'-phosphodiesterase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b4214 1809 1832 -1.01 -0.005 1189 1761 -1.48 -0.171 1820 1475 0.010742 0.008881 O16 4 2 2272 1.21 0.083 cysQ b4214 affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis Central intermediary metabolism phenotype; Central intermediary metabolism: Sulfur metabolism b4215 1928 1839 1.05 0.020 3353 3926 -1.17 -0.068 1884 3640 0.011115 0.021913 P21 4 3 4216 -1.97 -0.295 ytfI b4215 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4216 363 266 1.00 0.000 727 672 1.08 0.034 315 700 0.001856 0.004211 B23 4 3 4217 -1.40 -0.147 ytfJ b4216 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4217 859 1303 -1.52 -0.181 370 532 -1.06 -0.027 1081 451 0.006377 0.002716 D23 4 3 4218 2.13 0.327 ytfK b4217 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4218 6810 6749 1.01 0.004 3927 3756 1.05 0.019 6779 3842 0.040003 0.023129 B7 4 2 2617 1.73 0.238 ytfL b4218 putative transport protein Putative transport proteins putative transport; Not classified b4219 1566 1715 -1.10 -0.039 1239 1071 1.16 0.064 1640 1155 0.009678 0.006954 C5 4 2 1842 1.39 0.144 msrA b4219 peptide methionine sulfoxide reductase "Translation, post-translational modification" enzyme; Proteins - translation and modification b4220 1405 1423 -1.01 -0.006 1376 1339 1.03 0.012 1414 1357 0.008342 0.008173 F23 4 3 4219 1.02 0.009 ytfM b4220 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4221 295 270 1.00 0.000 440 471 -1.00 0.000 282 455 0.001664 0.002742 H23 4 3 4220 -1.00 0.000 ytfN b4221 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4222 1058 1155 -1.09 -0.038 643 759 -1.18 -0.072 1107 701 0.006531 0.004222 J23 4 3 4221 1.55 0.189 ytfP b4222 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4223 1239 1885 -1.52 -0.182 1958 2149 -1.10 -0.040 1562 2053 0.009216 0.012361 L23 4 3 4222 -1.34 -0.128 yjfA b4223 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4224 9338 9237 1.01 0.005 5371 5511 -1.03 -0.011 9288 5441 0.054804 0.032756 L15 4 2 2654 1.67 0.224 chpS b4224 "suppressor of inhibitory function of ChpB, PemI-like, autoregulated" Cell processes phenotype; Not classified b4225 3107 3242 -1.04 -0.018 1789 1756 1.02 0.008 3175 1772 0.018735 0.010671 N15 4 2 2655 1.76 0.244 chpB b4225 "probable growth inhibitor, PemK-like, autoregulated" Putative factors putative factor; Not classified b4226 4542 3784 1.20 0.079 5020 5181 -1.03 -0.014 4163 5100 0.024563 0.030706 A18 4 2 2273 -1.25 -0.097 ppa b4226 inorganic pyrophosphatase Central intermediary metabolism "enzyme; Central intermediary metabolism: Pool, multipurpose conversions" b4227 1150 1013 1.13 0.055 1020 823 1.24 0.093 1082 922 0.006382 0.005548 H23 3 1 1052 1.15 0.061 ytfQ b4227 putative LACI-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b4228 2619 2202 1.19 0.075 2284 2438 -1.07 -0.028 2411 2361 0.014224 0.014214 J23 3 1 1053 1.00 0.000 ytfR b4228 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b4229 497 242 1.00 0.000 353 490 -1.00 0.000 370 421 0.002180 0.002537 L23 3 1 1054 -1.00 0.000 ytfS b4229 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b4230 961 1226 -1.28 -0.106 1335 1526 -1.14 -0.058 1093 1431 0.006451 0.008613 N23 3 1 1055 -1.34 -0.126 ytfT b4230 putative transport system permease protein Putative transport proteins putative transport; Not classified b4231 1326 1685 -1.27 -0.104 2215 2260 -1.02 -0.009 1506 2238 0.008885 0.013471 P23 3 1 1056 -1.52 -0.181 yjfF b4231 putative transport system permease protein Putative transport proteins putative transport; Not classified b4232 5688 5090 1.12 0.048 4571 4908 -1.07 -0.031 5389 4740 0.031799 0.028535 C18 4 2 2274 1.11 0.047 fbp b4232 fructose-bisphosphatase Central intermediary metabolism enzyme; Central intermediary metabolism: Gluconeogenesis b4233 1233 1291 -1.05 -0.020 608 900 -1.48 -0.170 1262 754 0.007444 0.004541 K22 2 1 566 1.64 0.215 yjfG b4233 putative ligase Putative enzymes putative enzyme; Not classified b4234 2195 1996 1.10 0.041 1577 1532 1.03 0.013 2095 1555 0.012364 0.009360 I14 3 1 629 1.32 0.121 yjgA b4234 putative alpha helix protein "Hypothetical, unclassified, unknown" phenotype; Not classified b4235 5854 4773 1.23 0.089 2806 3136 -1.12 -0.048 5314 2971 0.031356 0.017888 E5 4 2 1843 1.75 0.244 pmbA b4235 "maturation of antibiotic MccB17, see tld genes" "Hypothetical, unclassified, unknown" phenotype; Proteins - translation and modification b4236 998 812 1.23 0.090 425 492 -1.00 0.000 905 458 0.005340 0.002759 B16 4 1 1497 1.78 0.250 cybC b4236 cytochrome b(562) Energy metabolism "enzyme; Energy metabolism, carbon: Electron transport" b4237 2245 2620 -1.17 -0.067 2270 2112 1.07 0.031 2432 2191 0.014353 0.013190 E18 4 2 2275 1.09 0.037 nrdG b4237 anaerobic ribonucleotide reductase activating protein Nucleotide biosynthesis and metabolism enzyme; Central intermediary metabolism: Nucleotide interconversions b4238 8490 7608 1.12 0.048 6903 6880 1.00 0.001 8049 6892 0.047493 0.041492 O4 2 2 2032 1.14 0.059 nrdD b4238 anaerobic ribonucleoside-triphosphate reductase Nucleotide biosynthesis and metabolism enzyme; 2'-Deoxyribonucleotide metabolism b4239 172 919 -1.84 -0.264 514 1124 -2.19 -0.340 545 819 0.003219 0.004932 E7 2 1 123 -1.53 -0.185 treC b4239 trehalase 6-P hydrolase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b4240 1345 1390 -1.03 -0.014 1117 1249 -1.12 -0.048 1368 1183 0.008069 0.007121 L9 2 1 902 1.13 0.054 treB b4240 "PTS system enzyme II, trehalose specific" Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4241 3015 3039 -1.01 -0.003 3726 3399 1.10 0.040 3027 3563 0.017861 0.021448 D24 1 1 1242 -1.20 -0.079 treR b4241 "repressor of treA,B,C" Regulatory function regulator; Osmotic adaptation b4242 62 76 -1.00 0.000 16 79 -1.00 0.000 69 48 0.000405 0.000288 N9 2 1 903 1.00 0.000 mgtA b4242 "Mg2+ transport ATPase, P-type 1" Transport and binding proteins enzyme; Transport of small molecules: Cations b4243 3768 2649 1.42 0.153 7335 8318 -1.13 -0.055 3208 7826 0.018932 0.047119 N23 4 3 4223 -2.49 -0.396 yjgF b4243 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4244 2493 1828 1.36 0.135 190 416 -1.00 0.000 2161 303 0.012750 0.001824 A6 2 2 2033 4.25 0.628 pyrI b4244 "aspartate carbamoyltransferase, regulatory subunit" Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b4245 5713 4519 1.26 0.102 1502 1946 -1.30 -0.112 5116 1724 0.030189 0.010379 C6 2 2 2034 2.91 0.464 pyrB b4245 "aspartate carbamoyltransferase, catalytic subunit" Nucleotide biosynthesis and metabolism enzyme; Pyrimidine ribonucleotide biosynthesis b4246 1172 1227 -1.05 -0.020 562 1358 -2.41 -0.383 1200 960 0.007079 0.005780 E6 2 2 2035 1.22 0.088 pyrL b4246 pyrBI operon leader peptide Nucleotide biosynthesis and metabolism leader; Pyrimidine ribonucleotide biosynthesis b4247 2363 1564 1.51 0.179 4083 3449 1.18 0.073 1964 3766 0.011587 0.022672 P23 4 3 4224 -1.96 -0.292 yjgG b4247 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4248 8629 8448 1.02 0.009 10460 11631 -1.11 -0.046 8539 11045 0.050384 0.066499 B2 1 3 4225 -1.32 -0.121 yjgH b4248 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4249 317 675 -1.35 -0.131 300 699 -1.40 -0.145 496 499 0.002928 0.003006 M18 2 2 2087 -1.00 -0.001 yjgI b4249 putative oxidoreductase Putative enzymes putative enzyme; Not classified b4250 1799 1650 1.09 0.037 1509 1310 1.15 0.061 1725 1410 0.010177 0.008487 D2 1 3 4226 1.20 0.079 b4250 b4250 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4251 6738 6794 -1.01 -0.004 4536 4648 -1.02 -0.011 6766 4592 0.039926 0.027648 F2 1 3 4227 1.44 0.160 yjgJ b4251 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4252 5968 5851 1.02 0.009 3037 3139 -1.03 -0.014 5910 3088 0.034871 0.018589 H2 1 3 4228 1.88 0.273 yjgK b4252 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4253 2391 2474 -1.03 -0.015 1596 1522 1.05 0.021 2432 1559 0.014353 0.009389 J2 1 3 4229 1.53 0.184 yjgL b4253 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4254 1012 805 1.26 0.100 770 390 1.54 0.188 909 580 0.005361 0.003494 E16 1 2 1979 1.53 0.186 argI b4254 ornithine carbamoyltransferase 1 Amino acid biosynthesis enzyme; Amino acid biosynthesis: Arginine b4255 6463 5025 1.29 0.109 6504 6783 -1.04 -0.018 5744 6644 0.033894 0.039999 L2 1 3 4230 -1.18 -0.072 yjgD b4255 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4256 4362 4160 1.05 0.021 6857 8127 -1.19 -0.074 4261 7492 0.025142 0.045105 N2 1 3 4231 -1.79 -0.254 b4256 b4256 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4257 1250 694 1.80 0.255 710 978 -1.38 -0.139 972 844 0.005734 0.005083 P2 1 3 4232 1.13 0.052 yjgN b4257 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4258 6150 5325 1.15 0.063 5436 5647 -1.04 -0.017 5738 5542 0.033857 0.033364 G5 4 2 1844 1.01 0.006 valS b4258 valine tRNA synthetase "Translation, post-translational modification" "enzyme; Aminoacyl tRNA synthetases, tRNA modification" b4259 2727 2314 1.18 0.071 2277 2183 1.04 0.018 2520 2230 0.014872 0.013427 K17 1 2 1606 1.11 0.044 holC b4259 "DNA polymerase III, chi subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b4260 4169 4647 -1.11 -0.047 4034 3546 1.14 0.056 4408 3790 0.026012 0.022819 I5 4 2 1845 1.14 0.057 pepA b4260 aminopeptidase A/I Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b4261 2327 1980 1.18 0.070 3075 2683 1.15 0.059 2153 2879 0.012707 0.017332 B4 1 3 4233 -1.36 -0.135 yjgP b4261 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4262 1006 859 1.17 0.069 1224 1147 1.07 0.028 932 1186 0.005502 0.007138 D4 1 3 4234 -1.30 -0.113 yjgQ b4262 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4263 37014 33595 1.10 0.042 29819 28759 1.04 0.016 35305 29289 0.208323 0.176335 F4 1 3 4235 1.18 0.072 yjgR b4263 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4264 326 529 -1.06 -0.025 299 172 1.00 0.000 427 236 0.002522 0.001420 I3 4 1 301 1.00 0.000 idnR b4264 L-idonate operon regulator Regulatory function putative regulator; Not classified b4265 421 583 -1.17 -0.067 63 492 -1.00 0.000 502 277 0.002964 0.001670 G7 2 1 124 1.00 0.000 idnT b4265 L-Idonate transporter Transport and binding proteins putative transport; Not classified b4266 3055 2339 1.31 0.116 1851 1796 1.03 0.013 2697 1824 0.015915 0.010980 D7 4 2 2618 1.45 0.161 idnO b4266 5-ketogluconate:gluconate oxidoreductase Carbon compound catabolism putative enzyme; Not classified b4267 2459 1817 1.35 0.131 1172 1140 1.03 0.012 2138 1156 0.012617 0.006959 F7 4 2 2619 1.81 0.258 idnD b4267 L-idonate dehydrogenase Carbon compound catabolism putative enzyme; Not classified b4268 101 161 -1.00 0.000 83 66 1.00 0.000 131 74 0.000773 0.000448 I7 2 1 125 1.00 0.000 idnK b4268 gluconate kinase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b4269 4180 5134 -1.23 -0.089 3220 2971 1.08 0.035 4657 3095 0.027480 0.018636 H7 4 2 2620 1.47 0.169 yjgB b4269 putative oxidoreductase Putative enzymes putative enzyme; Not classified b4271 1148 665 1.73 0.237 599 587 1.02 0.009 907 593 0.005350 0.003569 I2 1 1 389 1.50 0.176 intB b4271 prophage P4 integrase "Phage, transposon, or plasmid" "IS, phage, Tn; Phage-related functions and prophages" b4272 29211 30432 -1.04 -0.018 12055 12190 -1.01 -0.005 29821 12122 0.175966 0.072982 H4 1 3 4236 2.41 0.382 yi21_6 b4272 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b4273 2182 2344 -1.07 -0.031 1415 1341 1.06 0.023 2263 1378 0.013354 0.008296 K2 1 1 390 1.61 0.207 yi22_6 b4273 IS2 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b4274 6339 6674 -1.05 -0.022 3266 3214 1.02 0.007 6507 3240 0.038394 0.019507 J4 1 3 4237 1.97 0.294 yjgW b4274 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4275 2824 2470 1.14 0.058 5409 4903 1.10 0.043 2647 5156 0.015619 0.031040 L4 1 3 4238 -1.99 -0.298 yjgX b4275 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4276 851 845 1.01 0.003 1503 1793 -1.19 -0.076 848 1648 0.005002 0.009922 N4 1 3 4239 -1.98 -0.297 yjgY b4276 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4277 248 147 1.00 0.000 113 240 -1.00 0.000 197 177 0.001164 0.001063 P4 1 3 4240 1.00 0.000 yjgZ b4277 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4278 567 371 1.13 0.055 753 627 1.20 0.080 469 690 0.002767 0.004154 B6 1 3 4241 -1.38 -0.141 yi41 b4278 IS4 hypothetical protein "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b4279 158 172 -1.00 0.000 139 54 1.00 0.000 165 96 0.000975 0.000581 D6 1 3 4242 1.00 0.000 yjhB b4279 putative transport protein Putative transport proteins putative transport; Not classified b4280 2866 3945 -1.38 -0.139 3078 2862 1.08 0.032 3405 2970 0.020094 0.017882 J7 4 2 2621 1.12 0.051 yjhC b4280 putative dehydrogenase "Hypothetical, unclassified, unknown" orf; Not classified b4281 5756 5400 1.07 0.028 2913 2876 1.01 0.006 5578 2895 0.032914 0.017428 F6 1 3 4243 1.89 0.276 yjhD b4281 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4282 2442 2609 -1.07 -0.029 1184 1202 -1.01 -0.006 2525 1193 0.014902 0.007183 H6 1 3 4244 2.07 0.317 yjhE b4282 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4283 267 234 1.00 0.000 16 68 -1.00 0.000 251 42 0.001478 0.000252 J6 1 3 4245 1.00 0.000 yi91b b4283 IS911 hypothetical protein (IS911B) "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b4284 6652 5901 1.13 0.052 2207 2103 1.05 0.021 6277 2155 0.037038 0.012974 M2 1 1 391 2.85 0.456 tra8_3 b4284 IS30 transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b4285 3398 2708 1.25 0.099 2536 2741 -1.08 -0.034 3053 2638 0.018014 0.015884 O2 1 1 392 1.13 0.055 b4285 b4285 putative transposase "Phage, transposon, or plasmid" "IS, phage, Tn; Not classified" b4286 85 44 1.00 0.000 70 123 -1.00 0.000 65 97 0.000383 0.000581 L6 1 3 4246 -1.00 0.000 b4286 b4286 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4287 410 701 -1.40 -0.147 907 884 1.03 0.011 556 895 0.003278 0.005390 P9 2 1 904 -1.64 -0.216 fecE b4287 ATP-binding component of citrate-dependent iron(III) transport protein Transport and binding proteins transport; Transport of small molecules: Cations b4288 1155 1681 -1.45 -0.163 558 1770 -3.17 -0.501 1418 1164 0.008366 0.007009 B11 2 1 905 1.19 0.077 fecD b4288 "citrate-dependent iron transport, membrane-bound protein" Transport and binding proteins transport; Transport of small molecules: Cations b4289 4831 4412 1.10 0.039 4919 6571 -1.34 -0.126 4621 5745 0.027269 0.034588 D11 2 1 906 -1.27 -0.103 fecC b4289 "citrate-dependent iron(III) transport protein, cytosolic" Transport and binding proteins transport; Transport of small molecules: Cations b4290 348 360 -1.00 0.000 1029 1393 -1.35 -0.132 354 1211 0.002092 0.007289 F11 2 1 907 -2.43 -0.386 fecB b4290 "citrate-dependent iron transport, periplasmic protein" Transport and binding proteins transport; Transport of small molecules: Cations b4291 2480 2836 -1.14 -0.058 4627 4906 -1.06 -0.025 2658 4767 0.015683 0.028697 H11 2 1 908 -1.83 -0.262 fecA b4291 "outer membrane receptor; citrate-dependent iron transport, outer membrane receptor" Transport and binding proteins membrane; Transport of small molecules: Cations b4292 329 705 -1.41 -0.149 70 236 -1.00 0.000 517 153 0.003051 0.000921 J11 2 1 909 1.02 0.007 fecR b4292 "regulator for fec operon, periplasmic" Regulatory function regulator; Transport of small molecules: Cations b4293 601 744 -1.24 -0.093 56 202 -1.00 0.000 672 129 0.003968 0.000776 L11 2 1 910 1.32 0.121 fecI b4293 probable RNA polymerase sigma factor Regulatory function regulator; Global regulatory functions b4294 26095 23672 1.10 0.042 15672 16085 -1.03 -0.011 24884 15879 0.146831 0.095599 A4 1 1 393 1.54 0.186 insA_7 b4294 IS1 protein InsA "Phage, transposon, or plasmid" "IS, phage, Tn; Transposon-related functions" b4295 1071 1247 -1.17 -0.066 1362 1309 1.04 0.017 1159 1336 0.006839 0.008041 N6 1 3 4247 -1.18 -0.070 yjhU b4295 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4296 240 443 -1.00 0.000 11 304 -1.00 0.000 342 158 0.002016 0.000949 K7 2 1 126 1.00 0.000 yjhF b4296 putative transport system permease Putative transport proteins putative transport; Not classified b4297 7059 6977 1.01 0.005 8242 7853 1.05 0.021 7018 8047 0.041413 0.048450 L7 4 2 2622 -1.17 -0.068 yjhG b4297 putative dehydratase Putative enzymes putative enzyme; Not classified b4298 942 882 1.07 0.028 1154 1200 -1.04 -0.017 912 1177 0.005380 0.007089 P6 1 3 4248 -1.32 -0.120 yjhH b4298 putative lyase/synthase Putative enzymes putative enzyme; Not classified b4299 107 226 -1.00 0.000 136 108 1.00 0.000 166 122 0.000981 0.000735 K3 4 1 302 1.00 0.000 yjhI b4299 putative regulator Putative regulatory proteins putative regulator; Not classified b4300 69 87 -1.00 0.000 56 115 -1.00 0.000 78 86 0.000460 0.000516 M3 4 1 303 -1.00 0.000 sgcR b4300 putative DEOR-type transcriptional regulator Putative regulatory proteins putative regulator; Not classified b4301 235 173 1.00 0.000 538 613 -1.14 -0.057 204 575 0.001205 0.003464 B8 1 3 4249 -1.15 -0.062 sgcE b4301 putative epimerase Putative enzymes putative enzyme; Not classified b4302 167 243 -1.00 0.000 62 53 1.00 0.000 205 58 0.001209 0.000347 D8 1 3 4250 1.00 0.000 sgcA b4302 putative PTS system enzyme II A component Putative transport proteins putative transport; Not classified b4303 1309 1629 -1.25 -0.095 1061 1043 1.02 0.008 1469 1052 0.008667 0.006334 N7 4 2 2623 1.37 0.136 sgcQ b4303 putative nucleoside triphosphatase Putative enzymes putative enzyme; Not classified b4304 144 184 -1.00 0.000 81 102 -1.00 0.000 164 92 0.000968 0.000552 N11 2 1 911 1.00 0.000 sgcC b4304 putative PTS system enzyme IIC component Putative transport proteins putative transport; Not classified b4305 321 265 1.00 0.000 297 287 1.00 0.000 293 292 0.001729 0.001759 F8 1 3 4251 -1.00 0.000 sgcX b4305 putative lyase/synthase Putative enzymes putative enzyme; Not classified b4306 1198 1186 1.01 0.004 733 668 1.10 0.040 1192 701 0.007034 0.004218 P7 4 2 2624 1.67 0.222 yjhP b4306 putative methyltransferase Putative enzymes putative enzyme; Not classified b4307 1776 2044 -1.15 -0.061 1606 1673 -1.04 -0.018 1910 1639 0.011271 0.009870 H8 1 3 4252 1.14 0.058 yjhQ b4307 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4308 487 407 1.00 0.000 260 445 -1.00 0.000 447 352 0.002638 0.002121 B9 4 2 2625 1.00 0.000 yjhR b4308 putative frameshift suppressor Putative regulatory proteins phenotype; Not classified b4309 632 445 1.26 0.102 424 391 1.00 0.000 538 408 0.003176 0.002455 J8 1 3 4253 1.06 0.025 yjhS b4309 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4310 267 194 1.00 0.000 56 12 1.00 0.000 231 34 0.001360 0.000205 L8 1 3 4254 1.00 0.000 yjhT b4310 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4311 39 18 1.00 0.000 132 224 -1.00 0.000 29 178 0.000171 0.001073 N8 1 3 4255 -1.00 0.000 yjhA b4311 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4312 289 338 -1.00 0.000 161 353 -1.00 0.000 314 257 0.001851 0.001548 M22 2 1 567 1.00 0.000 fimB b4312 recombinase involved in phase variation; regulator for fimA Regulatory function regulator; Surface structures b4313 173 232 -1.00 0.000 240 196 1.00 0.000 202 218 0.001195 0.001310 O22 2 1 568 -1.00 0.000 fimE b4313 recombinase involved in phase variation; regulator for fimA Regulatory function regulator; Surface structures b4314 6093 7205 -1.18 -0.073 3698 3774 -1.02 -0.009 6649 3736 0.039234 0.022493 L2 2 3 569 1.74 0.242 fimA b4314 major type 1 subunit fimbrin (pilin) Cell structure structural component; Surface structures b4315 3095 3378 -1.09 -0.038 1626 1908 -1.17 -0.069 3237 1767 0.019098 0.010638 C24 2 1 570 1.80 0.254 fimI b4315 fimbrial protein Cell structure structural component; Surface structures b4316 2342 1920 1.22 0.086 1616 1622 -1.00 -0.001 2131 1619 0.012576 0.009748 E24 2 1 571 1.29 0.111 fimC b4316 "periplasmic chaperone, required for type 1 fimbriae" Cell processes factor; Surface structures b4317 6999 6913 1.01 0.005 9917 10444 -1.05 -0.023 6956 10180 0.041046 0.061291 G24 2 1 572 -1.49 -0.174 fimD b4317 "outer membrane protein; export and assembly of type 1 fimbriae, interrupted" Cell structure membrane; Outer membrane constituents b4318 339 323 1.00 0.000 252 576 -1.15 -0.062 331 414 0.001954 0.002492 I24 2 1 573 -1.00 0.000 fimF b4318 fimbrial morphology Cell structure structural component; Surface structures b4319 92 551 -1.10 -0.042 292 279 1.00 0.000 321 286 0.001897 0.001720 K24 2 1 574 1.00 0.000 fimG b4319 fimbrial morphology Cell structure structural component; Surface structures b4320 131 191 -1.00 0.000 123 299 -1.00 0.000 161 211 0.000951 0.001273 M24 2 1 575 -1.00 0.000 fimH b4320 "minor fimbrial subunit, D-mannose specific adhesin" Cell structure structural component; Surface structures b4321 143 446 -1.00 0.000 -30 196 -1.00 0.000 294 83 0.001738 0.000497 P11 2 1 912 1.00 0.000 gntP b4321 gluconate transport system permease 3 Transport and binding proteins "transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" b4322 499 661 -1.32 -0.121 699 761 -1.09 -0.037 580 730 0.003424 0.004394 M7 2 1 127 -1.28 -0.108 uxuA b4322 mannonate hydrolase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b4323 1051 1110 -1.06 -0.024 930 966 -1.04 -0.016 1080 948 0.006375 0.005708 O7 2 1 128 1.12 0.048 uxuB b4323 D-mannonate oxidoreductase Carbon compound catabolism enzyme; Degradation of small molecules: Carbon compounds b4324 1680 1502 1.12 0.049 1097 1480 -1.35 -0.130 1591 1288 0.009389 0.007756 A9 2 1 129 1.21 0.083 uxuR b4324 regulator for uxu operon Regulatory function regulator; Degradation of small molecules: Carbon compounds b4325 135 53 1.00 0.000 90 85 1.00 0.000 94 88 0.000553 0.000528 P8 1 3 4256 1.00 0.000 yjiC b4325 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4326 160 31 1.00 0.000 201 262 -1.00 0.000 95 232 0.000563 0.001394 B10 1 3 4257 -1.00 0.000 yjiD b4326 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4327 3195 3932 -1.23 -0.090 2367 2151 1.10 0.042 3563 2259 0.021027 0.013598 O3 4 1 304 1.55 0.189 yjiE b4327 putative transcriptional regulator LYSR-type Putative regulatory proteins putative regulator; Not classified b4328 13023 13029 -1.00 0.000 11704 12544 -1.07 -0.030 13026 12124 0.076862 0.072995 K5 4 2 1846 1.05 0.022 iadA b4328 isoaspartyl dipeptidase Carbon compound catabolism "enzyme; Degradation of proteins, peptides, glyco" b4329 360 454 -1.00 0.000 273 269 1.00 0.000 407 271 0.002400 0.001629 D10 1 3 4258 1.00 0.000 yjiG b4329 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4330 2382 2843 -1.19 -0.077 1192 1340 -1.12 -0.051 2612 1266 0.015414 0.007621 F10 1 3 4259 2.02 0.306 yjiH b4330 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4331 4406 4634 -1.05 -0.022 2267 2268 -1.00 0.000 4520 2267 0.026671 0.013652 H10 1 3 4260 1.95 0.291 yjiI b4331 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4332 605 513 1.18 0.071 490 355 1.00 0.000 559 423 0.003298 0.002544 J10 1 3 4261 1.10 0.041 yjiJ b4332 putative transport protein Putative transport proteins putative transport; Not classified b4333 283 136 1.00 0.000 180 247 -1.00 0.000 210 214 0.001238 0.001286 L10 1 3 4262 -1.00 0.000 yjiK b4333 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4334 2528 2576 -1.02 -0.008 1230 1387 -1.13 -0.052 2552 1308 0.015061 0.007878 D9 4 2 2626 1.91 0.281 yjiL b4334 putative enzyme Putative enzymes putative enzyme; Not classified b4335 900 1220 -1.36 -0.132 1848 2061 -1.12 -0.048 1060 1954 0.006254 0.011766 N10 1 3 4263 -1.88 -0.275 yjiM b4335 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4336 1521 1226 1.24 0.094 2920 2967 -1.02 -0.007 1374 2943 0.008105 0.017721 P10 1 3 4264 -2.19 -0.340 yjiN b4336 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4337 10356 9938 1.04 0.018 7130 6594 1.08 0.034 10147 6862 0.059877 0.041315 B1 4 1 1057 1.45 0.161 yjiO b4337 putative transport protein Putative transport proteins putative transport; Not classified b4338 7 98 -1.00 0.000 256 84 1.00 0.000 53 170 0.000311 0.001023 B12 1 3 4265 -1.00 0.000 yjiP b4338 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4339 486 555 -1.11 -0.045 401 315 1.00 0.000 520 358 0.003071 0.002154 D12 1 3 4266 1.02 0.010 yjiQ b4339 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4340 499 566 -1.13 -0.054 330 644 -1.29 -0.110 532 487 0.003141 0.002931 A5 4 1 305 1.05 0.020 yjiR b4340 putative regulator Putative regulatory proteins putative regulator; Not classified b4341 25340 21402 1.18 0.073 15488 18113 -1.17 -0.068 23371 16801 0.137907 0.101149 F12 1 3 4267 1.36 0.135 yjiS b4341 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4342 15750 13263 1.19 0.075 7639 7666 -1.00 -0.002 14507 7652 0.085600 0.046071 H12 1 3 4268 1.86 0.269 yjiT b4342 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4343 827 943 -1.14 -0.057 772 1069 -1.38 -0.141 885 921 0.005222 0.005544 J12 1 3 4269 -1.06 -0.026 yjiU b4343 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4344 1275 2095 -1.64 -0.216 2815 3952 -1.40 -0.147 1685 3383 0.009942 0.020368 A9 2 2 1665 -2.05 -0.311 mcrD b4344 inhibits McrE 5-methylcytosine restriction system Regulatory function regulator; Degradation of DNA b4345 758 392 1.52 0.181 28 393 -1.00 0.000 575 211 0.003393 0.001267 C9 2 2 1666 1.13 0.053 mcrC b4345 "component of McrBC 5-methylcytosine restriction system, expands range of sequences restricted" "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b4346 1294 62 2.59 0.413 292 650 -1.30 -0.114 678 471 0.004001 0.002834 E9 2 2 1667 1.33 0.125 mcrB b4346 component of McrBC 5-methylcytosine restriction system "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b4347 4412 4988 -1.13 -0.053 3673 4063 -1.11 -0.044 4700 3868 0.027732 0.023287 L12 1 3 4270 1.19 0.076 yjiW b4347 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4348 603 637 -1.06 -0.024 883 906 -1.03 -0.011 620 895 0.003657 0.005387 M17 1 2 1607 -1.47 -0.168 hsdS b4348 specificity determinant for hsdM and hsdR "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b4349 21050 22259 -1.06 -0.024 8265 10677 -1.29 -0.111 21655 9471 0.127778 0.057021 O17 1 2 1608 2.24 0.350 hsdM b4349 host modification; DNA methylase M "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b4350 2880 2702 1.07 0.028 1687 1759 -1.04 -0.018 2791 1723 0.016468 0.010373 G9 2 2 1668 1.59 0.201 hsdR b4350 host restriction; endonuclease R "DNA replication, repair, restriction/modification" enzyme; Degradation of DNA b4351 2318 2381 -1.03 -0.012 1796 1871 -1.04 -0.018 2350 1833 0.013866 0.011036 A19 1 2 1609 1.26 0.099 mrr b4351 restriction of methylated adenine "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b4352 1147 1020 1.12 0.051 1322 1168 1.13 0.054 1084 1245 0.006395 0.007495 N12 1 3 4271 -1.17 -0.069 yjiA b4352 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4353 1185 1126 1.05 0.022 1765 1977 -1.12 -0.049 1156 1871 0.006819 0.011267 P12 1 3 4272 -1.65 -0.218 yjiX b4353 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4354 2182 2280 -1.05 -0.019 2505 2335 1.07 0.030 2231 2420 0.013166 0.014571 F24 1 1 1243 -1.11 -0.044 yjiY b4354 putative carbon starvation protein "Hypothetical, unclassified, unknown" orf; Not classified b4355 2526 2382 1.06 0.025 1406 1552 -1.10 -0.043 2454 1479 0.014480 0.008903 H24 1 1 1244 1.63 0.211 tsr b4355 "methyl-accepting chemotaxis protein I, serine sensor receptor" Regulatory function regulator; Chemotaxis and mobility b4356 533 572 -1.07 -0.031 178 255 -1.00 0.000 552 216 0.003259 0.001301 D1 4 1 1058 1.09 0.036 yjiZ b4356 "putative transport protein, cryptic, orf, joins former yjiZ and yjjL" Putative transport proteins putative transport; Not classified b4357 147 192 -1.00 0.000 283 215 1.00 0.000 170 249 0.001002 0.001500 B14 1 3 4273 -1.00 0.000 yjjM b4357 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4358 2949 2763 1.07 0.028 1812 1856 -1.02 -0.011 2856 1834 0.016852 0.011041 F9 4 2 2627 1.53 0.184 yjjN b4358 putative oxidoreductase Putative enzymes putative enzyme; Not classified b4359 7464 7327 1.02 0.008 5801 4881 1.19 0.075 7395 5341 0.043638 0.032155 J24 1 1 1245 1.36 0.133 mdoB b4359 phosphoglycerol transferase I Cell processes enzyme; Osmotic adaptation b4360 811 715 1.13 0.055 745 762 -1.02 -0.010 763 753 0.004504 0.004535 K14 3 1 630 -1.01 -0.003 yjjA b4360 putative glycoprotein/receptor Putative factors putative factor; Not classified b4361 2436 2867 -1.18 -0.071 2253 2290 -1.02 -0.007 2652 2272 0.015646 0.013676 C19 1 2 1610 1.14 0.058 dnaC b4361 chromosome replication; initiation and chain elongation "DNA replication, repair, restriction/modification" "putative enzyme; DNA - replication, repair, restriction/modification" b4362 1355 1265 1.07 0.030 1368 1402 -1.02 -0.011 1310 1385 0.007730 0.008338 E19 1 2 1611 -1.08 -0.033 dnaT b4362 DNA biosynthesis; primosomal protein i "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b4363 79 67 1.00 0.000 16 112 -1.00 0.000 73 64 0.000432 0.000385 D14 1 3 4274 1.00 0.000 yjjB b4363 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4364 1930 1953 -1.01 -0.005 1086 1221 -1.12 -0.051 1942 1153 0.011458 0.006944 M14 3 1 631 1.65 0.218 yjjP b4364 putative structural protein Putative cell structure putative structure; Not classified b4365 294 36 1.00 0.000 40 127 -1.00 0.000 165 83 0.000973 0.000500 C5 4 1 306 1.00 0.000 yjjQ b4365 putative regulator Putative regulatory proteins putative regulator; Not classified b4366 419 376 1.00 0.000 240 413 -1.00 0.000 397 326 0.002344 0.001965 E5 4 1 307 1.00 0.000 bglJ b4366 2-component transcriptional regulator Regulatory function regulator; Not classified b4367 2059 2396 -1.16 -0.066 915 970 -1.06 -0.025 2227 942 0.013143 0.005674 F14 1 3 4275 2.32 0.365 fhuF b4367 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4371 4753 4453 1.07 0.028 2621 3015 -1.15 -0.061 4603 2818 0.027161 0.016964 H9 4 2 2628 1.60 0.204 yjjT b4371 putative enzyme Putative enzymes putative enzyme; Not classified b4372 1035 951 1.09 0.037 1632 1536 1.06 0.026 993 1584 0.005858 0.009537 G19 1 2 1612 -1.63 -0.212 holD b4372 "DNA polymerase III, psi subunit" "DNA replication, repair, restriction/modification" "enzyme; DNA - replication, repair, restriction/modification" b4373 992 879 1.13 0.053 1043 997 1.05 0.020 935 1020 0.005520 0.006143 M5 4 2 1847 -1.11 -0.046 rimI b4373 acyltransferase for 30S ribosomal subunit protein S18; acetylation of N-terminal alanine "Translation, post-translational modification" enzyme; Ribosomes - maturation and modification b4374 1985 2460 -1.24 -0.093 1964 2250 -1.15 -0.059 2223 2107 0.013115 0.012685 J9 4 2 2629 1.03 0.014 yjjG b4374 putative phosphatase Putative enzymes putative enzyme; Not classified b4375 6656 7618 -1.14 -0.059 12761 12442 1.03 0.011 7137 12602 0.042113 0.075870 O5 4 2 1848 -1.80 -0.256 prfC b4375 peptide chain release factor RF-3 "Translation, post-translational modification" factor; Proteins - translation and modification b4376 4044 3547 1.14 0.057 1090 866 1.26 0.100 3795 978 0.022396 0.005886 L24 1 1 1246 3.80 0.580 osmY b4376 hyperosmotically inducible periplasmic protein Cell processes phenotype; Osmotic adaptation b4377 806 853 -1.06 -0.025 278 213 1.00 0.000 829 246 0.004894 0.001479 H14 1 3 4276 1.63 0.213 yjjU b4377 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4378 495 413 1.00 0.000 189 359 -1.00 0.000 454 274 0.002679 0.001652 J14 1 3 4277 1.00 0.000 yjjV b4378 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4379 542 579 -1.07 -0.029 434 571 -1.14 -0.057 560 503 0.003307 0.003026 D16 4 1 1498 1.09 0.039 yjjW b4379 putative activating enzyme Putative enzymes putative enzyme; Not classified b4380 279 424 -1.00 0.000 373 414 -1.00 0.000 351 394 0.002074 0.002371 L14 1 3 4278 -1.00 0.000 yjjI b4380 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4381 767 1048 -1.37 -0.135 1368 1595 -1.17 -0.067 908 1481 0.005356 0.008917 G6 2 2 2036 -1.66 -0.221 deoC b4381 2-deoxyribose-5-phosphate aldolase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b4382 845 1576 -1.87 -0.271 495 772 -1.54 -0.189 1211 634 0.007143 0.003815 I6 2 2 2037 1.87 0.272 deoA b4382 thymidine phosphorylase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b4383 771 1052 -1.36 -0.135 1166 928 1.26 0.099 912 1047 0.005380 0.006303 K6 2 2 2038 -1.17 -0.069 deoB b4383 phosphopentomutase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b4384 1837 2099 -1.14 -0.058 3131 2954 1.06 0.025 1968 3043 0.011613 0.018319 M6 2 2 2039 -1.58 -0.198 deoD b4384 purine-nucleoside phosphorylase Nucleotide biosynthesis and metabolism enzyme; Salvage of nucleosides and nucleotides b4385 411 746 -1.49 -0.174 605 696 -1.15 -0.061 579 650 0.003416 0.003916 N14 1 3 4279 -1.15 -0.059 yjjJ b4385 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4386 41217 38303 1.08 0.032 17971 18951 -1.05 -0.023 39760 18461 0.234611 0.111147 A7 4 2 1849 2.11 0.324 lplA b4386 lipoate-protein ligase A Cell structure "enzyme; Macromolecule synthesis, modification: Lipoprotein" b4387 5781 4181 1.38 0.141 2349 2402 -1.02 -0.010 4981 2376 0.029390 0.014303 P14 1 3 4280 2.05 0.313 smp b4387 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4388 4363 3949 1.10 0.043 2877 2695 1.07 0.028 4156 2786 0.024525 0.016771 G16 1 2 1980 1.46 0.165 serB b4388 3-phosphoserine phosphatase Amino acid biosynthesis enzyme; Amino acid biosynthesis: Serine b4389 1935 1833 1.06 0.023 1706 1856 -1.09 -0.037 1884 1781 0.011115 0.010722 C7 4 2 1850 1.04 0.016 sms b4389 probable ATP-dependent protease Putative enzymes "putative enzyme; Degradation of proteins, peptides, glyco" b4390 21576 21681 -1.00 -0.002 9999 9988 1.00 0.000 21629 9994 0.127624 0.060167 D19 1 2 2378 2.12 0.327 nadR b4390 probable nadAB transcriptional regulator Regulatory function "putative regulator; Biosynthesis of cofactors, carriers: Pyridine nucleotide" b4391 2537 2020 1.26 0.099 2086 1977 1.06 0.023 2279 2032 0.013446 0.012232 B16 1 3 4281 1.10 0.041 yjjK b4391 putative ATP-binding component of a transport system Putative transport proteins putative transport; Not classified b4392 5388 5983 -1.11 -0.046 8191 7441 1.10 0.042 5685 7816 0.033548 0.047057 O24 2 1 576 -1.40 -0.147 slt b4392 soluble lytic murein transglycosylase Cell structure "enzyme; Murein sacculus, peptidoglycan" b4393 1316 1322 -1.00 -0.002 664 419 1.33 0.123 1319 542 0.007783 0.003260 I16 1 2 1981 2.39 0.378 trpR b4393 regulator for trp operon and aroH; trp aporepressor Regulatory function regulator; Amino acid biosynthesis: Tryptophan b4394 1149 988 1.16 0.065 594 578 1.03 0.012 1068 586 0.006305 0.003528 D16 1 3 4282 1.79 0.252 yjjX b4394 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4395 683 857 -1.25 -0.098 492 576 -1.15 -0.061 770 534 0.004544 0.003213 F16 1 3 4283 1.41 0.151 gpmB b4395 phosphoglyceromutase 2 Central intermediary metabolism "enzyme; Energy metabolism, carbon: Glycolysis" b4396 2034 2204 -1.08 -0.035 1448 1489 -1.03 -0.012 2119 1469 0.012503 0.008842 I19 1 2 1613 1.41 0.150 rob b4396 right origin-binding protein "DNA replication, repair, restriction/modification" "factor; DNA - replication, repair, restriction/modification" b4397 304 352 -1.00 0.000 -7 53 -1.00 0.000 328 23 0.001937 0.000139 H16 1 3 4284 1.00 0.000 creA b4397 "orf, hypothetical protein" Putative regulatory proteins orf; Unknown b4398 104 209 -1.00 0.000 180 178 1.00 0.000 156 179 0.000922 0.001076 G19 2 1 172 -1.00 0.000 creB b4398 catabolic regulation response regulator Regulatory function regulator; Global regulatory functions b4399 350 735 -1.47 -0.167 -361 447 -1.00 0.000 542 43 0.003200 0.000259 I19 2 1 173 1.07 0.028 creC b4399 catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon Regulatory function enzyme; Global regulatory functions b4400 886 931 -1.05 -0.022 411 148 1.00 0.000 908 280 0.005359 0.001684 C4 1 1 394 1.79 0.252 creD b4400 tolerance to colicin E2 Putative regulatory proteins putative membrane; Colicin-related functions b4401 824 1592 -1.93 -0.286 358 611 -1.22 -0.087 1208 484 0.007129 0.002915 K19 2 1 174 2.38 0.376 arcA b4401 "negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)" Regulatory function regulator; Global regulatory functions b4402 697 739 -1.06 -0.026 565 442 1.13 0.053 718 503 0.004237 0.003031 J16 1 3 4285 1.40 0.146 yjjY b4402 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4403 454 211 1.00 0.000 320 333 -1.00 0.000 332 327 0.001962 0.001967 L16 1 3 4286 -1.00 0.000 lasT b4403 "orf, hypothetical protein" "Hypothetical, unclassified, unknown" orf; Unknown b4404 225 156 1.00 0.000 195 120 1.00 0.000 191 157 0.001125 0.000947 B18 1 3 4289 1.00 0.000 yifM b4404 "orf, conceptual translation in SwissProt is fused with b4405" "Hypothetical, unclassified, unknown" orf; Unknown b4405 3191 3121 1.02 0.010 3242 3525 -1.09 -0.036 3156 3383 0.018623 0.020369 D18 1 3 4290 -1.09 -0.039 yifM b4405 "orf, conceptual translation in SwissProt is fused with b4404" "Hypothetical, unclassified, unknown" orf; Unknown